1O4Z - JenaLib

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Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THE THREE-DIMENSIONAL STRUCTURE OF BETA-AGARASE B FROM ZOBELLIA GALACTANIVORANS

Authors :   J. Allouch, M. Jam, W. Helbert, T. Barbeyron, B. Kloareg, B. Henrissat, M. Czjzek

Date :   29 Jul 03 (Deposition) - 09 Dec 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Beta-Agarase, Glycoside Hydrolase Family 16, Agarose Degradation, Cleavage Of Beta-1, 4-D-Galactose Linkages (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Allouch, M. Jam, W. Helbert, T. Barbeyron, B. Kloareg, B. Henrissat, M. Czjzek
The Three-Dimensional Structures Of Two {Beta}-Agarases.
J. Biol. Chem. V. 278 47171 2003
PubMed-ID: 12970344 | Reference-DOI: 10.1074/JBC.M308313200
(for further references see the PDB file header)

Molecule 1 - BETA-AGARASE B
	Chains	:	A, B, C, D
	EC Number	:	3.2.1.81
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET20B
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	AGAB
	Organism Scientific	:	ZOBELLIA GALACTANIVORANS
	Organism Taxid	:	63186
	Strain	:	DSIJ

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 13)

No.	Name	Count	Type	Full Name
1	EPE	4	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2	MG	2	Ligand/Ion	MAGNESIUM ION
3	NA	7	Ligand/Ion	SODIUM ION

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	EPE	2	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	NA	-1	Ligand/Ion	SODIUM ION

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	EPE	2	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2	MG	-1	Ligand/Ion	MAGNESIUM ION
3	NA	-1	Ligand/Ion	SODIUM ION

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	VAL B:239	BINDING SITE FOR RESIDUE MG B 1001
02	AC2	SOFTWARE	GLU C:197 , SER C:198	BINDING SITE FOR RESIDUE MG C 1002
03	AC3	SOFTWARE	ASN D:83 , GLU D:85 , GLY D:127 , ASP D:343	BINDING SITE FOR RESIDUE NA D 1003
04	AC4	SOFTWARE	ASN A:83 , GLU A:85 , GLY A:127 , ASP A:343 , HOH A:2119	BINDING SITE FOR RESIDUE NA A 1004
05	AC5	SOFTWARE	ASN B:83 , GLU B:85 , GLY B:127 , ASP B:343	BINDING SITE FOR RESIDUE NA B 1005
06	AC6	SOFTWARE	ASN C:83 , GLY C:127 , ASP C:343 , HOH C:2198	BINDING SITE FOR RESIDUE NA C 1006
07	AC7	SOFTWARE	ARG A:246	BINDING SITE FOR RESIDUE NA A 1007
08	AC8	SOFTWARE	GLU B:128 , HOH B:2232	BINDING SITE FOR RESIDUE NA B 1008
09	AC9	SOFTWARE	LYS C:118 , ARG C:119	BINDING SITE FOR RESIDUE NA C 1009
10	BC1	SOFTWARE	PRO C:112 , ASP C:173 , TRP C:175 , GLU C:184 , ASP C:186 , GLU C:189 , GLU C:308 , GLN C:310 , THR C:311 , TRP C:312	BINDING SITE FOR RESIDUE EPE C 2001
11	BC2	SOFTWARE	PRO A:112 , ASP A:173 , TRP A:175 , GLU A:184 , ASP A:186 , GLU A:189 , GLU A:308 , GLN A:310 , THR A:311	BINDING SITE FOR RESIDUE EPE A 2002
12	BC3	SOFTWARE	TRP D:175 , GLU D:184 , ASP D:186 , GLU D:189 , GLU D:308 , GLN D:310	BINDING SITE FOR RESIDUE EPE D 2003
13	BC4	SOFTWARE	PRO B:112 , TRP B:175 , GLU B:184 , ASP B:186 , GLU B:189 , GLU B:308 , GLN B:310 , THR B:311 , HOH B:2084	BINDING SITE FOR RESIDUE EPE B 2004

(no "SS Bond" information available for 1O4Z)

Asymmetric Unit

No.	Residues
1	Tyr A:155	-	Pro A:156
2	Tyr B:155	-	Pro B:156
3	Asp B:220	-	Pro B:221
4	Tyr C:155	-	Pro C:156
5	Asp C:220	-	Pro C:221
6	Tyr D:155	-	Pro D:156
7	Asp D:220	-	Pro D:221

(no "SAP(SNP)/Variant" information available for 1O4Z)

Asymmetric Unit (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GH16_2	PS51762	Glycosyl hydrolases family 16 (GH16) domain profile.	AGAB_ZOBGA	58-353	3	B:58-353 C:58-353 D:58-353

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GH16_2	PS51762	Glycosyl hydrolases family 16 (GH16) domain profile.	AGAB_ZOBGA	58-353	1	B:58-353 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GH16_2	PS51762	Glycosyl hydrolases family 16 (GH16) domain profile.	AGAB_ZOBGA	58-353	2	- C:58-353 D:58-353

