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(-) Description

Title :  CRYSTAL STRUCTURE OF MNMN CONCANAVALIN A
 
Authors :  F. J. Lopez-Jaramillo, L. A. Gonzalez-Ramirez, A. Albert, F. Santoyo- A. Vargas-Berenguel, F. Otalora
Date :  10 Feb 03  (Deposition) - 30 Mar 04  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  1,2,3,4
Biol. Unit 1:  1  (1x)
Biol. Unit 2:  2  (1x)
Biol. Unit 3:  3  (1x)
Biol. Unit 4:  4  (1x)
Biol. Unit 5:  1,2  (2x)
Biol. Unit 6:  3 (2x),4 (2x)
Biol. Unit 7:  1,2  (1x)
Biol. Unit 8:  3 (1x),4 (1x)
Keywords :  Lectin, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. J. Lopez-Jaramillo, L. A. Gonzalez-Ramirez, A. Albert, F. Santoyo-Gonzalez, A. Vargas-Berenguel, F. Otalora
Structure Of Concanavalin A At Ph 8: Bound Solvent And Crystal Contacts.
Acta Crystallogr. , Sect. D V. 60 1048 2004
PubMed-ID: 15159564  |  Reference-DOI: 10.1107/S0907444904007000
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONCANAVALIN A
    Chains: 1, 2, 3, 4
    Organism Common: JACK BEAN
    Organism Scientific: CANAVALIA ENSIFORMIS
    Organism Taxid: 3823
    Synonym: CON A

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : 1234
Biological Unit 1 (1x): 1   
Biological Unit 2 (1x):  2  
Biological Unit 3 (1x):   3 
Biological Unit 4 (1x):    4
Biological Unit 5 (2x): 12  
Biological Unit 6 (2x):   3 (2x)4 (2x)
Biological Unit 7 (1x): 12  
Biological Unit 8 (1x):   3 (1x)4 (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 53)

Asymmetric Unit (4, 53)
No.NameCountTypeFull Name
1AZI16Ligand/IonAZIDE ION
2GOL25Ligand/IonGLYCEROL
3MN8Ligand/IonMANGANESE (II) ION
4NA4Ligand/IonSODIUM ION
Biological Unit 1 (2, 11)
No.NameCountTypeFull Name
1AZI3Ligand/IonAZIDE ION
2GOL8Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 2 (2, 11)
No.NameCountTypeFull Name
1AZI5Ligand/IonAZIDE ION
2GOL6Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 3 (2, 9)
No.NameCountTypeFull Name
1AZI4Ligand/IonAZIDE ION
2GOL5Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 4 (2, 10)
No.NameCountTypeFull Name
1AZI4Ligand/IonAZIDE ION
2GOL6Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 5 (2, 44)
No.NameCountTypeFull Name
1AZI16Ligand/IonAZIDE ION
2GOL28Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 6 (2, 18)
No.NameCountTypeFull Name
1AZI8Ligand/IonAZIDE ION
2GOL10Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 7 (2, 22)
No.NameCountTypeFull Name
1AZI8Ligand/IonAZIDE ION
2GOL14Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION
Biological Unit 8 (2, 9)
No.NameCountTypeFull Name
1AZI4Ligand/IonAZIDE ION
2GOL5Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4NA-1Ligand/IonSODIUM ION

(-) Sites  (53, 53)

