1OYJ - JenaLib

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Asymmetric Unit (Jmol Viewer)

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Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE SOLUTION OF RICE GST1 (OSGSTU1) IN COMPLEX WITH GLUTATHIONE.

Authors :   D. P. Dixon, A. G. Mcewen, A. J. Lapthorn, R. Edwards

Date :   04 Apr 03 (Deposition) - 01 Jul 03 (Release) - 25 Apr 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.95

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Herbicide Detoxification, Plant Glutathione S-Transferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. P. Dixon, A. G. Mcewen, A. J. Lapthorn, R. Edwards
Forced Evolution Of A Herbicide Detoxifying Glutathione Transferase.
J. Biol. Chem. V. 278 23930 2003
PubMed-ID: 12692133 | Reference-DOI: 10.1074/JBC.M303620200

Molecule 1 - GLUTATHIONE S-TRANSFERASE
	Chains	:	A, B, C, D
	EC Number	:	2.5.1.18
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET11
	Expression System Strain	:	BL21 (DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Common	:	RICE
	Organism Scientific	:	ORYZA SATIVA
	Organism Taxid	:	4530

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 39)

No.	Name	Count	Type	Full Name
1	CL	20	Ligand/Ion	CHLORIDE ION
2	GOL	9	Ligand/Ion	GLYCEROL
3	GSH	7	Ligand/Ion	GLUTATHIONE
4	MG	3	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (2, 6)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	3	Ligand/Ion	GLYCEROL
3	GSH	3	Ligand/Ion	GLUTATHIONE
4	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (2, 10)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	6	Ligand/Ion	GLYCEROL
3	GSH	4	Ligand/Ion	GLUTATHIONE
4	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (39, 39)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GSH A:800 , ASP D:205 , HOH D:838 , HOH D:842 , HOH D:853 , HOH D:854	BINDING SITE FOR RESIDUE MG A 815
02	AC2	SOFTWARE	ASP B:205 , GSH C:803 , HOH C:843 , HOH C:867 , HOH C:888 , HOH C:963	BINDING SITE FOR RESIDUE MG C 816
03	AC3	SOFTWARE	HOH A:904 , HOH A:915 , HOH A:927 , HOH A:950 , HOH A:968 , HOH A:969	BINDING SITE FOR RESIDUE MG A 817
04	AC4	SOFTWARE	LYS A:114 , GSH A:800	BINDING SITE FOR RESIDUE CL D 819
05	AC5	SOFTWARE	LYS B:42 , ARG B:54	BINDING SITE FOR RESIDUE CL B 820
06	AC6	SOFTWARE	ARG A:135 , SER D:213 , LYS D:216	BINDING SITE FOR RESIDUE CL D 821
07	AC7	SOFTWARE	GLU C:3 , PHE C:80 , PRO C:81 , GLY C:82	BINDING SITE FOR RESIDUE CL C 822
08	AC8	SOFTWARE	PHE A:80 , GLY A:82	BINDING SITE FOR RESIDUE CL A 823
09	AC9	SOFTWARE	LYS C:114 , GSH C:803	BINDING SITE FOR RESIDUE CL C 824
10	BC1	SOFTWARE	ASP A:44 , LEU A:45	BINDING SITE FOR RESIDUE CL A 825
11	BC2	SOFTWARE	LEU A:125 , LYS A:126	BINDING SITE FOR RESIDUE CL A 826
12	BC3	SOFTWARE	GLU A:152 , PHE A:153	BINDING SITE FOR RESIDUE CL A 827
13	BC4	SOFTWARE	ASP C:205	BINDING SITE FOR RESIDUE CL C 828
14	BC5	SOFTWARE	ARG C:113 , LYS D:55 , GSH D:805	BINDING SITE FOR RESIDUE CL C 829
15	BC6	SOFTWARE	VAL C:66 , SER C:67 , GOL C:813 , ALA D:102 , PHE D:106 , HOH D:967	BINDING SITE FOR RESIDUE CL C 830
16	BC7	SOFTWARE	GLU B:152 , PHE B:153 , GLY B:155 , GLY B:156 , GLY B:157	BINDING SITE FOR RESIDUE CL B 831
17	BC8	SOFTWARE	GLU D:152 , PHE D:153 , GLY D:157 , GLY D:158	BINDING SITE FOR RESIDUE CL D 832
18	BC9	SOFTWARE	SER B:213 , LYS B:216 , ARG C:135	BINDING SITE FOR RESIDUE CL C 833
19	CC1	SOFTWARE	ARG B:54 , ILE D:204 , ASP D:205	BINDING SITE FOR RESIDUE CL D 834
20	CC2	SOFTWARE	HOH A:953	BINDING SITE FOR RESIDUE CL B 835
21	CC3	SOFTWARE	PHE A:185 , SER A:186 , GLU A:189	BINDING SITE FOR RESIDUE CL A 836
22	CC4	SOFTWARE	TRP A:13	BINDING SITE FOR RESIDUE CL A 837
23	CC5	SOFTWARE	ARG D:203	BINDING SITE FOR RESIDUE CL A 838
24	CC6	SOFTWARE	SER A:15 , PHE A:17 , LYS A:42 , LYS A:55 , ILE A:56 , PRO A:57 , GLU A:68 , SER A:69 , HOH A:843 , HOH A:844 , HOH A:884 , HOH A:923 , ARG B:113 , HOH B:845	BINDING SITE FOR RESIDUE GSH A 799
25	CC7	SOFTWARE	LYS A:114 , CYS A:118 , ARG A:121 , GLU A:136 , MG A:815 , HOH A:849 , HOH A:850 , ASP D:205 , CL D:819 , HOH D:838 , HOH D:842 , HOH D:853	BINDING SITE FOR RESIDUE GSH A 800
26	CC8	SOFTWARE	ARG A:113 , SER B:15 , PHE B:17 , LYS B:42 , LYS B:55 , ILE B:56 , PRO B:57 , GLU B:68 , SER B:69 , HOH B:839 , HOH B:848 , HOH B:868 , HOH B:871 , HOH B:892	BINDING SITE FOR RESIDUE GSH B 801
27	CC9	SOFTWARE	SER C:15 , PHE C:17 , LYS C:42 , LYS C:55 , ILE C:56 , PRO C:57 , GLU C:68 , SER C:69 , HOH C:857 , HOH C:863 , HOH C:877 , HOH C:894 , HOH C:965 , HOH C:966 , ARG D:113	BINDING SITE FOR RESIDUE GSH C 802
28	DC1	SOFTWARE	ASP B:205 , ARG C:113 , LYS C:114 , CYS C:118 , ARG C:121 , GLU C:136 , MG C:816 , CL C:824 , HOH C:839 , HOH C:843 , HOH C:864 , HOH C:901 , HOH C:963 , HOH C:1011	BINDING SITE FOR RESIDUE GSH C 803
29	DC2	SOFTWARE	GLN C:130 , ARG C:181 , CYS C:182 , GLY C:183 , GLY C:184 , TYR C:218	BINDING SITE FOR RESIDUE GSH C 804
30	DC3	SOFTWARE	ARG C:113 , CL C:829 , SER D:15 , PHE D:17 , LYS D:42 , LYS D:55 , ILE D:56 , PRO D:57 , GLU D:68 , SER D:69 , HOH D:850 , HOH D:900 , HOH D:930	BINDING SITE FOR RESIDUE GSH D 805
31	DC4	SOFTWARE	THR A:103 , PHE A:106 , HOH A:949 , SER B:49 , PRO B:65 , SER B:67 , HOH B:886	BINDING SITE FOR RESIDUE GOL B 806
32	DC5	SOFTWARE	GLU D:31 , PHE D:32 , LYS D:209 , HIS D:210 , HOH D:852 , HOH D:858	BINDING SITE FOR RESIDUE GOL D 807
33	DC6	SOFTWARE	PHE B:32 , LYS B:209 , HIS B:210 , HOH C:845 , HOH C:890	BINDING SITE FOR RESIDUE GOL C 808
34	DC7	SOFTWARE	TRP C:107 , SER D:49 , ASN D:50 , PRO D:65 , SER D:67 , HOH D:835 , HOH D:921 , HOH D:963	BINDING SITE FOR RESIDUE GOL D 809
35	DC8	SOFTWARE	THR C:173 , ALA C:174 , GLY C:202 , PRO C:212 , SER C:213 , PRO C:214 , HOH C:912	BINDING SITE FOR RESIDUE GOL C 810
36	DC9	SOFTWARE	PHE A:176 , GLU A:180 , ALA A:195 , HOH A:907 , HOH A:970	BINDING SITE FOR RESIDUE GOL A 811
37	EC1	SOFTWARE	PHE A:32 , GLU A:33 , TYR A:34 , TRP C:13 , LYS C:216	BINDING SITE FOR RESIDUE GOL C 812
38	EC2	SOFTWARE	SER C:49 , PRO C:65 , SER C:67 , CL C:830 , HOH C:1041 , PHE D:106	BINDING SITE FOR RESIDUE GOL C 813
39	EC3	SOFTWARE	PRO A:65 , VAL A:66 , SER A:67 , HOH A:955 , TYR B:99 , THR B:103 , PHE B:106	BINDING SITE FOR RESIDUE GOL A 814

(no "SS Bond" information available for 1OYJ)

Asymmetric Unit

No.	Residues
1	Ile A:56	-	Pro A:57
2	Gly A:156	-	Gly A:157
3	Ile B:56	-	Pro B:57
4	Ile C:56	-	Pro C:57
5	Ile D:56	-	Pro D:57

(no "SAP(SNP)/Variant" information available for 1OYJ)

Asymmetric Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_NTER	PS50404	Soluble glutathione S-transferase N-terminal domain profile.	GSTU1_ORYSI	5-84	4	A:5-84 B:5-84 C:5-84 D:5-84
1	GST_NTER	PS50404		GSTU1_ORYSJ	5-84	4	A:5-84 B:5-84 C:5-84 D:5-84
2	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTU1_ORYSI	97-220	4	A:97-220 B:97-220 C:97-220 D:97-220
2	GST_CTER	PS50405		GSTU1_ORYSJ	97-220	4	A:97-220 B:97-220 C:97-220 D:97-220

Biological Unit 1 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_NTER	PS50404	Soluble glutathione S-transferase N-terminal domain profile.	GSTU1_ORYSI	5-84	2	A:5-84 B:5-84 - -
1	GST_NTER	PS50404		GSTU1_ORYSJ	5-84	2	A:5-84 B:5-84 - -
2	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTU1_ORYSI	97-220	2	A:97-220 B:97-220 - -
2	GST_CTER	PS50405		GSTU1_ORYSJ	97-220	2	A:97-220 B:97-220 - -

Biological Unit 2 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GST_NTER	PS50404	Soluble glutathione S-transferase N-terminal domain profile.	GSTU1_ORYSI	5-84	2	- - C:5-84 D:5-84
1	GST_NTER	PS50404		GSTU1_ORYSJ	5-84	2	- - C:5-84 D:5-84
2	GST_CTER	PS50405	Soluble glutathione S-transferase C-terminal domain profile.	GSTU1_ORYSI	97-220	2	- - C:97-220 D:97-220
2	GST_CTER	PS50405		GSTU1_ORYSJ	97-220	2	- - C:97-220 D:97-220

(no "Exon" information available for 1OYJ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:228
 aligned with GSTU1_ORYSI | A2XMN2 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:229
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221         
          GSTU1_ORYSI     2 AEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGV 230
               SCOP domains d1oyja2 A:2-85 Class tau GST                                                        d1oyja1  A:86-230 Class tau GST                                                                                                                   SCOP domains
               CATH domains 1oyjA01 A:2-93 Glutaredoxin                                                                 -1oyjA02 A:95-230  [code=1.20.1050.10, no name defined]                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh.............-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---GST_NTER  PDB: A:5-84 UniProt: 5-84                                             -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) -----------------------------------------------------------------------------------------------GST_CTER  PDB: A:97-220 UniProt: 97-220                                                                                     ---------- PROSITE (1)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj A   2 AEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSG-ADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV 230
                                    11        21        31        41        51        61        71        81        91 | |   101       111       121       131       141       151       161       171       181       191       201       211       221         
                                                                                                                      93 |                                                                                                                                       
                                                                                                                        95

Chain A from PDB  Type:PROTEIN  Length:228
 aligned with GSTU1_ORYSJ | Q10CE7 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:229
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221         
          GSTU1_ORYSJ     2 AEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV 230
               SCOP domains d1oyja2 A:2-85 Class tau GST                                                        d1oyja1  A:86-230 Class tau GST                                                                                                                   SCOP domains
               CATH domains 1oyjA01 A:2-93 Glutaredoxin                                                                 -1oyjA02 A:95-230  [code=1.20.1050.10, no name defined]                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh.............-.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---GST_NTER  PDB: A:5-84 UniProt: 5-84                                             -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------GST_CTER  PDB: A:97-220 UniProt: 97-220                                                                                     ---------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj A   2 AEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSG-ADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV 230
                                    11        21        31        41        51        61        71        81        91 | |   101       111       121       131       141       151       161       171       181       191       201       211       221         
                                                                                                                      93 |                                                                                                                                       
                                                                                                                        95

Chain B from PDB  Type:PROTEIN  Length:224
 aligned with GSTU1_ORYSI | A2XMN2 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:225
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222     
          GSTU1_ORYSI     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKK 227
               SCOP domains d1oyjb2 B:3-85 Class tau GST                                                       d1oyjb1  B:86-227 Class tau GST                                                                                                                SCOP domains
               CATH domains 1oyjB01 B:3-94 Glutaredoxin                                                                 1oyjB02 B:95-227  [code=1.20.1050.10, no name defined]                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh............-..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --GST_NTER  PDB: B:5-84 UniProt: 5-84                                             ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------GST_CTER  PDB: B:97-220 UniProt: 97-220                                                                                     ------- PROSITE (1)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj B   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANS-DADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
                                    12        22        32        42        52        62        72        82        92 |     102       112       122       132       142       152       162       172       182       192       202       212       222     
                                                                                                                    92 |                                                                                                                                     
                                                                                                                      94

Chain B from PDB  Type:PROTEIN  Length:224
 aligned with GSTU1_ORYSJ | Q10CE7 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:225
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222     
          GSTU1_ORYSJ     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
               SCOP domains d1oyjb2 B:3-85 Class tau GST                                                       d1oyjb1  B:86-227 Class tau GST                                                                                                                SCOP domains
               CATH domains 1oyjB01 B:3-94 Glutaredoxin                                                                 1oyjB02 B:95-227  [code=1.20.1050.10, no name defined]                                                                                CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh............-..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --GST_NTER  PDB: B:5-84 UniProt: 5-84                                             ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------GST_CTER  PDB: B:97-220 UniProt: 97-220                                                                                     ------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj B   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANS-DADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
                                    12        22        32        42        52        62        72        82        92 |     102       112       122       132       142       152       162       172       182       192       202       212       222     
                                                                                                                    92 |                                                                                                                                     
                                                                                                                      94

Chain C from PDB  Type:PROTEIN  Length:227
 aligned with GSTU1_ORYSI | A2XMN2 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:227
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       
          GSTU1_ORYSI     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYG 229
               SCOP domains d1oyjc2 C:3-85 Class tau GST                                                       d1oyjc1 C:86-229 Class tau GST                                                                                                                   SCOP domains
               CATH domains 1oyjC01 C:3-94 Glutaredoxin                                                                 1oyjC02 C:95-229  [code=1.20.1050.10, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhh....eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --GST_NTER  PDB: C:5-84 UniProt: 5-84                                             ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------GST_CTER  PDB: C:97-220 UniProt: 97-220                                                                                     --------- PROSITE (1)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj C   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYG 229
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222

Chain C from PDB  Type:PROTEIN  Length:227
 aligned with GSTU1_ORYSJ | Q10CE7 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:227
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       
          GSTU1_ORYSJ     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYG 229
               SCOP domains d1oyjc2 C:3-85 Class tau GST                                                       d1oyjc1 C:86-229 Class tau GST                                                                                                                   SCOP domains
               CATH domains 1oyjC01 C:3-94 Glutaredoxin                                                                 1oyjC02 C:95-229  [code=1.20.1050.10, no name defined]                                                                                  CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhh....eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --GST_NTER  PDB: C:5-84 UniProt: 5-84                                             ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------GST_CTER  PDB: C:97-220 UniProt: 97-220                                                                                     --------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj C   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYG 229
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222

Chain D from PDB  Type:PROTEIN  Length:223
 aligned with GSTU1_ORYSI | A2XMN2 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:225
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222     
          GSTU1_ORYSI     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKK 227
               SCOP domains d1oyjd2 D:3-85 Class tau GST                                                       d1oyjd1   D:86-227 Class tau GST                                                                                                               SCOP domains
               CATH domains 1oyjD01 D:3-92 Glutaredoxin                                                               --1oyjD02 D:95-227  [code=1.20.1050.10, no name defined]                                                                                CATH domains
           Pfam domains (1) ------GST_N_3-1oyjD05 D:9-84                                                      -----------GST_C_2-1oyjD01 D:96-200                                                                                 --------------------------- Pfam domains (1)
           Pfam domains (2) ------GST_N_3-1oyjD06 D:9-84                                                      -----------GST_C_2-1oyjD02 D:96-200                                                                                 --------------------------- Pfam domains (2)
           Pfam domains (3) ------GST_N_3-1oyjD07 D:9-84                                                      -----------GST_C_2-1oyjD03 D:96-200                                                                                 --------------------------- Pfam domains (3)
           Pfam domains (4) ------GST_N_3-1oyjD08 D:9-84                                                      -----------GST_C_2-1oyjD04 D:96-200                                                                                 --------------------------- Pfam domains (4)
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh............--.hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --GST_NTER  PDB: D:5-84 UniProt: 5-84                                             ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (1) ----------------------------------------------------------------------------------------------GST_CTER  PDB: D:97-220 UniProt: 97-220                                                                                     ------- PROSITE (1)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj D   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANS--ADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
                                    12        22        32        42        52        62        72        82        92  |    102       112       122       132       142       152       162       172       182       192       202       212       222     
                                                                                                                    92 95

Chain D from PDB  Type:PROTEIN  Length:223
 aligned with GSTU1_ORYSJ | Q10CE7 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:225
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222     
          GSTU1_ORYSJ     3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
               SCOP domains d1oyjd2 D:3-85 Class tau GST                                                       d1oyjd1   D:86-227 Class tau GST                                                                                                               SCOP domains
               CATH domains 1oyjD01 D:3-92 Glutaredoxin                                                               --1oyjD02 D:95-227  [code=1.20.1050.10, no name defined]                                                                                CATH domains
           Pfam domains (1) ------GST_N_3-1oyjD05 D:9-84                                                      -----------GST_C_2-1oyjD01 D:96-200                                                                                 --------------------------- Pfam domains (1)
           Pfam domains (2) ------GST_N_3-1oyjD06 D:9-84                                                      -----------GST_C_2-1oyjD02 D:96-200                                                                                 --------------------------- Pfam domains (2)
           Pfam domains (3) ------GST_N_3-1oyjD07 D:9-84                                                      -----------GST_C_2-1oyjD03 D:96-200                                                                                 --------------------------- Pfam domains (3)
           Pfam domains (4) ------GST_N_3-1oyjD08 D:9-84                                                      -----------GST_C_2-1oyjD04 D:96-200                                                                                 --------------------------- Pfam domains (4)
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhhh...eeee......hhhhhhhh.......eeee..eeeehhhhhhhhhhhhh............--.hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --GST_NTER  PDB: D:5-84 UniProt: 5-84                                             ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------GST_CTER  PDB: D:97-220 UniProt: 97-220                                                                                     ------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1oyj D   3 EEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANS--ADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKK 227
                                    12        22        32        42        52        62        72        82        92  |    102       112       122       132       142       152       162       172       182       192       202       212       222     
                                                                                                                    92 95

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: GST C-terminal domain-like (353)

Superfamily: GST C-terminal domain-like (353)

Family: Glutathione S-transferase (GST), C-terminal domain (263)

Protein domain: Class tau GST (2)

Rice (Oryza sativa) [TaxId: 4530] (1)

1a	d1oyja1	A:86-230
1b	d1oyjb1	B:86-227
1c	d1oyjc1	C:86-229
1d	d1oyjd1	D:86-227

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thioredoxin fold (994)

Superfamily: Thioredoxin-like (992)

Family: Glutathione S-transferase (GST), N-terminal domain (216)

Protein domain: Class tau GST (2)

Rice (Oryza sativa) [TaxId: 4530] (1)

2a	d1oyja2	A:2-85
2b	d1oyjb2	B:3-85
2c	d1oyjc2	C:3-85
2d	d1oyjd2	D:3-85

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Rice (Oryza sativa) (2)

1a	1oyjA01	A:2-93
1b	1oyjC01	C:3-94
1c	1oyjB01	B:3-94
1d	1oyjD01	D:3-92

Class: Mainly Alpha (13335)

Architecture: Up-down Bundle (3216)

Topology: Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 (267)

Homologous Superfamily: [code=1.20.1050.10, no name defined] (249)

Rice (Oryza sativa) (1)

2a	1oyjB02	B:95-227
2b	1oyjD02	D:95-227
2c	1oyjC02	C:95-229
2d	1oyjA02	A:95-230

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: GST_C (118)

Family: GST_C_2 (16)

Oryza sativa subsp. japonica (Rice) (1)

1a	GST_C_2-1oyjD01	D:96-200
1b	GST_C_2-1oyjD02	D:96-200
1c	GST_C_2-1oyjD03	D:96-200
1d	GST_C_2-1oyjD04	D:96-200

Clan: Thioredoxin (367)

Family: GST_N_3 (20)

Oryza sativa subsp. japonica (Rice) (1)

2a	GST_N_3-1oyjD05	D:9-84
2b	GST_N_3-1oyjD06	D:9-84
2c	GST_N_3-1oyjD07	D:9-84
2d	GST_N_3-1oyjD08	D:9-84

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (GSTU1_ORYSJ | Q10CE7)

molecular function
	GO:0004364	glutathione transferase activity	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0006749	glutathione metabolic process	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.
	GO:0009407	toxin catabolic process	The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D (GSTU1_ORYSI | A2XMN2)

molecular function
	GO:0004364		glutathione transferase activity		Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
	GO:0016740		transferase activity		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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	1oyj
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Description

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Ligands, Modified Residues, Ions (4, 39)

Sites (39, 39)

SS Bonds (0, 0)

Cis Peptide Bonds (5, 5)

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