(no "Exon" information available for 1O4Z)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:295
 aligned with AGAB_ZOBGA | Q9RGX8 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:295
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348     
           AGAB_ZOBGA    59 DWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353
               SCOP domains d1o4za_ A: beta-Agarase A                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 1o4zA00 A:59-353  [code=2.60.120.200, no name defined]                                                                                                                                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.........eeeee................hhhhhhhee............eee....eeee..eeeee.ee......eee.eeee.......eeeeeeee......eeeeeeee....eeeeeeee....ee....eehhhhhh.eeeeeeeee....eee...hhh.ee....hhhhh.eeeeeeeee..eeeeee..eeeeeeehhhhhh........................eeeeeeee.hhhhhh....hhhhh...hhhhhh.hhh.eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GH16_2  PDB: - UniProt: 58-353                                                                                                                                                                                                                                                                          PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o4z A  59 DWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348

Chain B from PDB  Type:PROTEIN  Length:297
 aligned with AGAB_ZOBGA | Q9RGX8 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:297
                                                                                                                                                                                                                                                                                                                                 353 
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347     | 
           AGAB_ZOBGA    58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK-   -
               SCOP domains d1o4zb_ B: beta-Agarase A                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1o4zB00 B:58-354  [code=2.60.120.200, no name defined]                                                                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee................hhhhhhhee............eee....eeee..eeeee.ee......eee.eeee.......eeeeeeee......eeeeeeee....eeeeeeeee...ee....eehhhhhh.eeeeeeeee....eee...hhh.ee....hhhhh.eeeeeeeee..eeeeee..eeeeeeehhhhhh........................eeeeeeee.hhhhhh....hhhhh...hhhhhh.hhh.eeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GH16_2  PDB: B:58-353 UniProt: 58-353                                                                                                                                                                                                                                                                   - PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o4z B  58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEKL 354
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347

Chain C from PDB  Type:PROTEIN  Length:296
 aligned with AGAB_ZOBGA | Q9RGX8 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:296
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347      
           AGAB_ZOBGA    58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353
               SCOP domains d1o4zc_ C: beta-Agarase A                                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1o4zC00 C:58-353  [code=2.60.120.200, no name defined]                                                                                                                                                                                                                                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee................hhhhhhhee............eee....eeee..eeeee.ee......eee.eeee.......eeeeeeee......eeeeeeee....eeeeeeee....ee....eehhhhhh.eeeeeeeee....eee...hhh.ee....hhhhh.eeeeeeeee..eeeeee..eeeeeeehhhhhh........................eeeeeeee.hhhhhh....hhhhh...hhhhhh.hhh.eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GH16_2  PDB: C:58-353 UniProt: 58-353                                                                                                                                                                                                                                                                    PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o4z C  58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347

Chain D from PDB  Type:PROTEIN  Length:297
 aligned with AGAB_ZOBGA | Q9RGX8 from UniProtKB/Swiss-Prot  Length:353

    Alignment length:297
                                                                                                                                                                                                                                                                                                                                 353 
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347     | 
           AGAB_ZOBGA    58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK-   -
               SCOP domains d1o4zd_ D: beta-Agarase A                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1o4zD00 D:58-354  [code=2.60.120.200, no name defined]                                                                                                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee................hhhhhhhee............eee....eeee..eeeee.ee......eee.eeee.......eeeeeeee......eeeeeeee....eeeeeeeee...ee....eehhhhhh.eeeeeeeee....eee...hhh.ee....hhhhh.eeeeeeeee..eeeeee..eeeeeeehhhhhh........................eeeeeeee.hhhhhh....hhhhh...hhhhhhhhhh.eeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GH16_2  PDB: D:58-353 UniProt: 58-353                                                                                                                                                                                                                                                                   - PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o4z D  58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEKL 354
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Concanavalin A-like lectins/glucanases (797)

Superfamily: Concanavalin A-like lectins/glucanases (797)

Family: Glycosyl hydrolases family 16 (29)

Protein domain: beta-Agarase A (3)

Zobellia galactanivorans [TaxId: 63186] (3)

1a	d1o4za_	A:
1b	d1o4zb_	B:
1c	d1o4zc_	C:
1d	d1o4zd_	D:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Jelly Rolls (1293)

Homologous Superfamily: [code=2.60.120.200, no name defined] (421)

Zobellia galactanivorans. Organism_taxid: 63186. Strain: dsij. (1)

1a	1o4zA00	A:59-353
1b	1o4zC00	C:58-353
1c	1o4zB00	B:58-354
1d	1o4zD00	D:58-354

(no "Pfam Domain" information available for 1O4Z)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (AGAB_ZOBGA | Q9RGX8)

molecular function
	GO:0033916	beta-agarase activity	Catalysis of the hydrolysis of (1->4)-beta-D-galactosidic linkages in agarose, giving the tetramer as the predominant product.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Catalysis of the hydrolysis of any O-glycosyl bond.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0009279	cell outer membrane	A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Asp B:220 - Pro B:221	[ RasMol ]
		Asp C:220 - Pro C:221	[ RasMol ]
		Asp D:220 - Pro D:221	[ RasMol ]
		Tyr A:155 - Pro A:156	[ RasMol ]
		Tyr B:155 - Pro B:156	[ RasMol ]
		Tyr C:155 - Pro C:156	[ RasMol ]
		Tyr D:155 - Pro D:156	[ RasMol ]

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Access by PDB/NDB ID
	1o4z
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	AGAB_ZOBGA \| Q9RGX8
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	AGAB_ZOBGA \| Q9RGX8
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	AGAB_ZOBGA \| Q9RGX8	:	4atf

(no "Related Entries Specified in the PDB File" available for 1O4Z)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 13)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (7, 7)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 3)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (1, 4)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File