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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF RECOMBINANT RAT KIDNEY LONG-CHAIN HYDROXY ACID OXIDASE
 
Authors :  L. M. Cunane, J. D. Barton, Z. W. Chen, K. H. D. Le, D. Amar, F. Lederer, F. S. Mathews
Date :  19 May 04  (Deposition) - 01 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Biol. Unit 3:  A,B,C,D,E,F,G,H  (1x)
Keywords :  Long Chain Alpha-Hydroxy Acid Oxidase, Flavoprotein, Oxidase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. M. Cunane, J. D. Barton, Z. W. Chen, K. H. D. Le, D. Amar, F. Lederer, F. S. Mathews
Crystal Structure Analysis Of Recombinant Rat Kidney Long Chain Hydroxy Acid Oxidase.
Biochemistry V. 44 1521 2005
PubMed-ID: 15683236  |  Reference-DOI: 10.1021/BI048616E
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYDROXYACID OXIDASE 3
    Chains: A, B, C, D, E, F, G, H
    EC Number: 1.1.3.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: HAO3, HAOX3
    Organism Common: NORWAY RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: HAOX3, (S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL, LONG CHAIN ALPHA-HYDROXY ACID OXIDASE, LONG-CHAIN L-2- HYDROXY ACID OXIDASE

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH
Biological Unit 3 (1x): ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1ACY8Ligand/IonACETIC ACID
2FMN8Ligand/IonFLAVIN MONONUCLEOTIDE
Biological Unit 1 (2, 8)
No.NameCountTypeFull Name
1ACY4Ligand/IonACETIC ACID
2FMN4Ligand/IonFLAVIN MONONUCLEOTIDE
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1ACY4Ligand/IonACETIC ACID
2FMN4Ligand/IonFLAVIN MONONUCLEOTIDE
Biological Unit 3 (2, 16)
No.NameCountTypeFull Name
1ACY8Ligand/IonACETIC ACID
2FMN8Ligand/IonFLAVIN MONONUCLEOTIDE

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE A:23 , ILE A:24 , PRO A:76 , THR A:77 , ALA A:78 , SER A:105 , GLN A:127 , TYR A:129 , THR A:155 , LYS A:223 , SER A:245 , HIS A:247 , ARG A:250 , ASP A:278 , GLY A:279 , GLY A:280 , ARG A:282 , GLY A:301 , ARG A:302 , LEU A:305 , ACY A:1402 , HOH A:1410 , HOH A:1415BINDING SITE FOR RESIDUE FMN A 1401
02AC2SOFTWAREPHE B:23 , ILE B:24 , PRO B:76 , THR B:77 , ALA B:78 , SER B:105 , GLN B:127 , TYR B:129 , THR B:155 , LYS B:223 , SER B:245 , HIS B:247 , ARG B:250 , ASP B:278 , GLY B:279 , GLY B:280 , ARG B:282 , GLY B:301 , ARG B:302 , LEU B:305 , ACY B:2402 , HOH B:2411 , HOH B:2423BINDING SITE FOR RESIDUE FMN B 2401
03AC3SOFTWAREPHE C:23 , ILE C:24 , PRO C:76 , THR C:77 , ALA C:78 , SER C:105 , GLN C:127 , TYR C:129 , THR C:155 , LYS C:223 , SER C:245 , HIS C:247 , ARG C:250 , ASP C:278 , GLY C:279 , GLY C:280 , ARG C:282 , GLY C:301 , ARG C:302 , LEU C:305 , ACY C:3402 , HOH C:3405 , HOH C:3445BINDING SITE FOR RESIDUE FMN C 3401
04AC4SOFTWAREPHE D:23 , ILE D:24 , PRO D:76 , THR D:77 , ALA D:78 , SER D:105 , GLN D:127 , TYR D:129 , THR D:155 , LYS D:223 , SER D:245 , HIS D:247 , ARG D:250 , ASP D:278 , GLY D:279 , GLY D:280 , ARG D:282 , GLY D:301 , ARG D:302 , LEU D:305 , ACY D:4402 , HOH D:4421 , HOH D:4422BINDING SITE FOR RESIDUE FMN D 4401
05AC5SOFTWAREPHE E:23 , ILE E:24 , SER E:75 , PRO E:76 , THR E:77 , ALA E:78 , SER E:105 , GLN E:127 , TYR E:129 , THR E:155 , LYS E:223 , SER E:245 , HIS E:247 , GLY E:248 , ARG E:250 , ASP E:278 , GLY E:279 , GLY E:280 , ARG E:282 , GLY E:301 , ARG E:302 , LEU E:305 , ACY E:5402 , HOH E:5425 , HOH E:5426BINDING SITE FOR RESIDUE FMN E 5401
06AC6SOFTWAREPHE F:23 , ILE F:24 , PRO F:76 , THR F:77 , ALA F:78 , SER F:105 , GLN F:127 , TYR F:129 , THR F:155 , LYS F:223 , SER F:245 , HIS F:247 , ARG F:250 , ASP F:278 , GLY F:279 , GLY F:280 , ARG F:282 , GLY F:301 , ARG F:302 , LEU F:305 , ACY F:6402 , HOH F:6408 , HOH F:6421BINDING SITE FOR RESIDUE FMN F 6401
07AC7SOFTWAREPHE G:23 , ILE G:24 , PRO G:76 , THR G:77 , ALA G:78 , SER G:105 , GLN G:127 , TYR G:129 , THR G:155 , LYS G:223 , SER G:245 , HIS G:247 , ARG G:250 , ASP G:278 , GLY G:279 , GLY G:280 , ARG G:282 , GLY G:301 , ARG G:302 , LEU G:305 , ACY G:7402 , HOH G:7409 , HOH G:7427BINDING SITE FOR RESIDUE FMN G 7401
08AC8SOFTWAREPHE H:23 , ILE H:24 , PRO H:76 , THR H:77 , ALA H:78 , SER H:105 , GLN H:127 , TYR H:129 , THR H:155 , LYS H:223 , SER H:245 , HIS H:247 , ARG H:250 , ASP H:278 , GLY H:279 , GLY H:280 , ARG H:282 , GLY H:301 , ARG H:302 , LEU H:305 , ACY H:8402 , HOH H:8403 , HOH H:8441BINDING SITE FOR RESIDUE FMN H 8401
09AC9SOFTWARETYR A:129 , ARG A:164 , HIS A:247 , ARG A:250 , FMN A:1401BINDING SITE FOR RESIDUE ACY A 1402
10BC1SOFTWARETYR B:129 , ARG B:164 , HIS B:247 , ARG B:250 , FMN B:2401BINDING SITE FOR RESIDUE ACY B 2402
11BC2SOFTWARETYR C:129 , ARG C:164 , HIS C:247 , FMN C:3401BINDING SITE FOR RESIDUE ACY C 3402
12BC3SOFTWARETYR D:129 , ARG D:164 , HIS D:247 , FMN D:4401BINDING SITE FOR RESIDUE ACY D 4402
13BC4SOFTWARETYR E:129 , ARG E:164 , HIS E:247 , ARG E:250 , FMN E:5401BINDING SITE FOR RESIDUE ACY E 5402
14BC5SOFTWARETYR F:129 , ARG F:164 , HIS F:247 , ARG F:250 , FMN F:6401BINDING SITE FOR RESIDUE ACY F 6402
15BC6SOFTWARETYR G:129 , ARG G:164 , HIS G:247 , FMN G:7401BINDING SITE FOR RESIDUE ACY G 7402
16BC7SOFTWARETYR H:129 , ARG H:164 , HIS H:247 , FMN H:8401BINDING SITE FOR RESIDUE ACY H 8402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1TB3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1TB3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1TB3)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FMN_HYDROXY_ACID_DH_1PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.HAOX2_RAT246-252
 
 
 
 
 
 
 		  8A:245-251
B:245-251
C:245-251
D:245-251
E:245-251
F:245-251
G:245-251
H:245-251
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FMN_HYDROXY_ACID_DH_1PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.HAOX2_RAT246-252
 
 
 
 
 
 
 		  4A:245-251
B:245-251
C:245-251
D:245-251
-
-
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FMN_HYDROXY_ACID_DH_1PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.HAOX2_RAT246-252
 
 
 
 
 
 
 		  4-
-
-
-
E:245-251
F:245-251
G:245-251
H:245-251
Biological Unit 3 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FMN_HYDROXY_ACID_DH_1PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site.HAOX2_RAT246-252
 
 
 
 
 
 
 		  8A:245-251
B:245-251
C:245-251
D:245-251
E:245-251
F:245-251
G:245-251
H:245-251

(-) Exons   (7, 56)

Asymmetric Unit (7, 56)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENSRNOT000000469421ENSRNOE00000330508chr2:193557229-19355714288HAOX2_RAT-00--
1.2ENSRNOT000000469422ENSRNOE00000336299chr2:193549512-193549408105HAOX2_RAT-00--
1.3ENSRNOT000000469423ENSRNOE00000188996chr2:193548657-193548519139HAOX2_RAT1-44448A:1-43
B:1-43
C:1-43
D:1-43
E:1-43
F:1-43
G:1-43
H:1-43		43
43
43
43
43
43
43
43
1.4ENSRNOT000000469424ENSRNOE00000189030chr2:193547532-193547381152HAOX2_RAT44-95528A:43-94
B:43-94
C:43-94
D:43-94
E:43-94
F:43-94
G:43-94
H:43-94		52
52
52
52
52
52
52
52
1.5ENSRNOT000000469425ENSRNOE00000189057chr2:193546078-193545795284HAOX2_RAT95-189958A:94-188 (gaps)
B:94-187 (gaps)
C:94-188 (gaps)
D:94-187 (gaps)
E:94-176
F:94-188 (gaps)
G:94-188 (gaps)
H:94-188 (gaps)		95
94
95
94
83
95
95
95
1.6ENSRNOT000000469426ENSRNOE00000189087chr2:193544624-193544415210HAOX2_RAT190-259708A:202-258
B:202-258
C:202-258
D:202-258
E:202-258
F:202-258
G:202-258
H:202-258		57
57
57
57
57
57
57
57
1.7ENSRNOT000000469427ENSRNOE00000189115chr2:193534744-193534586159HAOX2_RAT260-312538A:259-311
B:259-311
C:259-311
D:259-311
E:259-311
F:259-311
G:259-311
H:259-311		53
53
53
53
53
53
53
53
1.8ENSRNOT000000469428ENSRNOE00000189146chr2:193534270-19353420170HAOX2_RAT313-336248A:312-335
B:312-335
C:312-335
D:312-335
E:312-335
F:312-335
G:312-335
H:312-335		24
24
24
24
24
24
24
24
1.9ENSRNOT000000469429ENSRNOE00000340820chr2:193533272-193532833440HAOX2_RAT336-353188A:335-349
B:335-349
C:335-349
D:335-349
E:335-349
F:335-349
G:335-349
H:335-349		15
15
15
15
15
15
15
15

