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1TUE
Asym. Unit
Info
Asym.Unit (409 KB)
Biol.Unit 1 (74 KB)
Biol.Unit 2 (75 KB)
Biol.Unit 3 (71 KB)
Biol.Unit 4 (71 KB)
Biol.Unit 5 (71 KB)
Biol.Unit 6 (70 KB)
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(1)
Title
:
THE X-RAY STRUCTURE OF THE PAPILLOMAVIRUS HELICASE IN COMPLEX WITH ITS MOLECULAR MATCHMAKER E2
Authors
:
E. A. Abbate, J. M. Berger, M. R. Botchan
Date
:
24 Jun 04 (Deposition) - 24 Aug 04 (Release) - 14 Jul 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,D,E,F,G,H,J,K,L,M,Q
Biol. Unit 1: A,B (1x)
Biol. Unit 2: D,E (1x)
Biol. Unit 3: F,G (1x)
Biol. Unit 4: H,J (1x)
Biol. Unit 5: K,L (1x)
Biol. Unit 6: M,Q (1x)
Keywords
:
Human Papillomavirus, Helicase, Replication, E1E2 Complex, Aaa+ Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. A. Abbate, J. M. Berger, M. R. Botchan
The X-Ray Structure Of The Papillomavirus Helicase In Complex With Its Molecular Matchmaker E2
Genes Dev. V. 18 1981 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: SF3_HELICASE_1 (A:458-608,D:458-608,F:458-608,H:45...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SF3_HELICASE_1
PS51206
Superfamily 3 helicase of DNA viruses domain profile.
VE1_HPV18
458-608
6
A:458-608
D:458-608
F:458-608
H:458-608
K:458-608
M:458-608
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1tueb_ (B:)
1b: SCOP_d1tuee_ (E:)
1c: SCOP_d1tueg_ (G:)
1d: SCOP_d1tuej_ (J:)
1e: SCOP_d1tuel_ (L:)
1f: SCOP_d1tueq_ (Q:)
2a: SCOP_d1tuea_ (A:)
2b: SCOP_d1tued_ (D:)
2c: SCOP_d1tuef_ (F:)
2d: SCOP_d1tueh_ (H:)
2e: SCOP_d1tuek_ (K:)
2f: SCOP_d1tuem_ (M:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
E2 regulatory, transactivation domain
(8)
Superfamily
:
E2 regulatory, transactivation domain
(8)
Family
:
E2 regulatory, transactivation domain
(6)
Protein domain
:
E2 regulatory, transactivation domain
(6)
Human papillomavirus type 18 [TaxId: 333761]
(2)
1a
d1tueb_
B:
1b
d1tuee_
E:
1c
d1tueg_
G:
1d
d1tuej_
J:
1e
d1tuel_
L:
1f
d1tueq_
Q:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Extended AAA-ATPase domain
(92)
Protein domain
:
Replication protein E1 helicase domain
(1)
Human papillomavirus type 18 [TaxId: 333761]
(1)
2a
d1tuea_
A:
2b
d1tued_
D:
2c
d1tuef_
F:
2d
d1tueh_
H:
2e
d1tuek_
K:
2f
d1tuem_
M:
[
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CATH Domains
(3, 18)
Info
all CATH domains
1a: CATH_1tueD00 (D:428-629)
1b: CATH_1tueA00 (A:425-629)
1c: CATH_1tueM00 (M:428-629)
1d: CATH_1tueK00 (K:428-629)
1e: CATH_1tueH00 (H:428-628)
1f: CATH_1tueF00 (F:428-628)
2a: CATH_1tueG01 (G:4-105)
2b: CATH_1tueJ01 (J:4-105)
2c: CATH_1tueL01 (L:4-105)
2d: CATH_1tueQ01 (Q:4-105)
2e: CATH_1tueE01 (E:3-105)
2f: CATH_1tueB01 (B:0-105)
3a: CATH_1tueG02 (G:106-199)
3b: CATH_1tueE02 (E:106-198)
3c: CATH_1tueJ02 (J:106-197)
3d: CATH_1tueQ02 (Q:106-197)
3e: CATH_1tueL02 (L:106-197)
3f: CATH_1tueB02 (B:106-193)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human papillomavirus type 18. Organism_taxid: 333761.
(1)
1a
1tueD00
D:428-629
1b
1tueA00
A:425-629
1c
1tueM00
M:428-629
1d
1tueK00
K:428-629
1e
1tueH00
H:428-628
1f
1tueF00
F:428-628
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.30, no name defined]
(7)
Human papillomavirus type 18. Organism_taxid: 333761.
(1)
2a
1tueG01
G:4-105
2b
1tueJ01
J:4-105
2c
1tueL01
L:4-105
2d
1tueQ01
Q:4-105
2e
1tueE01
E:3-105
2f
1tueB01
B:0-105
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Complex
(381)
Topology
:
Regulatory Protein E2; Chain: A; Domain 2
(6)
Homologous Superfamily
:
[code=2.170.200.10, no name defined]
(6)
Human papillomavirus type 18. Organism_taxid: 333761.
(1)
3a
1tueG02
G:106-199
3b
1tueE02
E:106-198
3c
1tueJ02
J:106-197
3d
1tueQ02
Q:106-197
3e
1tueL02
L:106-197
3f
1tueB02
B:106-193
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Pfam Domains
(2, 12)
Info
all PFAM domains
1a: PFAM_PPV_E1_C_1tueM01 (M:428-629)
1b: PFAM_PPV_E1_C_1tueM02 (M:428-629)
1c: PFAM_PPV_E1_C_1tueM03 (M:428-629)
1d: PFAM_PPV_E1_C_1tueM04 (M:428-629)
1e: PFAM_PPV_E1_C_1tueM05 (M:428-629)
1f: PFAM_PPV_E1_C_1tueM06 (M:428-629)
2a: PFAM_PPV_E2_N_1tueQ01 (Q:5-197)
2b: PFAM_PPV_E2_N_1tueQ02 (Q:5-197)
2c: PFAM_PPV_E2_N_1tueQ03 (Q:5-197)
2d: PFAM_PPV_E2_N_1tueQ04 (Q:5-197)
2e: PFAM_PPV_E2_N_1tueQ05 (Q:5-197)
2f: PFAM_PPV_E2_N_1tueQ06 (Q:5-197)
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Clans
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)
Clan
:
P-loop_NTPase
(1112)
Family
:
PPV_E1_C
(5)
Human papillomavirus type 18
(2)
1a
PPV_E1_C-1tueM01
M:428-629
1b
PPV_E1_C-1tueM02
M:428-629
1c
PPV_E1_C-1tueM03
M:428-629
1d
PPV_E1_C-1tueM04
M:428-629
1e
PPV_E1_C-1tueM05
M:428-629
1f
PPV_E1_C-1tueM06
M:428-629
Clan
:
no clan defined [family: PPV_E2_N]
(6)
Family
:
PPV_E2_N
(6)
Human papillomavirus type 18
(2)
2a
PPV_E2_N-1tueQ01
Q:5-197
2b
PPV_E2_N-1tueQ02
Q:5-197
2c
PPV_E2_N-1tueQ03
Q:5-197
2d
PPV_E2_N-1tueQ04
Q:5-197
2e
PPV_E2_N-1tueQ05
Q:5-197
2f
PPV_E2_N-1tueQ06
Q:5-197
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