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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRIT SYNTHASE
Keywords STRUCTURAL GENOMICS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VGW     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 212 1584 0
2  Protein    B 214 1609 0
3  Protein    C 214 1603 0
4  Protein    D 211 1587 0
5  Protein    E 213 1595 0
6  Protein    F 209 1569 0
7 Water     257 0 257
total       1530 9547 257

Proteins
Unit 1 LYS2 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 PRO23 LYS24 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 ALA181 GLY186 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227
Unit 2 LEU1 LYS2 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 LYS24 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 ALA181 LEU184 GLY185 GLY186 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227
Unit 3 SER0 LEU1 LYS2 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 GLY13 PRO23 LYS24 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 ALA181 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227
Unit 4 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 PRO23 LYS24 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 ALA181 GLY186 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227
Unit 5 SER0 LEU1 LYS2 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 GLY13 PRO23 LYS24 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227
Unit 6 LYS2 ARG3 LYS4 ASN5 ILE6 ALA7 LEU8 ILE9 PRO10 ALA11 ALA12 GLN25 TYR26 VAL27 GLU28 ILE29 GLY30 SER31 LYS32 THR33 VAL34 LEU35 GLU36 HIS37 VAL38 LEU39 GLY40 ILE41 PHE42 GLU43 ARG44 HIS45 GLU46 ALA47 VAL48 ASP49 LEU50 THR51 VAL52 VAL53 VAL54 VAL55 SER56 PRO57 GLU58 ASP59 THR60 PHE61 ALA62 ASP63 LYS64 VAL65 GLN66 THR67 ALA68 PHE69 PRO70 GLN71 VAL72 ARG73 VAL74 TRP75 LYS76 ASN77 GLY78 GLY79 GLN80 THR81 ARG82 ALA83 GLU84 THR85 VAL86 ARG87 ASN88 GLY89 VAL90 ALA91 LYS92 LEU93 LEU94 GLU95 THR96 GLY97 LEU98 ALA99 ALA100 GLU101 THR102 ASP103 ASN104 ILE105 LEU106 VAL107 HIS108 ASP109 ALA110 ALA111 ARG112 CYS113 CYS114 LEU115 PRO116 SER117 GLU118 ALA119 LEU120 ALA121 ARG122 LEU123 ILE124 GLU125 GLN126 ALA127 GLY128 ASN129 ALA130 ALA131 GLU132 GLY133 GLY134 ILE135 LEU136 ALA137 VAL138 PRO139 VAL140 ALA141 ASP142 THR143 LEU144 LYS145 ARG146 ALA147 GLU148 SER149 GLY150 GLN151 ILE152 SER153 ALA154 THR155 VAL156 ASP157 ARG158 SER159 GLY160 LEU161 TRP162 GLN163 ALA164 GLN165 THR166 PRO167 GLN168 LEU169 PHE170 GLN171 ALA172 GLY173 LEU174 LEU175 HIS176 ARG177 ALA178 LEU179 ALA180 GLY186 ILE187 THR188 ASP189 GLU190 ALA191 SER192 ALA193 VAL194 GLU195 LYS196 LEU197 GLY198 VAL199 ARG200 PRO201 LEU202 LEU203 ILE204 GLN205 GLY206 ASP207 ALA208 ARG209 ASN210 LEU211 LYS212 LEU213 THR214 GLN215 PRO216 GLN217 ASP218 ALA219 TYR220 ILE221 VAL222 ARG223 LEU224 LEU225 LEU226 ASP227

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany