Chain A from PDB Type:PROTEIN Length:335
aligned with RTCA_ECOLI | P46849 from UniProtKB/Swiss-Prot Length:338
Alignment length:335
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
RTCA_ECOLI 4 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 338
SCOP domains d1qmia2 A:5-184,A:280-339 RNA 3'-terminal phosphate cyclase, RPTC d1qmia1 A:185-279 RNA 3'-terminal phosphate cyclase, RPTC, insert domain d1qmia2 A:5-184,A:280-339 SCOP domains
CATH domains -1qmiA01 A:6-182,A:277-336 [code=3.65.10.20, no name defined] ---1qmiA02 A:186-276 [code=3.30.360.20, no name defined] 1qmiA01 A:6-182,A:277-336 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhhhh..eee............hhhhhhhhhhhhhhh..eee........eeee.......eeeee.....hhhhhhhhhhhhhhhh...eeeeeee........hhhhhhhhhhhhhhhh..eeeeeeee........eeeeeeee....................eeeeee..hhhhhhhhhhhhhhhh....eeeeeehhhhh.eeeeeeeee....eeeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhhh...eeeee....eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------RTC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmi A 5 mIALDGAQGEGGGQILRSALSLSmITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQmRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPmALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 339
| 14 24 | 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334
| 28-MSE 192-MSE 293-MSE
5-MSE
Chain B from PDB Type:PROTEIN Length:335
aligned with RTCA_ECOLI | P46849 from UniProtKB/Swiss-Prot Length:338
Alignment length:335
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
RTCA_ECOLI 4 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 338
SCOP domains d1qmib2 B:5-184,B:280-339 RNA 3'-terminal phosphate cyclase, RPTC d1qmib1 B:185-279 RNA 3'-terminal phosphate cyclase, RPTC, insert domain d1qmib2 B:5-184,B:280-339 SCOP domains
CATH domains -1qmiB01 B:6-182,B:277-336 [code=3.65.10.20, no name defined] ---1qmiB02 B:186-276 [code=3.30.360.20, no name defined] 1qmiB01 B:6-182,B:277-336 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhhhh..eee............hhhhhhhhhhhhhhh..eee........eeee.......eee.......hhhhhhhhhhhhh......eeeeeee.........hhhhhhhhhhhhhhh..eeeeeeee........eeeeeeee....................eeeeee...hhhhhhhhhhhhhhh....eeeeeehhhhh.eeeeeeeee....eeeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh...eeeee....eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------RTC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmi B 5 mIALDGAQGEGGGQILRSALSLSmITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQmRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPmALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 339
| 14 24 | 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334
5-MSE 28-MSE 192-MSE 293-MSE
Chain C from PDB Type:PROTEIN Length:335
aligned with RTCA_ECOLI | P46849 from UniProtKB/Swiss-Prot Length:338
Alignment length:335
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
RTCA_ECOLI 4 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 338
SCOP domains d1qmic2 C:5-184,C:280-339 RNA 3'-terminal phosphate cyclase, RPTC d1qmic1 C:185-279 RNA 3'-terminal phosphate cyclase, RPTC, insert domain d1qmic2 C:5-184,C:280-339 SCOP domains
CATH domains -1qmiC01 C:6-182,C:277-336 [code=3.65.10.20, no name defined] ---1qmiC02 C:186-276 [code=3.30.360.20, no name defined] 1qmiC01 C:6-182,C:277-336 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhhhh..eee............hhhhhhhhhhhhhhh..eee........eeee......eeeeee.....hhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhh..eeeeeeee........eeeeeeee....................eeeeee..hhhhhhhhhhhhhhhh....eeeeeehhhhh.eeeeeeeee....eeeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhhhhh...eeeee....eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------RTC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmi C 5 mIALDGAQGEGGGQILRSALSLSmITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQmRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPmALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 339
| 14 24 | 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334
5-MSE 28-MSE 192-MSE 293-MSE
Chain D from PDB Type:PROTEIN Length:335
aligned with RTCA_ECOLI | P46849 from UniProtKB/Swiss-Prot Length:338
Alignment length:335
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333
RTCA_ECOLI 4 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 338
SCOP domains d1qmid2 D:5-184,D:280-339 RNA 3'-terminal phosphate cyclase, RPTC d1qmid1 D:185-279 RNA 3'-terminal phosphate cyclase, RPTC, insert domain d1qmid2 D:5-184,D:280-339 SCOP domains
CATH domains -1qmiD01 D:6-182,D:277-336 [code=3.65.10.20, no name defined] ---1qmiD02 D:186-276 [code=3.30.360.20, no name defined] 1qmiD01 D:6-182,D:277-336 --- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ............hhhhhhhhhhhhhhh..eee............hhhhhhhhhhhhhhh..eee........eeee.................hhhhhhhhhhhhhh.....eeeeeee.........hhhhhhhhhhhhhhh..eeeeeeee........eeeeeeee....................eeeeee....hhhhhhhhhhhh......eeeeeehhhhh.eeeeeeeee....eeeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhh...eeeee....eeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------RTC --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qmi D 5 mIALDGAQGEGGGQILRSALSLSmITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQmRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPmALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE 339
| 14 24 | 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334
5-MSE 28-MSE 192-MSE 293-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |