Chain A from PDB Type:PROTEIN Length:109
aligned with SSPB_ECOLI | P0AFZ3 from UniProtKB/Swiss-Prot Length:165
Alignment length:109
12 22 32 42 52 62 72 82 92 102
SSPB_ECOLI 3 LSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
SCOP domains d1yfna_ A: automated matches SCOP domains
CATH domains 1yfnA00 A:3-111 Stringent starvation protein B, SspB CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......hhhhhhhhhhhhhhhh...eeeeee........hhhhh...eeeee.hhhhheeeee...eeeeeeee..eeeeeeee...eeeeee.....eee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------- Transcript
1yfn A 3 LSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
12 22 32 42 52 62 72 82 92 102
Chain B from PDB Type:PROTEIN Length:107
aligned with SSPB_ECOLI | P0AFZ3 from UniProtKB/Swiss-Prot Length:165
Alignment length:107
14 24 34 44 54 64 74 84 94 104
SSPB_ECOLI 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
SCOP domains d1yfnb_ B: automated matches SCOP domains
CATH domains 1yfnB00 B:5-111 Stringent starvation protein B, SspB CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhh....eeeeee........hhhhh...eeeee.hhhhheeeee...eeeeeeee..eeeeeeee...eeeeee.....eee........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1yfn B 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
14 24 34 44 54 64 74 84 94 104
Chain C from PDB Type:PROTEIN Length:107
aligned with SSPB_ECOLI | P0AFZ3 from UniProtKB/Swiss-Prot Length:165
Alignment length:107
14 24 34 44 54 64 74 84 94 104
SSPB_ECOLI 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
SCOP domains d1yfnc_ C: automated matches SCOP domains
CATH domains 1yfnC00 C:5-111 Stringent starvation protein B, SspB CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhh....eeeeee........hhhhh...eeeee.hhhhheeeee...eeeeeeee..eeeeeeee...eeeeee.....eee...hhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1yfn C 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
14 24 34 44 54 64 74 84 94 104
Chain D from PDB Type:PROTEIN Length:107
aligned with SSPB_ECOLI | P0AFZ3 from UniProtKB/Swiss-Prot Length:165
Alignment length:107
14 24 34 44 54 64 74 84 94 104
SSPB_ECOLI 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
SCOP domains d1yfnd_ D: automated matches SCOP domains
CATH domains 1yfnD00 D:5-111 Stringent starvation protein B, SspB CATH domains
Pfam domains (1) SspB-1yfnD01 D:5-111 Pfam domains (1)
Pfam domains (2) SspB-1yfnD02 D:5-111 Pfam domains (2)
Pfam domains (3) SspB-1yfnD03 D:5-111 Pfam domains (3)
Pfam domains (4) SspB-1yfnD04 D:5-111 Pfam domains (4)
Sec.struct. author ....hhhhhhhhhhhhhhhh...eeeeee........hhhhh...eeeee.hhhhheeeee...eeeeeeee..eeeeeeee...eeeeee.....eee........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1yfn D 5 QLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYD 111
14 24 34 44 54 64 74 84 94 104
Chain E from PDB Type:PROTEIN Length:18
aligned with RSEA_ECOL6 | P0AFX8 from UniProtKB/Swiss-Prot Length:216
Alignment length:18
86
RSEA_ECOL6 77 EAQPAPHQWQKMPFWQKV 94
SCOP domains ------------------ SCOP domains
CATH domains ------------------ CATH domains
Pfam domains ------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------ SAPs(SNPs)
PROSITE ------------------ PROSITE
Transcript ------------------ Transcript
1yfn E 1 EAQPAPHQWQKMPFWQKV 18
10
Chain E from PDB Type:PROTEIN Length:18
aligned with RSEA_ECOLI | P0AFX7 from UniProtKB/Swiss-Prot Length:216
Alignment length:18
86
RSEA_ECOLI 77 EAQPAPHQWQKMPFWQKV 94
SCOP domains ------------------ SCOP domains
CATH domains ------------------ CATH domains
Pfam domains ------------------ Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------ SAPs(SNPs)
PROSITE ------------------ PROSITE
Transcript ------------------ Transcript
1yfn E 1 EAQPAPHQWQKMPFWQKV 18
10
Chain F from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOL6 | P0AFX8 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOL6 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains --------------- Pfam domains
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn F 1 EAQPAPHQWQKMPFW 15
10
Chain F from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOLI | P0AFX7 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOLI 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains --------------- Pfam domains
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn F 1 EAQPAPHQWQKMPFW 15
10
Chain G from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOL6 | P0AFX8 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOL6 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains --------------- Pfam domains
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn G 1 EAQPAPHQWQKMPFW 15
10
Chain G from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOLI | P0AFX7 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOLI 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains --------------- Pfam domains
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn G 1 EAQPAPHQWQKMPFW 15
10
Chain H from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOL6 | P0AFX8 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOL6 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains (1) RseA_N-1yfnH0-- Pfam domains (1)
Pfam domains (2) RseA_N-1yfnH0-- Pfam domains (2)
Pfam domains (3) RseA_N-1yfnH0-- Pfam domains (3)
Pfam domains (4) RseA_N-1yfnH0-- Pfam domains (4)
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn H 1 EAQPAPHQWQKMPFW 15
10
Chain H from PDB Type:PROTEIN Length:15
aligned with RSEA_ECOLI | P0AFX7 from UniProtKB/Swiss-Prot Length:216
Alignment length:15
86
RSEA_ECOLI 77 EAQPAPHQWQKMPFW 91
SCOP domains --------------- SCOP domains
CATH domains --------------- CATH domains
Pfam domains (1) RseA_N-1yfnH0-- Pfam domains (1)
Pfam domains (2) RseA_N-1yfnH0-- Pfam domains (2)
Pfam domains (3) RseA_N-1yfnH0-- Pfam domains (3)
Pfam domains (4) RseA_N-1yfnH0-- Pfam domains (4)
Sec.struct. author ....hhhhhh..... Sec.struct. author
SAPs(SNPs) --------------- SAPs(SNPs)
PROSITE --------------- PROSITE
Transcript --------------- Transcript
1yfn H 1 EAQPAPHQWQKMPFW 15
10
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |