Chain E from PDB Type:PROTEIN Length:211
SCOP domains d1uz6e1 E:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa -d1uz6e2 E:107-210 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 1uz6E01 E:1-107 Immunoglobulins 1uz6E02 E:108-210 Immunoglobulins - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee.......ee....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...ee..ee......eeeee..hhhhhh..eeeeeeeeeee......eeeee..ee....eeeee.........eeeeeeeeeehhhhhhh.eeeeee..eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 E 1 DIVMTQAAFSNPVTLGTSASISCRSSKSLLYSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLEVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATPIVKSFNRN 211
10 20 27C|| 35 45 55 65 75 85 95 105 | 114 124 134 144 154 164 174 184 194 || 210
27A|||| 106A 196|
27B||| 203
27C||
27D|
27E
Chain F from PDB Type:PROTEIN Length:209
aligned with HVM41_MOUSE | P01811 from UniProtKB/Swiss-Prot Length:117
Alignment length:209
117
10 20 30 40 50 60 70 80 90 100 110 | - - - - - - - - -
HVM41_MOUSE 1 EVKLLESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPFLKDKFIISRDNAKNTLFLQMSKVRSEDTALYFCARNWDVGFDYWGQVTTLTVSS-------------------------------------------------------------------------------------------- -
SCOP domains d1uz6f1 F:1-113 Immunoglobulin heavy chain variable domain, VH d1uz6f2 F:114-212 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma - SCOP domains
CATH domains 1uz6F01 F:1-112 Immunoglobulins -1uz6F02 F:114-213 Immunoglobulins CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeee.......ee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeee..........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 F 1 EVKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETGTRFDYWGQGTTLTVSSATTTAPSVYPLVPSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKRIEPR 213
10 20 30 40 50 | 59 69 79 ||| 86 96 106 116 126| 144 154 164 174 184 194 204
52A 82A|| 126|
82B| 135
82C
Chain H from PDB Type:PROTEIN Length:211
aligned with HVM41_MOUSE | P01811 from UniProtKB/Swiss-Prot Length:117
Alignment length:211
117
10 20 30 40 50 60 70 80 90 100 110 | - - - - - - - - - -
HVM41_MOUSE 1 EVKLLESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPFLKDKFIISRDNAKNTLFLQMSKVRSEDTALYFCARNWDVGFDYWGQVTTLTVSS---------------------------------------------------------------------------------------------- -
SCOP domains d1uz6h1 H:1-113 Immunoglobulin heavy chain variable domain, VH d1uz6h2 H:114-212 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma - SCOP domains
CATH domains 1uz6H01 H:1-112 Immunoglobulins -1uz6H02 H:114-213 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeeeehhh.eeeeee...hhhhheeeeeee.......ee...eeeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 H 1 EVKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETGTRFDYWGQGTTLTVSSATTTAPSVYPLVPGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKRIEPR 213
10 20 30 40 50 | 59 69 79 ||| 86 96 106 116 126| 142 152 162 172 182 192 202 212
52A 82A|| 126|
82B| 133
82C
Chain L from PDB Type:PROTEIN Length:211
SCOP domains d1uz6l1 L:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa -d1uz6l2 L:107-210 Immunoglobulin light chain kappa constant domain, CL-kappa - SCOP domains
CATH domains 1uz6L01 L:1-107 Immunoglobulins 1uz6L02 L:108-210 Immunoglobulins - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee.......ee....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee......ee...ee..ee......eeeee..hhhhhh..eeeeeeeeeee......eeeee..eee...eeeee.........eeeeeeeeeehhhhhhh.eeeeee..eeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 L 1 DIVMTQAAFSNPVTLGTSASISCRSSKSLLYSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLEVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATPIVKSFNRN 211
10 20 27C|| 35 45 55 65 75 85 95 105 | 114 124 134 144 154 164 174 184 194 || 210
27A|||| 106A 196|
27B||| 203
27C||
27D|
27E
Chain M from PDB Type:PROTEIN Length:212
SCOP domains d1uz6m1 M:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa -d1uz6m2 M:107-210 Immunoglobulin light chain kappa constant domain, CL-kappa -- SCOP domains
CATH domains 1uz6M01 M:1-107 Immunoglobulins 1uz6M02 M:108-210 Immunoglobulins -- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee...eeeeee....eeeeeee............eeeeee.....eeeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eeeeee......eeeee..hhhhhhh.eeeeeeeeeee......eeeee..eee...eeeee.........eeeeeeeeeehhhhhh..eeeeee..eeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 M 1 DIVMTQAAFSNPVTLGTSASISCRSSKSLLYSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLEVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATPIVKSFNRNR 212
10 20 27C|| 35 45 55 65 75 85 95 105 | 114 124 134 144 154 164 174 184 194 || 210
27A|||| 106A 196|
27B||| 203
27C||
27D|
27E
Chain P from PDB Type:PROTEIN Length:212
aligned with HVM41_MOUSE | P01811 from UniProtKB/Swiss-Prot Length:117
Alignment length:212
117
10 20 30 40 50 60 70 80 90 100 110 | - - - - - - - - - -
HVM41_MOUSE 1 EVKLLESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPFLKDKFIISRDNAKNTLFLQMSKVRSEDTALYFCARNWDVGFDYWGQVTTLTVSS----------------------------------------------------------------------------------------------- -
SCOP domains d1uz6p1 P:1-113 Immunoglobulin heavy chain variable domain, VH d1uz6p2 P:114-212 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma - SCOP domains
CATH domains 1uz6P01 P:1-112 Immunoglobulins -1uz6P02 P:114-213 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeee.......ee...eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 P 1 EVKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETGTRFDYWGQGTTLTVSSATTTAPSVYPLVPSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKRIEPR 213
10 20 30 40 50 | 59 69 79 ||| 86 96 106 116 126| 141 151 161 171 181 191 201 211
52A 82A|| 126|
82B| 132
82C
Chain V from PDB Type:PROTEIN Length:212
SCOP domains d1uz6v1 V:1-106 Immunoglobulin light chain kappa variable domain, VL-kappa -d1uz6v2 V:107-210 Immunoglobulin light chain kappa constant domain, CL-kappa -- SCOP domains
CATH domains 1uz6V01 V:1-107 Immunoglobulins 1uz6V02 V:108-210 Immunoglobulins -- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...ee.......ee....eeeeeee............eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeee......ee...eee.ee......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhh..eeeeeee.eeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 V 1 DIVMTQAAFSNPVTLGTSASISCRSSKSLLYSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLEVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATPIVKSFNRNR 212
10 20 27C|| 35 45 55 65 75 85 95 105 | 114 124 134 144 154 164 174 184 194 || 210
27A|||| 106A 196|
27B||| 203
27C||
27D|
27E
Chain W from PDB Type:PROTEIN Length:212
aligned with HVM41_MOUSE | P01811 from UniProtKB/Swiss-Prot Length:117
Alignment length:212
117
10 20 30 40 50 60 70 80 90 100 110 | - - - - - - - - - -
HVM41_MOUSE 1 EVKLLESGGGLVQPGGSLKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPFLKDKFIISRDNAKNTLFLQMSKVRSEDTALYFCARNWDVGFDYWGQVTTLTVSS----------------------------------------------------------------------------------------------- -
SCOP domains d1uz6w1 W:1-113 Immunoglobulin heavy chain variable domain, VH d1uz6w2 W:114-212 Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma - SCOP domains
CATH domains 1uz6W01 W:1-112 Immunoglobulins -1uz6W02 W:114-213 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeee.......ee...eeeee........eeeee.....eeeeeeeeeee.....eeee.hhh....eee...eee..eeeeeeeeeee.........eeeeeehhhheeeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1uz6 W 1 EVKLLESGGGLVQPGGSQKLSCAASGFDFSGYWMSWVRQAPGKGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARETGTRFDYWGQGTTLTVSSATTTAPSVYPLVPSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTELIKRIEPR 213
10 20 30 40 50 | 59 69 79 ||| 86 96 106 116 126| 141 151 161 171 181 191 201 211
52A 82A|| 126|
82B| 132
82C
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |