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(-) Description

Title :  STRUCTURE OF AN EFFECTOR INDUCED INACTIVATED STATE OF RIBULOSE BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE: THE BINARY COMPLEX BETWEEN ENZYME AND XYLULOSE BISPHOSPHATE
 
Authors :  J. Newman, S. Gutteridge
Date :  29 Mar 94  (Deposition) - 08 May 95  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Keywords :  Lyase (Carbon-Carbon) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Newman, S. Gutteridge
Structure Of An Effector-Induced Inactivated State Of Ribulose 1, 5-Bisphosphate Carboxylase/Oxygenase: The Binary Complex Between Enzyme And Xylulose 1, 5-Bisphosphate.
Structure V. 2 495 1994
PubMed-ID: 7922027  |  Reference-DOI: 10.1016/S0969-2126(00)00050-2
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LARGE CHAIN)
    Cell Line: S2
    Chains: A, B, C, D, E, F, G, H
    EC Number: 4.1.1.39
    Engineered: YES
    Organism Scientific: SYNECHOCOCCUS ELONGATUS
    Organism Taxid: 269084
    Strain: PCC 6301
 
Molecule 2 - RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (SMALL CHAIN)
    Cell Line: S2
    Chains: M, I, N, J, O, K, P, L
    EC Number: 4.1.1.39
    Engineered: YES
    Organism Scientific: SYNECHOCOCCUS ELONGATUS
    Organism Taxid: 269084
    Strain: PCC 6301

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric/Biological Unit (1, 8)
No.NameCountTypeFull Name
1XBP8Ligand/IonXYLULOSE-1,5-BISPHOSPHATE

(-) Sites  (32, 32)

Asymmetric Unit (32, 32)
No.NameEvidenceResiduesDescription
011PUNKNOWNLYS A:334 , GLY A:381 , GLY A:403 , GLY A:404NULL
021P2UNKNOWNLYS B:334 , GLY B:381 , GLY B:403 , GLY B:404NULL
031P3UNKNOWNLYS C:334 , GLY C:381 , GLY C:403 , GLY C:404NULL
041P4UNKNOWNLYS D:334 , GLY D:381 , GLY D:403 , GLY D:404NULL
051P5UNKNOWNLYS E:334 , GLY E:381 , GLY E:403 , GLY E:404NULL
061P6UNKNOWNLYS F:334 , GLY F:381 , GLY F:403 , GLY F:404NULL
071P7UNKNOWNLYS G:334 , GLY G:381 , GLY G:403 , GLY G:404NULL
081P8UNKNOWNLYS H:334 , GLY H:381 , GLY H:403 , GLY H:404NULL
092PUNKNOWNHIS A:327 , ARG A:295 , SER A:379NULL
102P2UNKNOWNHIS B:327 , ARG B:295 , SER B:379NULL
112P3UNKNOWNHIS C:327 , ARG C:295 , SER C:379NULL
122P4UNKNOWNHIS D:327 , ARG D:295 , SER D:379NULL
132P6UNKNOWNHIS F:327 , ARG F:295 , SER F:379NULL
142P7UNKNOWNHIS G:327 , ARG G:295 , SER G:379NULL
153P5UNKNOWNHIS E:327 , ARG E:295 , SER E:379NULL
163P8UNKNOWNHIS H:327 , ARG H:295 , SER H:379NULL
17AC1SOFTWARELYS A:175 , LYS A:177 , ASP A:203 , GLU A:204 , HIS A:294 , ARG A:295 , HIS A:327 , LYS A:334 , LEU A:335 , SER A:379 , GLY A:380 , GLY A:381 , GLY A:403 , GLY A:404 , HOH A:496 , HOH A:588 , HOH A:589 , HOH A:590 , HOH A:598 , HOH A:599 , GLU B:60 , THR B:65 , TRP B:66 , ASN B:123 , HOH B:477BINDING SITE FOR RESIDUE XBP A 476
18AC2SOFTWAREGLU A:60 , THR A:65 , TRP A:66 , ASN A:123 , HOH A:615 , LYS B:175 , LYS B:177 , ASP B:203 , GLU B:204 , HIS B:294 , ARG B:295 , HIS B:327 , LYS B:334 , LEU B:335 , SER B:379 , GLY B:380 , GLY B:381 , GLY B:403 , GLY B:404 , HOH B:479BINDING SITE FOR RESIDUE XBP B 476
19AC3SOFTWARELYS C:175 , LYS C:177 , ASP C:203 , GLU C:204 , HIS C:294 , ARG C:295 , HIS C:327 , LYS C:334 , LEU C:335 , SER C:379 , GLY C:380 , GLY C:381 , GLY C:403 , GLY C:404 , GLU D:60 , THR D:65 , TRP D:66 , ASN D:123BINDING SITE FOR RESIDUE XBP C 476
20AC4SOFTWAREGLU C:60 , THR C:65 , TRP C:66 , ASN C:123 , LYS D:175 , LYS D:177 , ASP D:203 , GLU D:204 , HIS D:294 , ARG D:295 , HIS D:327 , LYS D:334 , LEU D:335 , SER D:379 , GLY D:380 , GLY D:381 , GLY D:403 , GLY D:404BINDING SITE FOR RESIDUE XBP D 476
21AC5SOFTWARELYS E:175 , LYS E:177 , ASP E:203 , GLU E:204 , HIS E:294 , ARG E:295 , HIS E:327 , LYS E:334 , LEU E:335 , SER E:379 , GLY E:380 , GLY E:381 , GLY E:403 , GLY E:404 , GLU F:60 , THR F:65 , TRP F:66 , ASN F:123BINDING SITE FOR RESIDUE XBP E 476
22AC6SOFTWAREGLU E:60 , THR E:65 , TRP E:66 , ASN E:123 , LYS F:175 , LYS F:177 , ASP F:203 , GLU F:204 , HIS F:294 , ARG F:295 , HIS F:327 , LYS F:334 , LEU F:335 , SER F:379 , GLY F:380 , GLY F:381 , GLY F:403 , GLY F:404BINDING SITE FOR RESIDUE XBP F 476
23AC7SOFTWARELYS G:175 , LYS G:177 , ASP G:203 , GLU G:204 , HIS G:294 , ARG G:295 , HIS G:327 , LYS G:334 , LEU G:335 , SER G:379 , GLY G:380 , GLY G:381 , GLY G:403 , GLY G:404 , GLU H:60 , THR H:65 , TRP H:66 , ASN H:123BINDING SITE FOR RESIDUE XBP G 476
24AC8SOFTWAREGLU G:60 , THR G:65 , TRP G:66 , ASN G:123 , LYS H:175 , LYS H:177 , ASP H:203 , GLU H:204 , HIS H:294 , ARG H:295 , HIS H:327 , LYS H:334 , LEU H:335 , SER H:379 , GLY H:380 , GLY H:381 , GLY H:403 , GLY H:404BINDING SITE FOR RESIDUE XBP H 476
25BP2UNKNOWNLYS B:175 , ASP B:203 , GLU B:204 , HIS B:294 , LYS B:334 , SER B:379NULL
26BP3UNKNOWNLYS C:175 , ASP C:203 , GLU C:204 , HIS C:294 , LYS C:334 , SER C:379NULL
27BP4UNKNOWNLYS D:175 , ASP D:203 , GLU D:204 , HIS D:294 , LYS D:334 , SER D:379NULL
28BP5UNKNOWNLYS E:175 , ASP E:203 , GLU E:204 , HIS E:294 , LYS E:334 , SER E:379NULL
29BP6UNKNOWNLYS F:175 , ASP F:203 , GLU F:204 , HIS F:294 , LYS F:334 , SER F:379NULL
30BP7UNKNOWNLYS G:175 , ASP G:203 , GLU G:204 , HIS G:294 , LYS G:334 , SER G:379NULL
31BP8UNKNOWNLYS H:175 , ASP H:203 , GLU H:204 , HIS H:294 , LYS H:334 , SER H:379NULL
32XBPUNKNOWNLYS A:175 , ASP A:203 , GLU A:204 , HIS A:294 , LYS A:334 , SER A:379NULL

