Chain A from PDB Type:PROTEIN Length:381
aligned with NAGA_ECO57 | P0AF19 from UniProtKB/Swiss-Prot Length:382
Alignment length:382
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
NAGA_ECO57 1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
SCOP domains d1yrra1 A:1-53,A:351-382 d1yrra2 A:54-350 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain d1yrra1 A:1-53,A:351-382 SCOP domains
CATH domains 1yrrA01 A:1-54,A:345-382 Urease, subunit C, domain 1 1yrrA02 A:55-280,A:281-344 Metal-dependent hydrolases 1yrrA02 A:55-280,A:281-344 Metal-dependent hydrolases 1yrrA01 A:1-54,A:345-382 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee..eee....ee..eeeeee..eeeeeee.hhh....eeee....eeee.eeeeee.ee..ee........hhhhhhhhhhhhhhh.eeeeeeeee..hhhhhhhhhhhhhhhhhhh......eeee.........-.......hhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhh..ee..............hhhhhhhhhh...eeeee......hhhhhhhhhhhhh..eeee............eeee..eeeee....ee.....eee...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh................eeee.....eeeeee..eeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yrr A 1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKK-THNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
140 |
142
Chain A from PDB Type:PROTEIN Length:381
aligned with NAGA_ECOLI | P0AF18 from UniProtKB/Swiss-Prot Length:382
Alignment length:382
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
NAGA_ECOLI 1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
SCOP domains d1yrra1 A:1-53,A:351-382 d1yrra2 A:54-350 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain d1yrra1 A:1-53,A:351-382 SCOP domains
CATH domains 1yrrA01 A:1-54,A:345-382 Urease, subunit C, domain 1 1yrrA02 A:55-280,A:281-344 Metal-dependent hydrolases 1yrrA02 A:55-280,A:281-344 Metal-dependent hydrolases 1yrrA01 A:1-54,A:345-382 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee..eee....ee..eeeeee..eeeeeee.hhh....eeee....eeee.eeeeee.ee..ee........hhhhhhhhhhhhhhh.eeeeeeeee..hhhhhhhhhhhhhhhhhhh......eeee.........-.......hhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhh..ee..............hhhhhhhhhh...eeeee......hhhhhhhhhhhhh..eeee............eeee..eeeee....ee.....eee...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh................eeee.....eeeeee..eeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yrr A 1 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKK-THNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
140 |
142
Chain B from PDB Type:PROTEIN Length:334
aligned with NAGA_ECO57 | P0AF19 from UniProtKB/Swiss-Prot Length:382
Alignment length:381
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381
NAGA_ECO57 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
SCOP domains d1yrrb1 B:2-53,B:351-382 d1yrrb2 B:54-350 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domai n d1yrrb1 B:2-53,B:351-382 SCOP domains
CATH domains 1yrrB01 B:2-54,B:346-382 Urease, subunit C, domain 1 1yrrB02 B:55-345 Metal-dependent hydrolases 1yrrB01 B:2-54,B:346-382 CATH domains
Pfam domains (1) ------------------------------------------------Amidohydro_1-1yrrB01 B:50-364 ------------------ Pfam domains (1)
Pfam domains (2) ------------------------------------------------Amidohydro_1-1yrrB02 B:50-364 ------------------ Pfam domains (2)
Sec.struct. author eeee..eee....ee..eeeeee..eeeeeee.hhh.....eee....eeee.eeeeee.ee..ee........hhhhhhhhhhhhhh..eeeeeeee...hhhhhhhhhhhhhhhhhhh......eeee.....----------------hhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhheeee..............hhhhhhhhhh...eeeee......hhhhhhhhhhhhh..eeee....-------------------------------.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh................eeee.....eeeeee..eeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yrr B 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN----------------AALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDAT-------------------------------SGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
11 21 31 41 51 61 71 81 91 101 111 121 131 | - - | 161 171 181 191 201 211 221 231 241 251 261 271 | - - - | 311 321 331 341 351 361 371 381
136 153 275 307
Chain B from PDB Type:PROTEIN Length:334
aligned with NAGA_ECOLI | P0AF18 from UniProtKB/Swiss-Prot Length:382
Alignment length:381
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381
NAGA_ECOLI 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
SCOP domains d1yrrb1 B:2-53,B:351-382 d1yrrb2 B:54-350 N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domai n d1yrrb1 B:2-53,B:351-382 SCOP domains
CATH domains 1yrrB01 B:2-54,B:346-382 Urease, subunit C, domain 1 1yrrB02 B:55-345 Metal-dependent hydrolases 1yrrB01 B:2-54,B:346-382 CATH domains
Pfam domains (1) ------------------------------------------------Amidohydro_1-1yrrB01 B:50-364 ------------------ Pfam domains (1)
Pfam domains (2) ------------------------------------------------Amidohydro_1-1yrrB02 B:50-364 ------------------ Pfam domains (2)
Sec.struct. author eeee..eee....ee..eeeeee..eeeeeee.hhh.....eee....eeee.eeeeee.ee..ee........hhhhhhhhhhhhhh..eeeeeeee...hhhhhhhhhhhhhhhhhhh......eeee.....----------------hhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhheeee..............hhhhhhhhhh...eeeee......hhhhhhhhhhhhh..eeee....-------------------------------.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh................eeee.....eeeeee..eeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yrr B 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLN----------------AALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDAT-------------------------------SGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ 382
11 21 31 41 51 61 71 81 91 101 111 121 131 | - - | 161 171 181 191 201 211 221 231 241 251 261 271 | - - - | 311 321 331 341 351 361 371 381
136 153 275 307
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |