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(-) Description

Title :  CRYSTAL STRUCTURE OF FKBP52 C-TERMINAL DOMAIN
 
Authors :  B. Wu, P. Li, Z. Lou, C. Shu, Y. Ding, B. Shen, Z. Rao
Date :  28 Apr 03  (Deposition) - 22 Jun 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (2x)
Keywords :  Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. Wu, P. Li, Y. Liu, Z. Lou, Y. Ding, C. Shu, S. Ye, M. Bartlam, B. Shen, Z. Rao
3D Structure Of Human Fk506-Binding Protein 52: Implication For The Assembly Of The Glucocorticoid Receptor/Hsp90/Immunophilin Heterocomplex
Proc. Natl. Acad. Sci. Usa V. 101 8348 2004
PubMed-ID: 15159550  |  Reference-DOI: 10.1073/PNAS.0305969101

(-) Compounds

Molecule 1 - FK506-BINDING PROTEIN 4
    ChainsA, B, C
    EC Number5.2.1.8
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentFKBP52 C-TERMINAL DOMAIN
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFKBP52

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABC
Biological Unit 1 (2x)ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 15)

Asymmetric Unit (2, 15)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2SO49Ligand/IonSULFATE ION
Biological Unit 1 (2, 30)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2SO418Ligand/IonSULFATE ION

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:152 , ARG A:210 , ASN C:367 , ARG C:399BINDING SITE FOR RESIDUE SO4 A 1001
2AC2SOFTWARELYS A:232 , GLU A:233 , LYS A:234 , HOH A:1026 , HOH A:1055 , HOH A:1175 , LYS B:179BINDING SITE FOR RESIDUE SO4 A 1002
3AC3SOFTWARETYR A:383 , PRO A:384 , ASN A:385BINDING SITE FOR RESIDUE SO4 A 1003
4AC4SOFTWAREASN A:367 , ARG A:399 , ARG B:152 , ARG B:210BINDING SITE FOR RESIDUE SO4 A 1004
5AC5SOFTWARELYS B:232 , GLU B:233 , LYS B:234 , LYS C:179BINDING SITE FOR RESIDUE SO4 B 1005
6AC6SOFTWARETYR B:383 , PRO B:384 , ASN B:385 , HOH B:1112 , HOH B:1175BINDING SITE FOR RESIDUE SO4 B 1006
7AC7SOFTWARELYS A:179 , LYS C:232 , GLU C:233 , LYS C:234BINDING SITE FOR RESIDUE SO4 C 1007
8AC8SOFTWAREASP C:349 , ASN C:351 , ASN C:352 , TYR C:383 , HOH C:1019BINDING SITE FOR RESIDUE SO4 C 1008
9AC9SOFTWARETYR C:383 , PRO C:384 , ASN C:385 , HOH C:1184BINDING SITE FOR RESIDUE SO4 C 1009

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1P5Q)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1P5Q)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1P5Q)

(-) PROSITE Motifs  (3, 15)

Asymmetric Unit (3, 15)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FKBP_PPIASEPS50059 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.FKBP4_HUMAN50-138
167-253
 
 
  3-
A:167-253
B:167-253
C:167-253
2TPRPS50005 TPR repeat profile.FKBP4_HUMAN270-303
 
 
319-352
 
 
353-386
 
 
  9A:270-303
B:270-303
C:270-303
A:319-352
B:319-352
C:319-352
A:353-386
B:353-386
C:353-386
3TPR_REGIONPS50293 TPR repeat region circular profile.FKBP4_HUMAN270-303
 
 
319-386
 
 
  6A:270-303
B:270-303
C:270-303
A:319-386
B:319-386
C:319-386
Biological Unit 1 (3, 36)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FKBP_PPIASEPS50059 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.FKBP4_HUMAN50-138
167-253
 
 
  6-
A:167-253
B:167-253
C:167-253
2TPRPS50005 TPR repeat profile.FKBP4_HUMAN270-303
 
 
319-352
 
 
353-386
 
 
  18A:270-303
B:270-303
C:270-303
A:319-352
B:319-352
C:319-352
A:353-386
B:353-386
C:353-386
3TPR_REGIONPS50293 TPR repeat region circular profile.FKBP4_HUMAN270-303
 
 
319-386
 
 
  12A:270-303
B:270-303
C:270-303
A:319-386
B:319-386
C:319-386

(-) Exons   (7, 21)

Asymmetric Unit (7, 21)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000000010081ENSE00000802791chr12:2904119-2904410292FKBP4_HUMAN1-35350--
1.2ENST000000010082ENSE00000713106chr12:2906304-2906448145FKBP4_HUMAN36-84490--
1.3ENST000000010083ENSE00000713108chr12:2906895-2907037143FKBP4_HUMAN84-131480--
1.4ENST000000010084ENSE00000713109chr12:2907872-2907992121FKBP4_HUMAN132-172413A:145-172
B:145-172
C:145-172
28
28
28
1.5ENST000000010085ENSE00000713111chr12:2908254-2908410157FKBP4_HUMAN172-224533A:172-224
B:172-224
C:172-224
53
53
53
1.6ENST000000010086ENSE00000713114chr12:2909016-290910691FKBP4_HUMAN224-254313A:224-254
B:224-254
C:224-254
31
31
31
1.7ENST000000010087ENSE00000713116chr12:2909205-290928884FKBP4_HUMAN255-282283A:255-282
B:255-282
C:255-282
28
28
28
1.8ENST000000010088ENSE00000713118chr12:2909558-2909743186FKBP4_HUMAN283-344623A:283-344
B:283-344
C:283-344
62
62
62
1.9ENST000000010089ENSE00000713120chr12:2910283-2910522240FKBP4_HUMAN345-424803A:345-424
B:345-424
C:345-424
80
80
80
1.10ENST0000000100810ENSE00000802792chr12:2912317-2913124808FKBP4_HUMAN425-459353A:425-427
B:425-427
C:425-427
3
3
3

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:283
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:283
                                   154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
          FKBP4_HUMAN   145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
               SCOP domains d1p5qa2 A:145-257 FKBP52, N-terminal domains                                                                     d1p5qa1 A:258-427 FKBP52 (FKBP4), C-terminal domain                                                                                                                        SCOP domains
               CATH domains 1p5qA01 A:145-260  [code=3.10.50.40, no name defined]                                                               -1p5qA02 A:262-427  [code=1.25.40.10, no name defined]                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee............eeeeeeeeee..eeeeeeeeeee..hhhhhh.hhhhhhhhh......eeeeee..........hhhhh......eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------FKBP_PPIASE  PDB: A:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: A:270-303        ---------------TPR_REGION  PDB: A:319-386 UniProt: 319-386                         ----------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------TPR  PDB: A:270-303               ---------------TPR  PDB: A:319-352               TPR  PDB: A:353-386               ----------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: A:145-172    ---------------------------------------------------Exon 1.6  PDB: A:224-254       Exon 1.7  PDB: A:255-282    Exon 1.8  PDB: A:283-344 UniProt: 283-344                     Exon 1.9  PDB: A:345-424 UniProt: 345-424                                       1.1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------Exon 1.5  PDB: A:172-224 UniProt: 172-224            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1p5q A 145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRmEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEmNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
                                   154       164       174       184       194       204      |214       224       234       244       254      |264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
                                                                                            211-MSE                                           261-MSE                                                                                                                                                                  

Chain B from PDB  Type:PROTEIN  Length:283
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:283
                                   154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
          FKBP4_HUMAN   145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
               SCOP domains d1p5qb2 B:145-257 FKBP52, N-terminal domains                                                                     d1p5qb1 B:258-427 FKBP52 (FKBP4), C-terminal domain                                                                                                                        SCOP domains
               CATH domains 1p5qB01 B:145-260  [code=3.10.50.40, no name defined]                                                               -1p5qB02 B:262-427  [code=1.25.40.10, no name defined]                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeee............eeeeeeeeee..eeeeeeeeeee..hhhhhh.hhhhhhhhh......eeeeee.hhhh................eeeeeeeeeee........hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------FKBP_PPIASE  PDB: B:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: B:270-303        ---------------TPR_REGION  PDB: B:319-386 UniProt: 319-386                         ----------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------TPR  PDB: B:270-303               ---------------TPR  PDB: B:319-352               TPR  PDB: B:353-386               ----------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: B:145-172    ---------------------------------------------------Exon 1.6  PDB: B:224-254       Exon 1.7  PDB: B:255-282    Exon 1.8  PDB: B:283-344 UniProt: 283-344                     Exon 1.9  PDB: B:345-424 UniProt: 345-424                                       1.1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------Exon 1.5  PDB: B:172-224 UniProt: 172-224            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1p5q B 145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRmEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEmNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
                                   154       164       174       184       194       204      |214       224       234       244       254      |264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
                                                                                            211-MSE                                           261-MSE                                                                                                                                                                  

Chain C from PDB  Type:PROTEIN  Length:283
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:283
                                   154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
          FKBP4_HUMAN   145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
               SCOP domains d1p5qc2 C:145-257 FKBP52, N-terminal domains                                                                     d1p5qc1 C:258-427 FKBP52 (FKBP4), C-terminal domain                                                                                                                        SCOP domains
               CATH domains 1p5qC01 C:145-260  [code=3.10.50.40, no name defined]                                                               -1p5qC02 C:262-427  [code=1.25.40.10, no name defined]                                                                                                                  CATH domains
           Pfam domains (1) ---------------FKBP_C-1p5qC10 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1p5qC01 C:353-386           ----------------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------FKBP_C-1p5qC11 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1p5qC02 C:353-386           ----------------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------FKBP_C-1p5qC12 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1p5qC03 C:353-386           ----------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC04 C:353-386           ----------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC05 C:353-386           ----------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC06 C:353-386           ----------------------------------------- Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC07 C:353-386           ----------------------------------------- Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC08 C:353-386           ----------------------------------------- Pfam domains (8)
           Pfam domains (9) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1p5qC09 C:353-386           ----------------------------------------- Pfam domains (9)
         Sec.struct. author .....eeeeeee............eeeeeeeeee..eeeeeeeeeee..hhhhhh.hhhhhhhhh.....eeeeeee.hhhh.....hhhhh......eee..eeee..........hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------FKBP_PPIASE  PDB: C:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: C:270-303        ---------------TPR_REGION  PDB: C:319-386 UniProt: 319-386                         ----------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------TPR  PDB: C:270-303               ---------------TPR  PDB: C:319-352               TPR  PDB: C:353-386               ----------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: C:145-172    ---------------------------------------------------Exon 1.6  PDB: C:224-254       Exon 1.7  PDB: C:255-282    Exon 1.8  PDB: C:283-344 UniProt: 283-344                     Exon 1.9  PDB: C:345-424 UniProt: 345-424                                       1.1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------Exon 1.5  PDB: C:172-224 UniProt: 172-224            ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1p5q C 145 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRmEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEmNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKA 427
                                   154       164       174       184       194       204      |214       224       234       244       254      |264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424   
                                                                                            211-MSE                                           261-MSE                                                                                                                                                                  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric Unit

(-) CATH Domains  (2, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Clan: TPR (230)
(-)
Family: TPR_1 (18)
1aTPR_1-1p5qC01C:353-386
1bTPR_1-1p5qC02C:353-386
1cTPR_1-1p5qC03C:353-386
1dTPR_1-1p5qC04C:353-386
1eTPR_1-1p5qC05C:353-386
1fTPR_1-1p5qC06C:353-386
1gTPR_1-1p5qC07C:353-386
1hTPR_1-1p5qC08C:353-386
1iTPR_1-1p5qC09C:353-386
(-)
Family: FKBP_C (58)
2aFKBP_C-1p5qC10C:160-250
2bFKBP_C-1p5qC11C:160-250
2cFKBP_C-1p5qC12C:160-250

(-) Gene Ontology  (43, 43)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (FKBP4_HUMAN | Q02790)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0005528    FK506 binding    Interacting selectively and non-covalently with the 23-membered macrolide lactone FK506.
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0032767    copper-dependent protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of copper.
    GO:0035259    glucocorticoid receptor binding    Interacting selectively and non-covalently with a glucocorticoid receptor.
    GO:0031072    heat shock protein binding    Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
    GO:0051219    phosphoprotein binding    Interacting selectively and non-covalently with a phosphorylated protein.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0030674    protein binding, bridging    The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
    GO:0048156    tau protein binding    Interacting selectively and non-covalently with tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.
biological process
    GO:0030521    androgen receptor signaling pathway    Any series of molecular signals generated as a consequence of an androgen binding to its receptor.
    GO:0061077    chaperone-mediated protein folding    The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
    GO:0006825    copper ion transport    The directed movement of copper (Cu) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007566    embryo implantation    Attachment of the blastocyst to the uterine lining.
    GO:0046661    male sex differentiation    The establishment of the sex of a male organism by physical differentiation.
    GO:0031115    negative regulation of microtubule polymerization    Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
    GO:0031111    negative regulation of microtubule polymerization or depolymerization    Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization.
    GO:0010977    negative regulation of neuron projection development    Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:0030850    prostate gland development    The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.
    GO:0031503    protein complex localization    A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.
    GO:1900034    regulation of cellular response to heat    Any process that modulates the frequency, rate or extent of cellular response to heat.
    GO:0048608    reproductive structure development    The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures.
    GO:0006463    steroid hormone receptor complex assembly    The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.
cellular component
    GO:0030424    axon    The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
    GO:0044295    axonal growth cone    The migrating motile tip of a growing nerve cell axon.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005874    microtubule    Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        FKBP4_HUMAN | Q027901n1a 1q1c 1qz2 4drj 4lav 4law 4lax 4lay 4tw8

(-) Related Entries Specified in the PDB File

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