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:247 -B:247
2C:247 -D:247
3E:247 -F:247
4G:247 -H:247

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Lys A:175 -Pro A:176
2Lys B:175 -Pro B:176
3Lys C:175 -Pro C:176
4Lys D:175 -Pro D:176
5Lys E:175 -Pro E:176
6Lys F:175 -Pro F:176
7Lys G:175 -Pro G:176
8Lys H:175 -Pro H:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RSC)

(-) PROSITE Motifs  (1, 8)

Asymmetric/Biological Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RUBISCO_LARGEPS00157 Ribulose bisphosphate carboxylase large chain active site.RBL_SYNP6193-201
 
 
 
 
 
 
 		  8A:196-204
B:196-204
C:196-204
D:196-204
E:196-204
F:196-204
G:196-204
H:196-204

(-) Exons   (0, 0)

(no "Exon" information available for 1RSC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rsca2 A:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rsca1 A:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscA01 A:22-148  [code=3.30.70.150, no name defined]                                                                          1rscA02 A:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc A   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain B from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rscb2 B:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rscb1 B:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscB01 B:22-148  [code=3.30.70.150, no name defined]                                                                          1rscB02 B:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc B   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain C from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rscc2 C:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rscc1 C:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscC01 C:22-148  [code=3.30.70.150, no name defined]                                                                          1rscC02 C:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc C   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain D from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rscd2 D:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rscd1 D:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscD01 D:22-148  [code=3.30.70.150, no name defined]                                                                          1rscD02 D:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc D   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain E from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rsce2 E:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rsce1 E:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscE01 E:22-148  [code=3.30.70.150, no name defined]                                                                          1rscE02 E:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc E   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain F from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rscf2 F:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rscf1 F:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscF01 F:22-148  [code=3.30.70.150, no name defined]                                                                          1rscF02 F:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc F   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain G from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rscg2 G:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rscg1 G:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscG01 G:22-148  [code=3.30.70.150, no name defined]                                                                          1rscG02 G:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc G   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain H from PDB  Type:PROTEIN  Length:467
 aligned with RBL_SYNP6 | P00880 from UniProtKB/Swiss-Prot  Length:472

    Alignment length:467
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       
            RBL_SYNP6     6 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 472
               SCOP domains d1rsch2 H:9-147 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                            d1rsch1 H:148-475 Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -------------1rscH01 H:22-148  [code=3.30.70.150, no name defined]                                                                          1rscH02 H:149-467 Rubisco                                                                                                                                                                                                                                                                                                      -------- CATH domains
           Pfam domains (1) ------------RuBisCO_large_N-1rscH09 H:21-146                                                                                              -------RuBisCO_large-1rscH01 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (1)
           Pfam domains (2) ------------RuBisCO_large_N-1rscH10 H:21-146                                                                                              -------RuBisCO_large-1rscH02 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (2)
           Pfam domains (3) ------------RuBisCO_large_N-1rscH11 H:21-146                                                                                              -------RuBisCO_large-1rscH03 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (3)
           Pfam domains (4) ------------RuBisCO_large_N-1rscH12 H:21-146                                                                                              -------RuBisCO_large-1rscH04 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (4)
           Pfam domains (5) ------------RuBisCO_large_N-1rscH13 H:21-146                                                                                              -------RuBisCO_large-1rscH05 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (5)
           Pfam domains (6) ------------RuBisCO_large_N-1rscH14 H:21-146                                                                                              -------RuBisCO_large-1rscH06 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (6)
           Pfam domains (7) ------------RuBisCO_large_N-1rscH15 H:21-146                                                                                              -------RuBisCO_large-1rscH07 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (7)
           Pfam domains (8) ------------RuBisCO_large_N-1rscH16 H:21-146                                                                                              -------RuBisCO_large-1rscH08 H:154-462                                                                                                                                                                                                                                                                                      ------------- Pfam domains (8)
         Sec.struct. author ............hhhh...........eeeeeeeee.....hhhhhhhhhhh................hhhh..eeeeeee......eeeeeeee.........hhhhhhhhh........eeeeeeeeee..hhhh.........hhhhhhhh......eee..........hhhhhhhhhhhhh.....eee...........hhhhhhhhhhhhhhhhhhh.......ee.....hhhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhh..eeeee...hhhhh........hhhhhhhhhhh...eee...........hhhhhhhhhhhh........................eeeee.......hhhhhhhh....eee..hhhh.....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RUBISCO_L------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc H   9 SAAGYKAGVKDYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCYHIEPVQGEENSYFAFIAYPLDLFEEGSVTNILTSIVGNVFGFKAIRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELGMPIIMHDFLTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDRQRNHGIHFRVLAKCLRLSGGDHLHSGTVVGKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQDWASMPGVLPVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACVQARNEGRDLYREGGDILREAGKWSPELAAALDLWKEIKFEFETMDKL 475
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       


Chain I from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rsci_ I: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscI00 I:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc I   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain J from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rscj_ J: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscJ00 J:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc J   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain K from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rsck_ K: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscK00 K:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc K   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain L from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rscl_ L: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscL00 L:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc L   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain M from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rscm_ M: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscM00 M:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc M   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain N from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rscn_ N: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscN00 N:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc N   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain O from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rsco_ O: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscO00 O:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc O   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64                                                          


Chain P from PDB  Type:PROTEIN  Length:109
 aligned with RBS_SYNP6 | P04716 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:109
                                    11        21        31        41        51        61        71        81        91       101         
            RBS_SYNP6     2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRPGR 110
               SCOP domains d1rscp_ P: Ribulose 1,5-bisphosphate carboxylase-oxygenase                                                    SCOP domains
               CATH domains 1rscP00 P:2-122  [code=3.30.190.10, no name defined]                                                          CATH domains
           Pfam domains (1) ---------RuBisCO_small-1rscP01 P:11-121                                                                     - Pfam domains (1)
           Pfam domains (2) ---------RuBisCO_small-1rscP02 P:11-121                                                                     - Pfam domains (2)
           Pfam domains (3) ---------RuBisCO_small-1rscP03 P:11-121                                                                     - Pfam domains (3)
           Pfam domains (4) ---------RuBisCO_small-1rscP04 P:11-121                                                                     - Pfam domains (4)
           Pfam domains (5) ---------RuBisCO_small-1rscP05 P:11-121                                                                     - Pfam domains (5)
           Pfam domains (6) ---------RuBisCO_small-1rscP06 P:11-121                                                                     - Pfam domains (6)
           Pfam domains (7) ---------RuBisCO_small-1rscP07 P:11-121                                                                     - Pfam domains (7)
           Pfam domains (8) ---------RuBisCO_small-1rscP08 P:11-121                                                                     - Pfam domains (8)
         Sec.struct. author .....................hhhhhhhhhhhhhh..eeeeeee..........ee..........hhhhhhhhhhhhhh....eeeeeeee....eeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 1rsc P   2 SMKTLPKERRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKECQTVSFIVHRPGR 122
                                    11        21        31        41        51|       73        83        93       103       113         
                                                                            51|                                                          
                                                                             64
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 24)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: RuBisCO_large] (36)
(-)
Clan: no clan defined [family: RuBisCO_large_N] (27)
(-)
Clan: no clan defined [family: RuBisCO_small] (23)

(-) Gene Ontology  (11, 19)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (RBL_SYNP6 | P00880)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0009853    photorespiration    A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.

Chain I,J,K,L,M,N,O,P   (RBS_SYNP6 | P04716)
molecular function
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0004497    monooxygenase activity    Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016984    ribulose-bisphosphate carboxylase activity    Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.
biological process
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0019253    reductive pentose-phosphate cycle    The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBL_SYNP6 | P00880: 1rbl 2wvw 3rg6
        RBS_SYNP6 | P04716: 1rbl 1uzh

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1RSC)