Chain A from PDB Type:PROTEIN Length:201
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:238
401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581 591 601 611 621
VE1_HPV18 392 SNSNAAAFLKSNCQAKYLKDCATMCKHYRRAQKRQMNMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
SCOP domains d1t uea_ A: Replication protein E1 helicase domain SCOP domains
CATH domains 1tu eA00 A:425-629 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...---------------------------------hhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhhh.ee........hhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhh..eee.----..eee....eeeee.........hhhhhh..eeee.................hhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------SF3_HELICASE_1 PDB: A:458-608 UniProt: 458-608 --------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue A 425 SGS---------------------------------NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISID----PLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
| - - - |431 441 451 461 471 481 491 501 511 521 531 541 551 | 561 571 581 591 601 611 621
427 428 555 560
Chain B from PDB Type:PROTEIN Length:194
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:194
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
Q80B71_HPV18 - -MQTPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHF 193
SCOP domains d1tueb_ B: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueB01 B:0-105 [code=1.10.287.30, no name defined] 1tueB02 B:106-193 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhhhhh....eeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue B 0 HMQTPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHF 193
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
Chain B from PDB Type:PROTEIN Length:194
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:194
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
VE2_HPV18 - -MQTPKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHF 193
SCOP domains d1tueb_ B: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueB01 B:0-105 [code=1.10.287.30, no name defined] 1tueB02 B:106-193 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhhhhh....eeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue B 0 HMQTPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHF 193
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189
Chain D from PDB Type:PROTEIN Length:202
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:202
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
VE1_HPV18 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
SCOP domains d1tued_ D: Replication protein E1 helicase domain SCOP domains
CATH domains 1tueD00 D:428-629 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhhhh.ee.......hhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhh...eee.......eee....eeeee.........hhhhhh..eeee.................hhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------SF3_HELICASE_1 PDB: D:458-608 UniProt: 458-608 --------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue D 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
Chain E from PDB Type:PROTEIN Length:196
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:196
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
Q80B71_HPV18 3 TPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVI 198
SCOP domains d1tuee_ E: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueE01 E:3-105 [code=1.10.287.30, no name defined] 1tueE02 E:106-198 [code=2.170.200.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhh.......eeeee..ee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue E 3 TPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVI 198
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
Chain E from PDB Type:PROTEIN Length:196
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:196
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
VE2_HPV18 3 TPKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVI 198
SCOP domains d1tuee_ E: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueE01 E:3-105 [code=1.10.287.30, no name defined] 1tueE02 E:106-198 [code=2.170.200.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhh.......eeeee..ee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue E 3 TPKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVI 198
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
Chain F from PDB Type:PROTEIN Length:188
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:201
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
VE1_HPV18 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLD 628
SCOP domains d1tuef_ F: Replication protein E1 helicase domain SCOP domains
CATH domains 1tueF00 F:428-628 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhhhh.eee..........hhhhh....eee...hhhhhhhhhhhhhhhhh...-------------....eeeee.................eeee.................hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------SF3_HELICASE_1 PDB: F:458-608 UniProt: 458-608 -------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue F 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNP-------------KCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLD 628
437 447 457 467 477 487 497 507 517 527 537 547 | - 567 577 587 597 607 617 627
551 565
Chain G from PDB Type:PROTEIN Length:196
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:196
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Q80B71_HPV18 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVID 199
SCOP domains d1tueg_ G: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueG01 G:4-105 [code=1.10.287.30, no name defined] 1tueG02 G:106-199 [code=2.170.200.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......eee...eeeeee......eeeee...eeeee.....eeee.eeee..eeeeee..eeeeeeehhhhhh.......eeeee...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue G 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVID 199
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain G from PDB Type:PROTEIN Length:196
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:196
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
VE2_HPV18 4 PKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVID 199
SCOP domains d1tueg_ G: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueG01 G:4-105 [code=1.10.287.30, no name defined] 1tueG02 G:106-199 [code=2.170.200.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh......eee...eeeeee......eeeee...eeeee.....eeee.eeee..eeeeee..eeeeeeehhhhhh.......eeeee...... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue G 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNVID 199
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain H from PDB Type:PROTEIN Length:191
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:201
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
VE1_HPV18 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLD 628
SCOP domains d1tueh_ H: Replication protein E1 helicase domain SCOP domains
CATH domains 1tueH00 H:428-628 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhh.....hhhhhhhhhhh..hhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhhh.ee........hhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhh.....----------....eeeee.........hhhhhh..eeee.................hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------SF3_HELICASE_1 PDB: H:458-608 UniProt: 458-608 -------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue H 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISI----------KCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLD 628
437 447 457 467 477 487 497 507 517 527 537 547 | - 567 577 587 597 607 617 627
554 565
Chain J from PDB Type:PROTEIN Length:194
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Q80B71_HPV18 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tuej_ J: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueJ01 J:4-105 [code=1.10.287.30, no name defined] 1tueJ02 J:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhhhhh....eeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue J 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain J from PDB Type:PROTEIN Length:194
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
VE2_HPV18 4 PKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tuej_ J: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueJ01 J:4-105 [code=1.10.287.30, no name defined] 1tueJ02 J:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhhhhh....eeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue J 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain K from PDB Type:PROTEIN Length:192
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:202
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
VE1_HPV18 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
SCOP domains d1tuek_ K: Replication protein E1 helicase domain SCOP domains
CATH domains 1tueK00 K:428-629 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhhh.eee.......hhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhh....----------......eeeee.........hhhhhh..eeee.................hhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------SF3_HELICASE_1 PDB: K:458-608 UniProt: 458-608 --------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue K 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPI----------QLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
437 447 457 467 477 487 497 507 517 527 537 547 | - | 567 577 587 597 607 617 627
552 563
Chain L from PDB Type:PROTEIN Length:193
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Q80B71_HPV18 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tuel_ L: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueL01 L:4-105 [code=1.10.287.30, no name defined] 1tueL02 L:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhh.....eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhh...-...eeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue L 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYG-TGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183| | 193
184 |
186
Chain L from PDB Type:PROTEIN Length:193
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
VE2_HPV18 4 PKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tuel_ L: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueL01 L:4-105 [code=1.10.287.30, no name defined] 1tueL02 L:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhh.....eeeeeeeeeeee......eeeeeeeeeeeee.....eeee.eee...eeeeee..eeeeeeehhhhhh...-...eeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue L 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYG-TGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183| | 193
184 |
186
Chain M from PDB Type:PROTEIN Length:196
aligned with VE1_HPV18 | P06789 from UniProtKB/Swiss-Prot Length:657
Alignment length:202
437 447 457 467 477 487 497 507 517 527 537 547 557 567 577 587 597 607 617 627
VE1_HPV18 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
SCOP domains d1tuem_ M: Replication protein E1 helicase domain SCOP domains
CATH domains 1tueM00 M:428-629 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains (1) PPV_E1_C-1tueM01 M:428-629 Pfam domains (1)
Pfam domains (2) PPV_E1_C-1tueM02 M:428-629 Pfam domains (2)
Pfam domains (3) PPV_E1_C-1tueM03 M:428-629 Pfam domains (3)
Pfam domains (4) PPV_E1_C-1tueM04 M:428-629 Pfam domains (4)
Pfam domains (5) PPV_E1_C-1tueM05 M:428-629 Pfam domains (5)
Pfam domains (6) PPV_E1_C-1tueM06 M:428-629 Pfam domains (6)
Sec.struct. author hhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhhhhh.ee........hhhhhhhh....eeeeeehhhhhhhhhhhhhhhhh..ee...-----...ee...eeeee.......-.hhhhhh..eeee.................hhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------SF3_HELICASE_1 PDB: M:458-608 UniProt: 458-608 --------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue M 428 NMSQWIRFRCSKIDEGGDWRPIVQFLRYQQIEFITFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISID-----LIQLKCPPILLTTNIHPAKD-RWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFERTWSRLDL 629
437 447 457 467 477 487 497 507 517 527 537 547 | - | 567 577 | | 587 597 607 617 627
555 561 580 |
582
Chain Q from PDB Type:PROTEIN Length:194
aligned with Q80B71_HPV18 | Q80B71 from UniProtKB/TrEMBL Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Q80B71_HPV18 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tueq_ Q: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueQ01 Q:4-105 [code=1.10.287.30, no name defined] 1tueQ02 Q:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains (1) -PPV_E2_N-1tueQ01 Q:5-197 Pfam domains (1)
Pfam domains (2) -PPV_E2_N-1tueQ02 Q:5-197 Pfam domains (2)
Pfam domains (3) -PPV_E2_N-1tueQ03 Q:5-197 Pfam domains (3)
Pfam domains (4) -PPV_E2_N-1tueQ04 Q:5-197 Pfam domains (4)
Pfam domains (5) -PPV_E2_N-1tueQ05 Q:5-197 Pfam domains (5)
Pfam domains (6) -PPV_E2_N-1tueQ06 Q:5-197 Pfam domains (6)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eee...eeeeee......eeeee...eeeee.....eeee.eee...eeeee....eeeeeehhhhhhhhh....eeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue Q 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain Q from PDB Type:PROTEIN Length:194
aligned with VE2_HPV18 | P06790 from UniProtKB/Swiss-Prot Length:365
Alignment length:194
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
VE2_HPV18 4 PKETLSERLSCVQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
SCOP domains d1tueq_ Q: E2 regulatory, transactivation domain SCOP domains
CATH domains 1tueQ01 Q:4-105 [code=1.10.287.30, no name defined] 1tueQ02 Q:106-197 [code=2.170.200.10, no name defined] CATH domains
Pfam domains (1) -PPV_E2_N-1tueQ01 Q:5-197 Pfam domains (1)
Pfam domains (2) -PPV_E2_N-1tueQ02 Q:5-197 Pfam domains (2)
Pfam domains (3) -PPV_E2_N-1tueQ03 Q:5-197 Pfam domains (3)
Pfam domains (4) -PPV_E2_N-1tueQ04 Q:5-197 Pfam domains (4)
Pfam domains (5) -PPV_E2_N-1tueQ05 Q:5-197 Pfam domains (5)
Pfam domains (6) -PPV_E2_N-1tueQ06 Q:5-197 Pfam domains (6)
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh...ee..ee..hhhhhhhhhhhhhhhhhhhhhhh..............hhhhhh......eee...eeeeee......eeeee...eeeee.....eeee.eee...eeeee....eeeeeehhhhhhhhh....eeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tue Q 4 PKETLSERLSALQDKIIDHYENDSKDIDSQIQYWQLIRWENAIFFAAREHGIQTLNHQVVPAYNISKSKAHKAIELQMALQGLAQSAYKTEDWTLQDTCEELWNTEPTHCFKKGGQTVQVYFDGNKDNCMTYVAWDSVYYMTDAGTWDKTATCVSHRGLYYVKEGYNTFYIEFKSECEKYGNTGTWEVHFGNNV 197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |