Chain A from PDB Type:PROTEIN Length:126
aligned with SP0A_GEOSE | P52934 from UniProtKB/Swiss-Prot Length:259
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
SP0A_GEOSE 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVV 128
SCOP domains d1qmpa_ A: Sporulation response regulator Spo0A SCOP domains
CATH domains 1qmpA00 A:2-128 [code=3.40.50.2300, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhh...eeee.......hhhhhhhhhhhhh....eeeeee...hhhhhhhhhhh...eeee...hhhhhhhhhhhhhh.-.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RESPONSE_REGULATORY PDB: A:4-121 UniProt: 4-121 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmp A 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLdIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGK-TPVV 128
11 21 31 41 51 | 61 71 81 91 101 111 121 | |
55-PHD 123 |
125
Chain B from PDB Type:PROTEIN Length:121
aligned with SP0A_GEOSE | P52934 from UniProtKB/Swiss-Prot Length:259
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
SP0A_GEOSE 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVV 128
SCOP domains d1qmpb_ B: Sporulation response regulator Spo0A SCOP domains
CATH domains 1qmpB00 B:2-128 [code=3.40.50.2300, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhh...eeee.......hhhhhhhhhhh----..eeeeee...hhhhhhhhhhh...eeee...hhhhhhhhhhhhhh--.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RESPONSE_REGULATORY PDB: B:4-121 UniProt: 4-121 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmp B 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLdIIMPHLDGLAVLERIRA----QPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYG--TPVV 128
11 21 31 41 51 | 61 71| | 81 91 101 111 121| |
55-PHD 72 77 122 |
125
Chain C from PDB Type:PROTEIN Length:126
aligned with SP0A_GEOSE | P52934 from UniProtKB/Swiss-Prot Length:259
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
SP0A_GEOSE 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVV 128
SCOP domains d1qmpc_ C: Sporulation response regulator Spo0A SCOP domains
CATH domains 1qmpC00 C:2-128 [code=3.40.50.2300, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhh...eeee.......hhhhhhhhhhhhh....eeeeee...hhhhhhhhhhh...eeee...hhhhhhhhhhhhhh.-.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RESPONSE_REGULATORY PDB: C:4-121 UniProt: 4-121 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmp C 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLdIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGK-TPVV 128
11 21 31 41 51 | 61 71 81 91 101 111 121 | |
55-PHD 123 |
125
Chain D from PDB Type:PROTEIN Length:125
aligned with SP0A_GEOSE | P52934 from UniProtKB/Swiss-Prot Length:259
Alignment length:127
11 21 31 41 51 61 71 81 91 101 111 121
SP0A_GEOSE 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVV 128
SCOP domains d1qmpd_ D: Sporulation response regulator Spo0A SCOP domains
CATH domains 1qmpD00 D:2-128 [code=3.40.50.2300, no name defined] CATH domains
Pfam domains (1) ---Response_reg-1qmpD01 D:5-118 ---------- Pfam domains (1)
Pfam domains (2) ---Response_reg-1qmpD02 D:5-118 ---------- Pfam domains (2)
Pfam domains (3) ---Response_reg-1qmpD03 D:5-118 ---------- Pfam domains (3)
Pfam domains (4) ---Response_reg-1qmpD04 D:5-118 ---------- Pfam domains (4)
Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhh...eeee.......hhhhhhhhhhh.--...eeeeee...hhhhhhhhhhh...eeee...hhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --RESPONSE_REGULATORY PDB: D:4-121 UniProt: 4-121 ------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmp D 2 SIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLdIIMPHLDGLAVLERIRAG--HQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVV 128
11 21 31 41 51 | 61 71 | | 81 91 101 111 121
55-PHD 73 76
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |