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(-) Description

Title :  VANADIUM BROMOPEROXIDASE FROM RED ALGA CORALLINA OFFICINALIS
 
Authors :  M. N. Isupov, A. R. Dalby, A. A. Brindley, J. A. Littlechild
Date :  11 May 99  (Deposition) - 05 Jul 00  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D,E,F  (2x)
Keywords :  Red Alga, Halogenation, Vanadium-Dependent, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. N. Isupov, A. R. Dalby, A. A. Brindley, Y. Izumi, T. Tanabe, G. N. Murshudov, J. A. Littlechild
Crystal Structure Of Dodecameric Vanadium-Dependent Bromoperoxidase From The Red Algae Corallina Officinalis.
J. Mol. Biol. V. 299 1035 2000
PubMed-ID: 10843856  |  Reference-DOI: 10.1006/JMBI.2000.3806
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HALOPEROXIDASE
    Chains: A, B, C, D, E, F
    EC Number: 1.11.1.10
    Organism Scientific: CORALLINA OFFICINALIS
    Organism Taxid: 35170

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (2x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1CA6Ligand/IonCALCIUM ION
2PO46Ligand/IonPHOSPHATE ION
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2PO412Ligand/IonPHOSPHATE ION

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:398 , ARG A:406 , PRO A:476 , HIS A:478 , SER A:483 , GLY A:484 , HIS A:485 , ARG A:545 , HIS A:551BINDING SITE FOR RESIDUE PO4 A 3000
02AC2SOFTWAREPHE A:359 , GLN A:361 , ASP A:363 , ASP A:366 , GLN A:368BINDING SITE FOR RESIDUE CA A 3001
03AC3SOFTWARELYS B:398 , ARG B:406 , PRO B:476 , HIS B:478 , SER B:483 , GLY B:484 , HIS B:485 , ARG B:545 , HIS B:551BINDING SITE FOR RESIDUE PO4 B 3002
04AC4SOFTWAREPHE B:359 , GLN B:361 , ASP B:363 , ASP B:366 , GLN B:368BINDING SITE FOR RESIDUE CA B 3003
05AC5SOFTWARELYS C:398 , ARG C:406 , PRO C:476 , HIS C:478 , SER C:483 , GLY C:484 , HIS C:485 , ARG C:545 , HIS C:551BINDING SITE FOR RESIDUE PO4 C 3004
06AC6SOFTWAREPHE C:359 , GLN C:361 , ASP C:363 , ASP C:366 , GLN C:368BINDING SITE FOR RESIDUE CA C 3005
07AC7SOFTWARELYS D:398 , ARG D:406 , PRO D:476 , HIS D:478 , SER D:483 , GLY D:484 , HIS D:485 , ARG D:545 , HIS D:551 , HOH D:3267BINDING SITE FOR RESIDUE PO4 D 3006
08AC8SOFTWAREPHE D:359 , GLN D:361 , ASP D:363 , ASP D:366 , GLN D:368BINDING SITE FOR RESIDUE CA D 3007
09AC9SOFTWARELYS E:398 , ARG E:406 , PRO E:476 , HIS E:478 , SER E:483 , GLY E:484 , HIS E:485 , ARG E:545 , HIS E:551 , HOH E:3334BINDING SITE FOR RESIDUE PO4 E 3008
10BC1SOFTWAREPHE E:359 , GLN E:361 , ASP E:363 , ASP E:366 , GLN E:368BINDING SITE FOR RESIDUE CA E 3009
11BC2SOFTWARELYS F:398 , ARG F:406 , PRO F:476 , HIS F:478 , SER F:483 , GLY F:484 , HIS F:485 , ARG F:545 , HIS F:551BINDING SITE FOR RESIDUE PO4 F 3010
12BC3SOFTWAREPHE F:359 , GLN F:361 , ASP F:363 , ASP F:366 , GLN F:368BINDING SITE FOR RESIDUE CA F 3011
13CAAAUTHORPHE A:359 , GLN A:361 , ASP A:363 , ASP A:366CALCIUM BINDING SITE IN SUBUNIT A
14CABAUTHORPHE E:359 , GLN E:361 , ASP E:363 , ASP E:366CALCIUM BINDING SITE IN SUBUNIT B
15CACAUTHORPHE E:359 , GLN E:361 , ASP E:363 , ASP E:366CALCIUM BINDING SITE IN SUBUNIT C
16CADAUTHORPHE D:359 , GLN D:361 , ASP D:363 , ASP D:366CALCIUM BINDING SITE IN SUBUNIT D
17CAEAUTHORPHE E:359 , GLN E:361 , ASP E:363 , ASP E:366CALCIUM BINDING SITE IN SUBUNIT E
18CAFAUTHORPHE F:359 , GLN F:361 , ASP F:363 , ASP F:366CALCIUM BINDING SITE IN SUBUNIT F
19VAAAUTHORLYS A:398 , ARG A:406 , SER A:483 , GLY A:484 , HIS A:485 , ARG A:545 , HIS A:551VANADATE BINDING SITE IN SUBUNIT A
20VABAUTHORLYS E:398 , ARG E:406 , SER E:483 , GLY E:484 , HIS E:485 , ARG E:545 , HIS E:551VANADATE BINDING SITE IN SUBUNIT B
21VACAUTHORLYS E:398 , ARG E:406 , SER E:483 , GLY E:484 , HIS E:485 , ARG E:545 , HIS E:551VANADATE BINDING SITE IN SUBUNIT C
22VADAUTHORLYS D:398 , ARG D:406 , SER D:483 , GLY D:484 , HIS D:485 , ARG D:545 , HIS D:551VANADATE BINDING SITE IN SUBUNIT D
23VAEAUTHORLYS E:398 , ARG E:406 , SER E:483 , GLY E:484 , HIS E:485 , ARG E:545 , HIS E:551VANADATE BINDING SITE IN SUBUNIT E
24VAFAUTHORLYS F:398 , ARG F:406 , SER F:483 , GLY F:484 , HIS F:485 , ARG F:545 , HIS F:551VANADATE BINDING SITE IN SUBUNIT F

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1QHB)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Tyr A:481 -Gly A:482
2Gly A:526 -Pro A:527
3Tyr B:481 -Gly B:482
4Gly B:526 -Pro B:527
5Tyr C:481 -Gly C:482
6Gly C:526 -Pro C:527
7Tyr D:481 -Gly D:482
8Gly D:526 -Pro D:527
9Tyr E:481 -Gly E:482
10Gly E:526 -Pro E:527
11Tyr F:481 -Gly F:482
12Gly F:526 -Pro F:527

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1QHB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1QHB)

(-) Exons   (0, 0)

(no "Exon" information available for 1QHB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhba_ A: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbA00 A:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.........hhh.....--.........................hhhhhhhhhhhhh..hhhhh...................hhhhh............hhh......................hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhhh.hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee...............hhhhhhhh....................hhhhhhhhhh....hhhhhhhhhhhhh.............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb A   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhbb_ B: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbB00 B:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.................--.........................hhhhhhhhhhhhh..hhhhh...................hhhhhh...........hhh......................hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhh..hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee...............hhhhhhhh....................hhhhhhhhhh....hhhhhhhhhhhh..............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb B   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     


Chain C from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhbc_ C: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbC00 C:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.................--.........................hhhhhhhhhhhhh..hhhhh...................hhhhh............hhh......................hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhh..hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee...............hhhhhhhh....................hhhhhhhhhh....hhhhhhhhhhhh..............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb C   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     


Chain D from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhbd_ D: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbD00 D:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.................--.........................hhhhhhhhhhhhh..hhhhh...................hhhhhh...........hhh........hhh...........hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhh..hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee..eeee.........hhhhhhhh..........eeeeee....hhhhhhhhhh....hhhhhhhhhhhh..............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb D   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     


Chain E from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhbe_ E: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbE00 E:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhh..................--.........................hhhhhhhhhhhhh..hhhhh...................hhhhh............hhh......................hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhhh.hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee...............hhhhhhhh....................hhhhhhhhhh....hhhhhhhhhhhh..............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh.....hhhhhhhhh.hhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb E   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     


Chain F from PDB  Type:PROTEIN  Length:595
 aligned with PRXV_COROI | Q8LLW7 from UniProtKB/Swiss-Prot  Length:598

    Alignment length:597
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       
           PRXV_COROI     2 GIPADNLQSRAKASFDTRVSAAELALARGVVPSLANGEELLYRNPDPENGDPSFIVSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIADLTLGPARDPDTGLPIWRSDLANSLELEVRGWENSSAGLTFDLEGPDAQSIAMPPAPVLTSPELIAEIAELYLMALGREIEFSEFDSPKNAEYIQFAIDQLNGLEWFNTPAMLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQYIIVGSKQIGSATGGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDALYEAYLNACLILLANRVPFDPNIPFQQEDKLDNQDVFVNFGDAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKIAAEKGESVFPEVDLAVEELEDILEKAEISNRKQNIADGDPDPDPSFLLPQAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSNFQIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESILLGEQVAIGILEEQSLTYGENFFFNLPKFDGTTIQI 598
               SCOP domains d1qhbf_ F: Haloperoxidase (bromoperoxidase)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1qhbF00 F:2-596 Vanadium-containing Chloroper  oxidase, domain 2                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.................--.........................hhhhhhhhhhhhh..hhhhh...................hhhhh............hhh......................hhhhhhhhhhhhhhh.....hhh...hhhhhhhhhhhhhhh..hhhh........hhhhhh.........................hhh.........eee..eee....hhhhhh.eeee..eeee..eeee.........hhhhhhhh..........eeeeee....hhhhhhhhhh....hhhhhhhhhhhhh.............hhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhh...........................hhhhhhhhhhhhhhhh..........eee......eee........hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......eee.....eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhb F   2 GIPADNLQSRAKASFDTRVAAAELALARGAVPSFANGEELLYRNS--ETGDPSFIGSFTKGLPHDDNGAIIDPDDFLAFVRAINSGDEKEIAALTLGPARDPETGLPIWRSDLANSLDLEVRGWENSSAGLTFDLEGPDAQSVAMPPAPVLTSPELIAEMAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLEWFNTPAKLGDPPAEIRRRRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSATVGNKTLVSPNAADEFDGEIAYGSITISQRVRIATPGRDFMTDLKVFLDVQDAADFRGFESYEPGARLIRTIRDLATWVHFDSLYEAYLNACLILLANGVPFDPNLPFQQEDKLDNQDVFVNFGSAHVLSLVTEVATRALKAVRYQKFNIHRRLRPEATGGLISVNKNAFLKSESVFPEVDVLVEELSSILDDSASSNEKQNIADGDVSPGKSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGENFFFNLPKFDGTTIQI 596
                                    11        21        31        41    |  |49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       
                                                                       46 47
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1QHB)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (PRXV_COROI | Q8LLW7)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0004601    peroxidase activity    Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
biological process
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  1qhb
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  1.11.1.10
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 Related Entries

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