Chain A from PDB Type:DNA Length:20
1per A 1 AAGTACAGTTTTTCTTGTAT 20
10 20
Chain B from PDB Type:DNA Length:20
1per B 1 TATACAAGAAAAACTGTACT 20
10 20
Chain L from PDB Type:PROTEIN Length:63
aligned with RPC1_BP434 | P16117 from UniProtKB/Swiss-Prot Length:95
Alignment length:63
11 21 31 41 51 61
RPC1_BP434 2 SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGT 64
SCOP domains d1perl_ L: 434 C1 repressor, DNA-binding domain SCOP domains
CATH domains 1perL00 L:1-63 lambda repressor-like DNA-binding domains CATH domains
Pfam domains --------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhh....hhhhhhh....hhhhhhhhh........hhhhhhh....hhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
PROSITE -----HTH_CROC1 PDB: L:6-59 UniProt: 7-60 ---- PROSITE
Transcript --------------------------------------------------------------- Transcript
1per L 1 SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGT 63
10 20 30 40 50 60
Chain R from PDB Type:PROTEIN Length:63
aligned with RPC1_BP434 | P16117 from UniProtKB/Swiss-Prot Length:95
Alignment length:63
11 21 31 41 51 61
RPC1_BP434 2 SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGT 64
SCOP domains d1perr_ R: 434 C1 repressor, DNA-binding domain SCOP domains
CATH domains 1perR00 R:1-63 lambda repressor-like DNA-binding domains CATH domains
Pfam domains (1) -----HTH_3-1perR01 R:6-59 ---- Pfam domains (1)
Pfam domains (2) -----HTH_3-1perR02 R:6-59 ---- Pfam domains (2)
Sec.struct. author hhhhhhhhhhhh....hhhhhhh....hhhhhhhhh........hhhhhhh....hhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
PROSITE -----HTH_CROC1 PDB: R:6-59 UniProt: 7-60 ---- PROSITE
Transcript --------------------------------------------------------------- Transcript
1per R 1 SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGT 63
10 20 30 40 50 60
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |