Chain A from PDB Type:PROTEIN Length:244
aligned with ENDA_ARCFU | O29362 from UniProtKB/Swiss-Prot Length:305
Alignment length:244
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
ENDA_ARCFU 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGILSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
SCOP domains d1r0va1 A:62-139 Dimeric tRNA splicing endonuclease, domains 2 and 4 d1r0va3 A:140-214 Dimeric tRNA splicing endonuclease, domains 1 and 3 d1r0va2 A:215-305 Dimeric tRNA splicing endonuclease, domains 2 and 4 SCOP domains
CATH domains 1r0vA01 A:62-138 [code=3.40.1350.10, no name defined] 1r0vA02 A:139-213 [code=3.40.1170.20, no name defined] 1r0vA03 A:214-305 [code=3.40.1350.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhh....eee..eee...eeeeee.....hhhhhhhhh......eeeee.....eeeeeee..............eeeeee..eeee..hhhhhh....eee..eeeehhhhhhhhhhh..eee...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh..eeee.hhhh..eeee....hhhhhhhh.eeeee......hhhhhhhhhhhhhhh..eeeeee..eeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1r0v A 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
Chain B from PDB Type:PROTEIN Length:244
aligned with ENDA_ARCFU | O29362 from UniProtKB/Swiss-Prot Length:305
Alignment length:244
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
ENDA_ARCFU 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGILSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
SCOP domains d1r0vb1 B:62-139 Dimeric tRNA splicing endonuclease, domains 2 and 4 d1r0vb3 B:140-214 Dimeric tRNA splicing endonuclease, domains 1 and 3 d1r0vb2 B:215-305 Dimeric tRNA splicing endonuclease, domains 2 and 4 SCOP domains
CATH domains 1r0vB01 B:62-138 [code=3.40.1350.10, no name defined] 1r0vB02 B:139-213 [code=3.40.1170.20, no name defined] 1r0vB03 B:214-305 [code=3.40.1350.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhh....eee..eee...eeeeee...eehhhhhhhhhh.....eeeee.....eeeeeee..............eeeeee..eeee..hhhhhh....eee..eeeeehhhhhhhhhh..eee...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh..eeee.hhhh..eeee....hhhhhhhh.eeeee.....eehhhhhhhhhhhhhh..eeeeee..eeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1r0v B 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
Chain C from PDB Type:PROTEIN Length:244
aligned with ENDA_ARCFU | O29362 from UniProtKB/Swiss-Prot Length:305
Alignment length:244
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
ENDA_ARCFU 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGILSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
SCOP domains d1r0vc1 C:62-139 Dimeric tRNA splicing endonuclease, domains 2 and 4 d1r0vc3 C:140-214 Dimeric tRNA splicing endonuclease, domains 1 and 3 d1r0vc2 C:215-305 Dimeric tRNA splicing endonuclease, domains 2 and 4 SCOP domains
CATH domains 1r0vC01 C:62-138 [code=3.40.1350.10, no name defined] 1r0vC02 C:139-213 [code=3.40.1170.20, no name defined] 1r0vC03 C:214-305 [code=3.40.1350.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhh....eee..eee...eeeeee...eehhhhhhhhhh.....eeeee.....eeeeeee..............eeeeee..eeee..hhhhhh....eee..eeeehhhhhhhhhhh..eee...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh..eeee.hhhh..eeee....hhhhhhhh.eeeee.....eehhhhhhhhhhhhhh..eeeeee..eeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1r0v C 62 DFSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
Chain D from PDB Type:PROTEIN Length:243
aligned with ENDA_ARCFU | O29362 from UniProtKB/Swiss-Prot Length:305
Alignment length:243
72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302
ENDA_ARCFU 63 FSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGILSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
SCOP domains d1r0vd1 D:63-139 Dimeric tRNA splicing endonuclease, domains 2 and 4 d1r0vd3 D:140-214 Dimeric tRNA splicing endonuclease, domains 1 and 3 d1r0vd2 D:215-305 Dimeric tRNA splicing endonuclease, domains 2 and 4 SCOP domains
CATH domains 1r0vD01 D:63-138 [code=3.40.1350.10, no name defined] 1r0vD02 D:139-213 [code=3.40.1170.20, no name defined] 1r0vD03 D:214-305 [code=3.40.1350.10, no name defined] CATH domains
Pfam domains (1) --------------------------------------------------------------------------------------tRNA_int_endo_N-1r0vD05 D:149-209 ------tRNA_int_endo-1r0vD01 D:216-299 ------ Pfam domains (1)
Pfam domains (2) --------------------------------------------------------------------------------------tRNA_int_endo_N-1r0vD06 D:149-209 ------tRNA_int_endo-1r0vD02 D:216-299 ------ Pfam domains (2)
Pfam domains (3) --------------------------------------------------------------------------------------tRNA_int_endo_N-1r0vD07 D:149-209 ------tRNA_int_endo-1r0vD03 D:216-299 ------ Pfam domains (3)
Pfam domains (4) --------------------------------------------------------------------------------------tRNA_int_endo_N-1r0vD08 D:149-209 ------tRNA_int_endo-1r0vD04 D:216-299 ------ Pfam domains (4)
Sec.struct. author .hhhhhhhhhhhhh....eee..eee...eeeeee...eehhhhhhhhhh.....eeeee.....eeeeeee..............eeeeee..eeee..hhhhhh....eee..eeeehhhhhhhhhhh..eee...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh..eeee.hhhh..eeee....hhhhhhhh.eeeee.....eehhhhhhhhhhhhhh..eeeeee..eeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1r0v D 63 FSTYYFVYEDLRDRGNKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRLAQNVRKRMVFAYGKNYLCFERVKV 305
72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |