Chain A from PDB Type:PROTEIN Length:143
aligned with Q9S446_STAAU | Q9S446 from UniProtKB/TrEMBL Length:206
Alignment length:146
70 80 90 100 110 120 130 140 150 160 170 180 190 200
Q9S446_STAAU 61 AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEVK 206
SCOP domains d1t2oa_ A: Sortase A SCOP domains
CATH domains 1t2oA00 A:61-206 [code=2.40.260.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............eeeeehhhheeeeee....hhhhhhhheee..........eeeeeee...........hhhhh....eeeee....eeeeeeeeeeee........---.....eeeeeeeeeee....eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1t2o A 61 AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSmVYFKVGNETRKYKmTSIRDVKPTDVGVL---KGKDKQLTLITADDYNEKTGVWEKRKIFVATEVK 206
70 80 90 100 110 120 130 140| 150 | 160 |- | 180 190 200
141-MSE 155-MSE 169 173
Chain B from PDB Type:PROTEIN Length:138
aligned with Q9S446_STAAU | Q9S446 from UniProtKB/TrEMBL Length:206
Alignment length:142
73 83 93 103 113 123 133 143 153 163 173 183 193 203
Q9S446_STAAU 64 QIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEV 205
SCOP domains d1t2ob_ B: Sortase A SCOP domains
CATH domains 1t2oB00 B:64-205 [code=2.40.260.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeeehhhheeeee.....hhhhhhhh.ee..........eeeeeee...........hhhhh....eeeeee..eeeeeee......hhhhh..----.....eeeeeeeeeee....eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1t2o B 64 QIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSmVYFKVGNETRKYKmTSIRDVKPTDVGV----KGKDKQLTLITADDYNEKTGVWEKRKIFVATEV 205
73 83 93 103 113 123 133 143 153 | 163 | 173 183 193 203
141-MSE 155-MSE 168 173
Chain C from PDB Type:PROTEIN Length:144
aligned with Q9S446_STAAU | Q9S446 from UniProtKB/TrEMBL Length:206
Alignment length:144
72 82 92 102 112 122 132 142 152 162 172 182 192 202
Q9S446_STAAU 63 PQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEVK 206
SCOP domains d1t2oc_ C: Sortase A SCOP domains
CATH domains 1t2oC00 C:63-206 [code=2.40.260.10, no name defined] CATH domains
Pfam domains (1) -------------Sortase-1t2oC01 C:76-205 - Pfam domains (1)
Pfam domains (2) -------------Sortase-1t2oC02 C:76-205 - Pfam domains (2)
Pfam domains (3) -------------Sortase-1t2oC03 C:76-205 - Pfam domains (3)
Sec.struct. author ...........eeeeehhhheeeee.....hhhhhhhh.ee..........eeeeeee...........hhhhh....eeeee....eeeeeeeeeeeehhhhh...........eeeeeeeeeee....eeeeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1t2o C 63 PQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSmVYFKVGNETRKYKmTSIRDVKPTDVGVLDEQKGKDKQLTLITADDYNEKTGVWEKRKIFVATEVK 206
72 82 92 102 112 122 132 142 152 | 162 172 182 192 202
141-MSE 155-MSE
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |