Chain A from PDB Type:PROTEIN Length:106
aligned with CEA9_ECOLX | P09883 from UniProtKB/Swiss-Prot Length:582
Alignment length:129
460 470 480 490 500 510 520 530 540 550 560 570
CEA9_ECOLX 451 SKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIH 579
SCOP domains d1v15a_ A: DNase domain of colic in E9 SCOP domains
CATH domains 1v15A00 A:3-131 Colicin e7 immun ity protein. Chain B CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ................................-------------.hhhhhhhhhhhhhhhh.----------hhhhhhh.....hhhhh.......eeee...............eeeehhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
1v15 A 3 SKRNKPGKATGKGKPVGDKWLDDAGKDSGAPI-------------KSFDDFRKAVWEEVSKDP----------KSSVSKGYSPFTPKNQQVGGRKVYELHADKPISQGGEVYDMDNIRVTTPKRHIDIH 131
12 22 32 | - | 52 62 | - | 82 92 102 112 122
34 48 65 76
Chain B from PDB Type:PROTEIN Length:134
aligned with CEA9_ECOLX | P09883 from UniProtKB/Swiss-Prot Length:582
Alignment length:134
458 468 478 488 498 508 518 528 538 548 558 568 578
CEA9_ECOLX 449 KESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRGK 582
SCOP domains d1v15b_ B: DNase domain of colicin E9 SCOP domains
CATH domains 1v15B00 B:1-134 Colicin e7 immunity protein. Chain B CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........ee........hhhhhhhhhh...ee.hhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh......hhhhh.......eeee...............eeeehhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v15 B 1 MESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHADKPISQGGEVYDMDNIRVTTPKRHIDIHRGK 134
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain C from PDB Type:PROTEIN Length:129
aligned with CEA9_ECOLX | P09883 from UniProtKB/Swiss-Prot Length:582
Alignment length:129
460 470 480 490 500 510 520 530 540 550 560 570
CEA9_ECOLX 451 SKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIH 579
SCOP domains d1v15c_ C: DNase domain of colicin E9 SCOP domains
CATH domains 1v15C00 C:3-131 Colicin e7 immunity protein. Chain B CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......ee.............hhhhh......hhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh......hhhhh.......eeee...............eeeehhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
1v15 C 3 SKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHADKPISQGGEVYDMDNIRVTTPKRHIDIH 131
12 22 32 42 52 62 72 82 92 102 112 122
Chain D from PDB Type:PROTEIN Length:133
aligned with CEA9_ECOLX | P09883 from UniProtKB/Swiss-Prot Length:582
Alignment length:133
459 469 479 489 499 509 519 529 539 549 559 569 579
CEA9_ECOLX 450 ESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHRGK 582
SCOP domains d1v15d_ D: DNase domain of colicin E9 SCOP domains
CATH domains 1v15D00 D:2-134 Colicin e7 immunity protein. Chain B CATH domains
Pfam domains (1) -Colicin-DNase-1v15D01 D:3-133 - Pfam domains (1)
Pfam domains (2) -Colicin-DNase-1v15D02 D:3-133 - Pfam domains (2)
Pfam domains (3) -Colicin-DNase-1v15D03 D:3-133 - Pfam domains (3)
Pfam domains (4) -Colicin-DNase-1v15D04 D:3-133 - Pfam domains (4)
Sec.struct. author .......ee..........hhhhhhhh......hhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh......hhhhh.......eeee...............eeeehhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v15 D 2 ESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHADKPISQGGEVYDMDNIRVTTPKRHIDIHRGK 134
11 21 31 41 51 61 71 81 91 101 111 121 131
Chain E from PDB Type:DNA Length:7
1v15 E 2 CGATCGC 8
Chain F from PDB Type:DNA Length:8
1v15 F 9 GCGATCGC 16
Chain G from PDB Type:DNA Length:6
1v15 G 3 GATCGC 8
Chain H from PDB Type:DNA Length:8
1v15 H 9 GCGATCGC 16
Chain I from PDB Type:DNA Length:7
1v15 I 2 CGATCGC 8
Chain J from PDB Type:DNA Length:8
1v15 J 9 GCGATCGC 16
Chain K from PDB Type:DNA Length:6
1v15 K 3 GATCGC 8
Chain L from PDB Type:DNA Length:8
1v15 L 9 GCGATCGC 16
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |