Chain A from PDB Type:PROTEIN Length:171
aligned with Q9KQ45_VIBCH | Q9KQ45 from UniProtKB/TrEMBL Length:180
Alignment length:179
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
Q9KQ45_VIBCH - -MTQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDVQGSLNFIKN 178
SCOP domains d1u8sa1 A:2-87 putative transcriptional repressor VC2159 d1u8sa2 A:88-180 putative transcriptional r epressor VC2159 SCOP domains
CATH domains 1u8sA01 A:2-87 [code=3.30.70.260, no name defined] -1u8sA02 A:89-180 [code=3.30.70.260, no na me defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeee...hhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeeehhhhhhhhhhhhhhhhhhhh.eeeeeee.........eeeeeeeee....hhhhhhhhhhhhh...eeeeeeeee.--------.eeeeeeeeee....hhhhhhhhhhhhhhhhh.eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1u8s A 2 SLTQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTIS--------NQFHIAISARVDSGCNLMQLQEEFDALCTALDVQGSLNFIKN 180
11 21 31 41 51 61 71 81 91 101 111 121 |- 141 151 161 171
130 139
Chain B from PDB Type:PROTEIN Length:172
aligned with Q9KQ45_VIBCH | Q9KQ45 from UniProtKB/TrEMBL Length:180
Alignment length:179
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169
Q9KQ45_VIBCH - -MTQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDVQGSLNFIKN 178
SCOP domains d1u8sb1 B:2-87 putative transcriptional repressor VC2159 d1u8sb2 B:88-180 putative transcriptional re pressor VC2159 SCOP domains
CATH domains 1u8sB01 B:2-87 [code=3.30.70.260, no name defined] -1u8sB02 B:89-180 [code=3.30.70.260, no nam e defined] CATH domains
Pfam domains (1) ---ACT_6-1u8sB01 B:5-80 ---------------------------------------------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) ---ACT_6-1u8sB02 B:5-80 ---------------------------------------------------------------------------------------------------- Pfam domains (2)
Sec.struct. author ...eeeeeeeeee...hhhhhhhhhhhh...eeeeeeeeee..eeeeeeeeeehhhhhhhhhhhhhhhhhh...eeeeeee.........eeeeeeeee.....hhhhhhhhhhhh..eeeeeeeee...-------..eeeeeeeee....hhhhhhhhhhhhhhhh..eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1u8s B 2 SLTQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISK-------NQFHIAISARVDSGCNLMQLQEEFDALCTALDVQGSLNFIKN 180
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171
131 139
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |