Chain A from PDB Type:PROTEIN Length:105
aligned with CADC_STAAU | P20047 from UniProtKB/Swiss-Prot Length:122
Alignment length:109
20 30 40 50 60 70 80 90 100 110
CADC_STAAU 11 CYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAHKKEVK 119
SCOP domains -d1u2wa1 A:12-119 Cadmium efflux system accessory protein CadC SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhh.hhhhhhhhhhhhhhh..eeee----..eeee.hhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------HTH_ARSR_2 PDB: A:24-119 UniProt: 24-119 PROSITE (1)
PROSITE (2) -----------------------------------------------HTH_ARSR_1 ------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------- Transcript
1u2w A 11 GYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFR----LALYSLGDEHIRQIMMIALAHKKEVK 119
20 30 40 50 60 70 80 |- | 100 110
89 94
Chain B from PDB Type:PROTEIN Length:107
aligned with CADC_STAAU | P20047 from UniProtKB/Swiss-Prot Length:122
Alignment length:107
20 30 40 50 60 70 80 90 100 110
CADC_STAAU 11 CYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAHKKE 117
SCOP domains d1u2wb_ B: Cadmium efflux system accessory protein CadC SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhh.hhhhhhhhhhhhhhh..eeeee....eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------------HTH_ARSR_2 PDB: B:24-117 UniProt: 24-119 PROSITE (1)
PROSITE (2) -----------------------------------------------HTH_ARSR_1 ----------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
1u2w B 11 GYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAHKKE 117
20 30 40 50 60 70 80 90 100 110
Chain C from PDB Type:PROTEIN Length:98
aligned with CADC_STAAU | P20047 from UniProtKB/Swiss-Prot Length:122
Alignment length:98
26 36 46 56 66 76 86 96 106
CADC_STAAU 17 VNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAH 114
SCOP domains d1u2wc_ C: Cadmium efflux system accessory protein CadC SCOP domains
CATH domains -------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhh.hhhhhhhhhhhhhhh..eeeeee..eeeeee.hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -------HTH_ARSR_2 PDB: C:24-114 UniProt: 24-119 PROSITE (1)
PROSITE (2) -----------------------------------------HTH_ARSR_1 -------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------- Transcript
1u2w C 17 VNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAH 114
26 36 46 56 66 76 86 96 106
Chain D from PDB Type:PROTEIN Length:94
aligned with CADC_STAAU | P20047 from UniProtKB/Swiss-Prot Length:122
Alignment length:108
20 30 40 50 60 70 80 90 100 110
CADC_STAAU 11 CYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIMMIALAHKKEV 118
SCOP domains d1u2wd_ D: Cadmium efflux system accessory protein CadC SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) ------------------------------HTH_5-1u2wD01 D:41-81 ------------------------------------- Pfam domains (1)
Pfam domains (2) ------------------------------HTH_5-1u2wD02 D:41-81 ------------------------------------- Pfam domains (2)
Pfam domains (3) ------------------------------HTH_5-1u2wD03 D:41-81 ------------------------------------- Pfam domains (3)
Pfam domains (4) ------------------------------HTH_5-1u2wD04 D:41-81 ------------------------------------- Pfam domains (4)
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhh--------------.....hhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (1) -------------HTH_ARSR_2 PDB: D:24-118 UniProt: 24-119 PROSITE (1)
PROSITE (2) -----------------------------------------------HTH_ARSR_1 ------------------------------------------ PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1u2w D 11 GYDEEKVNRIQGDLQTVDISGVSQILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLY--------------LYSLGDEHIRQIMMIALAHKKEV 118
20 30 40 50 60 70 80| - | 100 110
81 96
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |