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Summary Information (see also Sequences/Alignments below) |
(no "Ligand,Modified Residues,Ions" information available for 1VGW) |
(no "Site" information available for 1VGW) |
(no "SS Bond" information available for 1VGW) |
Asymmetric Unit
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(no "SAP(SNP)/Variant" information available for 1VGW) |
Asymmetric Unit (1, 6)
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(no "Exon" information available for 1VGW) |
Asymmetric UnitChain A from PDB Type:PROTEIN Length:212 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:226 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 ISPD_NEIG1 2 KRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwa_ A: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwA00 A:2 -227 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vgw A 2 KRKNIALIPAA----------PKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAA----GITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 11| - | 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 | 191 201 211 221 12 23 181 186 Chain B from PDB Type:PROTEIN Length:214 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:227 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ISPD_NEIG1 1 MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwb_ B: 4 -diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwB00 B:1- 227 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vgw B 1 LKRKNIALIPAA-----------KQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAA--LGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 10 | - | 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180| | 190 200 210 220 12 24 181 | 184 Chain C from PDB Type:PROTEIN Length:214 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:228 1 | 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 ISPD_NEIG1 - -MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwc_ C: 4-d iphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwC00 C:0-22 7 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1vgw C 0 SLKRKNIALIPAAG---------PKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAA-----ITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 9 | - | 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 | 189 199 209 219 13 23 181 187 Chain D from PDB Type:PROTEIN Length:211 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:225 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 ISPD_NEIG1 3 RKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwd_ D: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwD00 D: 3-227 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vgw D 3 RKNIALIPAA----------PKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAA----GITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 12 -| 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 |- | 192 202 212 222 12 23 181 186 Chain E from PDB Type:PROTEIN Length:213 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:228 1 | 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 ISPD_NEIG1 - -MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwe_ E: 4-d iphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwE00 E:0-22 7 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1vgw E 0 SLKRKNIALIPAAG---------PKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALA------ITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 9 | - | 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179| 189 199 209 219 13 23 180 187 Chain F from PDB Type:PROTEIN Length:209 aligned with ISPD_NEIG1 | Q5F829 from UniProtKB/Swiss-Prot Length:229 Alignment length:226 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 ISPD_NEIG1 2 KRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALAAENLGGITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLN 227 SCOP domains d1vgwf_ F: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) SCOP domains CATH domains 1vgwF00 F:2 -227 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A CATH domains Pfam domains (1) ---IspD-1vg wF01 F:5-227 Pfam domains (1) Pfam domains (2) ---IspD-1vg wF02 F:5-227 Pfam domains (2) Pfam domains (3) ---IspD-1vg wF03 F:5-227 Pfam domains (3) Pfam domains (4) ---IspD-1vg wF04 F:5-227 Pfam domains (4) Pfam domains (5) ---IspD-1vg wF05 F:5-227 Pfam domains (5) Pfam domains (6) ---IspD-1vg wF06 F:5-227 Pfam domains (6) SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------ISPD ------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vgw F 2 KRKNIALIPAA------------QYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSGLWQAQTPQLFQAGLLHRALA-----GITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLLD 227 11| - | 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 |- | 191 201 211 221 12 25 180 186
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Asymmetric Unit |
Asymmetric Unit |
Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,B,C,D,E,F (ISPD_NEIG1 | Q5F829)
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