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:332
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3a1 A:1-349 Hydroxyacid oxidase                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1tb3A00 A:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.......hhhhhhhhhhhhhh...eeee........hhhhhhh......----........-------------...hhhhhhhhhh.....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: A:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: A:94-188 (gaps) UniProt: 95-189                                                 Exon 1.6  PDB: A:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: A:259-311 UniProt: 260-312            Exon 1.8  PDB: A:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: A:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 A   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA----KDLRALKE-------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -|      | -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176  181    188           202                                                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:327
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3b_ B: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3B00 B:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......--------...--------------...hhhhhhhhhhh....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: B:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: B:94-187 (gaps) UniProt: 95-189 [INCOMPLETE]                                    Exon 1.6  PDB: B:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: B:259-311 UniProt: 260-312            Exon 1.8  PDB: B:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: B:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 B   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA--------ALK--------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -    | |  -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176      185 |            202                                                                                                                                                   
                                                                                                                                                                                                                    187                                                                                                                                                                  


Chain C from PDB  Type:PROTEIN  Length:332
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3c_ C: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3C00 C:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhhh...eeee........hhhhhhh......----........-------------.....hhhhhhhh.....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: C:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: C:94-188 (gaps) UniProt: 95-189                                                 Exon 1.6  PDB: C:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: C:259-311 UniProt: 260-312            Exon 1.8  PDB: C:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: C:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 C   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA----KDLRALKE-------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -|      | -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176  181    188           202                                                                                                                                                   


Chain D from PDB  Type:PROTEIN  Length:329
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3d_ D: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3D00 D:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......------.....--------------...hhhhhhhhhhhh...eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: D:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: D:94-187 (gaps) UniProt: 95-189 [INCOMPLETE]                                    Exon 1.6  PDB: D:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: D:259-311 UniProt: 260-312            Exon 1.8  PDB: D:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: D:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 D   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA------LRALK--------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -  |   |  -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176    183 187            202                                                                                                                                                   


Chain E from PDB  Type:PROTEIN  Length:324
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3e_ E: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3E00 E:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......-------------------------.....hhhhhhhhh....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: E:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: E:94-176 UniProt: 95-189 [INCOMPLETE]                                           Exon 1.6  PDB: E:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: E:259-311 UniProt: 260-312            Exon 1.8  PDB: E:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: E:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 E   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA-------------------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -         -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176                       202                                                                                                                                                   


Chain F from PDB  Type:PROTEIN  Length:332
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3f_ F: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3F00 F:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......----........-------------...hhhhhhhhhh.....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: F:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: F:94-188 (gaps) UniProt: 95-189                                                 Exon 1.6  PDB: F:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: F:259-311 UniProt: 260-312            Exon 1.8  PDB: F:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: F:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 F   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA----KDLRALKE-------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -|      | -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176  181    188           202                                                                                                                                                   


Chain G from PDB  Type:PROTEIN  Length:329
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3g_ G: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3G00 G:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......-------.....-------------...hhhhhhhhhhh....eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: G:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: G:94-188 (gaps) UniProt: 95-189                                                 Exon 1.6  PDB: G:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: G:259-311 UniProt: 260-312            Exon 1.8  PDB: G:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: G:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 G   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA-------RALKE-------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -   |   | -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176     184 188           202                                                                                                                                                   


Chain H from PDB  Type:PROTEIN  Length:332
 aligned with HAOX2_RAT | Q07523 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:349
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341         
            HAOX2_RAT     2 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 350
               SCOP domains d1tb3h_ H: automated matches                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 1tb3H00 H:1-349 Aldolase class I                                                                                                                                                                                                                                                                                                                              CATH domains
           Pfam domains (1) -----------FMN_dh-1tb3H01 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (1)
           Pfam domains (2) -----------FMN_dh-1tb3H02 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (2)
           Pfam domains (3) -----------FMN_dh-1tb3H03 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (3)
           Pfam domains (4) -----------FMN_dh-1tb3H04 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (4)
           Pfam domains (5) -----------FMN_dh-1tb3H05 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (5)
           Pfam domains (6) -----------FMN_dh-1tb3H06 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (6)
           Pfam domains (7) -----------FMN_dh-1tb3H07 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (7)
           Pfam domains (8) -----------FMN_dh-1tb3H08 H:12-349                                                                                                                                                                                                                                                                                                                            Pfam domains (8)
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhh................eee..eee...eee....hhhhh...hhhhhhhhhhhhh..eee......hhhhhhhhh....eeee.....hhhhhhhhhhhhhhh....eeee........hhhhhhh......----........-------------.....hhhhhhhhhh...eeeeee.hhhhhhhhhhh...eeee.hhhhh......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMN_HYD-------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3  PDB: H:1-43 UniProt: 1-44        --------------------------------------------------Exon 1.5  PDB: H:94-188 (gaps) UniProt: 95-189                                                 Exon 1.6  PDB: H:202-258 UniProt: 190-259 [INCOMPLETE]                Exon 1.7  PDB: H:259-311 UniProt: 260-312            Exon 1.8  PDB: H:312-335-------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------Exon 1.4  PDB: H:43-94 UniProt: 44-95               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9        Transcript 1 (2)
                 1tb3 H   1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEA----KDLRALKE-------------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQF 349
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170     |   -|      | -         - |     210       220       230       240       250       260       270       280       290       300       310       320       330       340         
                                                                                                                                                                                                         176  181    188           202
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Alpha-Beta Barrel (2994)
(-)
Topology: TIM Barrel (2806)
(-)
Homologous Superfamily: Aldolase class I (887)
(-)
Norway rat (Rattus norvegicus) (1)
1a1tb3E00E:1-349
1b1tb3B00B:1-349
1c1tb3D00D:1-349
1d1tb3G00G:1-349
1e1tb3A00A:1-349
1f1tb3C00C:1-349
1g1tb3F00F:1-349
1h1tb3H00H:1-349

(-) Pfam Domains  (1, 8)

Asymmetric Unit
(-)
Clan: TIM_barrel (694)
(-)
Family: FMN_dh (23)
(-)
Rattus norvegicus (Rat) (1)
1aFMN_dh-1tb3H01H:12-349
1bFMN_dh-1tb3H02H:12-349
1cFMN_dh-1tb3H03H:12-349
1dFMN_dh-1tb3H04H:12-349
1eFMN_dh-1tb3H05H:12-349
1fFMN_dh-1tb3H06H:12-349
1gFMN_dh-1tb3H07H:12-349
1hFMN_dh-1tb3H08H:12-349

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (HAOX2_RAT | Q07523)
molecular function
    GO:0003973    (S)-2-hydroxy-acid oxidase activity    Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + hydrogen peroxide.
    GO:0010181    FMN binding    Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0052853    long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity    Catalysis of the reaction: long-chain-(S)-2-hydroxy-acid + O2 = long-chain-2-oxo acid + hydrogen peroxide. Long chain refers to a chain length of 14 to 18 carbons.
    GO:0052854    medium-chain-(S)-2-hydroxy-acid oxidase activity    Catalysis of the reaction: medium-chain-(S)-2-hydroxy-acid + O2 = medium-chain-2-oxo acid + hydrogen peroxide. Medium chain refers to a chain length of between 8 and 12 carbons.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0052852    very-long-chain-(S)-2-hydroxy-acid oxidase activity    Catalysis of the reaction: very-long-chain (S)-2-hydroxy-acid + O2 = very-long-chain 2-oxo acid + hydrogen peroxide. Very long chain refers to a chain length of greater than 18 carbons.
biological process
    GO:0018924    mandelate metabolic process    The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0051260    protein homooligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
cellular component
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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  1tb3
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  HAOX2_RAT | Q07523
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  1.1.3.15
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  HAOX2_RAT | Q07523
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        HAOX2_RAT | Q07523: 3sgz

(-) Related Entries Specified in the PDB File

1fcb MOLECULAR STRUCTURE OF FLAVOCYTOCHROME B2 AT 2.4 A RESOLUTION.
1gox REFINED STRUCTURE OF SPINACH GLYCOLATE OXIDASE AT 2 A RESOLUTION.