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(-) Description

Title :  CRYSTAL STRUCTURE OF PYROCOCCUS HORIKOSHII CUTA1 COMPLEXED WITH CU2+
 
Authors :  Y. Tanaka, Y. Yasutake, M. Yao, N. Sakai, I. Tanaka, K. Tsumoto, I. Kumag
Date :  01 Sep 03  (Deposition) - 13 Jan 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Cuta, Copper Tolerance, Structural Genomics, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tanaka, K. Tsumoto, T. Nakanishi, Y. Yasutake, N. Sakai, M. Yao, I. Tanaka, I. Kumagai
Structural Implications For Heavy Metal-Induced Reversible Assembly And Aggregation Of A Protein: The Case Of Pyrococcus Horikoshii Cuta.
Febs Lett. V. 556 167 2004
PubMed-ID: 14706845  |  Reference-DOI: 10.1016/S0014-5793(03)01402-9

(-) Compounds

Molecule 1 - PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET20B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PH0992
    Organism Scientific: PYROCOCCUS HORIKOSHII
    Organism Taxid: 70601
    Strain: OT3
    Synonym: CUTA1

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CU1Ligand/IonCOPPER (II) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:48 , LYS A:49 , HOH A:249BINDING SITE FOR RESIDUE CU A 150

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1UKU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1UKU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1UKU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1UKU)

(-) Exons   (0, 0)

(no "Exon" information available for 1UKU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:102
 aligned with CUTA_PYRHO | O58720 from UniProtKB/Swiss-Prot  Length:102

    Alignment length:102
                                    10        20        30        40        50        60        70        80        90       100  
           CUTA_PYRHO     1 MIIVYTTFPDWESAEKVVKTLLKERLIACANLREHRAFYWWEGKIEEDKEVGAILKTREDLWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETKK 102
               SCOP domains d1ukua_ A: Cut A1                                                                                      SCOP domains
               CATH domains 1ukuA00 A:1-102  [code=3.30.70.830, no name defined]                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhh....eeeeeeeeeeeee..eeeeeeeeeeeeeehhhhhhhhhhhhhhhh.......eeee....hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 1uku A   1 MIIVYTTFPDWESAEKVVKTLLKERLIACANLREHRAFYWWEGKIEEDKEVGAILKTREDLWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETKK 102
                                    10        20        30        40        50        60        70        80        90       100
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1UKU)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (CUTA_PYRHO | O58720)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0010038    response to metal ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1uku
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  CUTA_PYRHO | O58720
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CUTA_PYRHO | O58720: 1j2v 1umj 2e66 4nyo 4nyp

(-) Related Entries Specified in the PDB File

1j2v THE SAME PROTEIN COMPLEXED WITH SELENOMETHIONINE