Asymmetric Unit (53, 53)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER 3:110 , PHE 3:111 , THR 3:112 , HIS 3:127 , GLU 3:192 , HOH 3:1175BINDING SITE FOR RESIDUE AZI 3 901
02AC2SOFTWAREHIS 2:127 , HOH 2:1055BINDING SITE FOR RESIDUE AZI 2 902
03AC3SOFTWAREHOH 1:1133 , ASP 4:218 , SER 4:220BINDING SITE FOR RESIDUE AZI 4 903
04AC4SOFTWAREHIS 3:127 , HIS 4:127BINDING SITE FOR RESIDUE AZI 3 904
05AC5SOFTWARELYS 2:138 , LEU 2:140 , TYR 2:176BINDING SITE FOR RESIDUE AZI 2 905
06AC6SOFTWARELYS 4:138 , LEU 4:140 , TYR 4:176 , HOH 4:1164BINDING SITE FOR RESIDUE AZI 4 906
07AC7SOFTWARETHR 1:105 , GLU 1:155 , HOH 1:1093 , HOH 1:1184BINDING SITE FOR RESIDUE AZI 1 907
08AC8SOFTWAREGOL 1:804 , TYR 2:12 , PRO 2:13 , HIS 2:205 , HOH 2:1029 , HOH 2:1119BINDING SITE FOR RESIDUE AZI 2 908
09AC9SOFTWAREGLY 3:224 , SER 3:225 , THR 3:226BINDING SITE FOR RESIDUE AZI 3 909
10BC1SOFTWARESER 1:113 , LYS 1:114 , HIS 1:180 , ILE 1:181 , SER 1:190 , PHE 1:191 , GOL 1:812 , HOH 1:1110BINDING SITE FOR RESIDUE AZI 1 910
11BC2SOFTWARETHR 4:157 , ARG 4:158 , VAL 4:159 , HOH 4:1017BINDING SITE FOR RESIDUE AZI 4 911
12BC3SOFTWARESER 1:110 , PHE 1:111 , THR 1:112 , GLU 1:192 , ALA 1:193 , THR 1:194BINDING SITE FOR RESIDUE AZI 1 912
13BC4SOFTWARETRP 1:88 , ASN 1:124 , HIS 1:180 , GOL 1:812 , PHE 2:130 , GLN 2:137 , ASP 2:139 , HOH 2:1160BINDING SITE FOR RESIDUE AZI 2 913
14BC5SOFTWARETHR 3:105 , LEU 3:198BINDING SITE FOR RESIDUE AZI 3 914
15BC6SOFTWARETHR 2:103 , THR 2:105 , GLU 2:155 , LYS 2:200 , HOH 2:1168BINDING SITE FOR RESIDUE AZI 2 915
16BC7SOFTWAREHOH 3:1083 , TYR 4:12 , PRO 4:13 , GOL 4:810 , HOH 4:1081 , HOH 4:1105 , HOH 4:1135BINDING SITE FOR RESIDUE AZI 4 916
17BC8SOFTWAREASP 1:10 , TYR 1:12 , ASN 1:14 , ASP 1:19 , HOH 1:1062 , HOH 1:1063BINDING SITE FOR RESIDUE MN 1 1001
18BC9SOFTWAREGLU 1:8 , ASP 1:10 , ASP 1:19 , HIS 1:24 , HOH 1:1064 , HOH 1:1116BINDING SITE FOR RESIDUE MN 1 1002
19CC1SOFTWAREASP 2:10 , TYR 2:12 , ASN 2:14 , ASP 2:19 , HOH 2:1014 , HOH 2:1046BINDING SITE FOR RESIDUE MN 2 1003
20CC2SOFTWAREGLU 2:8 , ASP 2:10 , ASP 2:19 , HIS 2:24 , HOH 2:1035 , HOH 2:1092BINDING SITE FOR RESIDUE MN 2 1004
21CC3SOFTWAREASP 3:10 , TYR 3:12 , ASN 3:14 , ASP 3:19 , HOH 3:1028 , HOH 3:1030BINDING SITE FOR RESIDUE MN 3 1005
22CC4SOFTWAREGLU 3:8 , ASP 3:10 , ASP 3:19 , HIS 3:24 , HOH 3:1029 , HOH 3:1069BINDING SITE FOR RESIDUE MN 3 1006
23CC5SOFTWAREASP 4:10 , TYR 4:12 , ASN 4:14 , ASP 4:19 , HOH 4:1012 , HOH 4:1045BINDING SITE FOR RESIDUE MN 4 1007
24CC6SOFTWAREGLU 4:8 , ASP 4:10 , ASP 4:19 , HIS 4:24 , HOH 4:1044 , HOH 4:1108BINDING SITE FOR RESIDUE MN 4 1008
25CC7SOFTWARELEU 2:107 , ASN 2:131 , HOH 2:1096 , HOH 2:1135 , HOH 2:1167BINDING SITE FOR RESIDUE NA 2 1009
26CC8SOFTWAREGLU 3:122 , LEU 4:107 , ASN 4:131 , HOH 4:1078 , HOH 4:1109 , HOH 4:1141 , HOH 4:1199BINDING SITE FOR RESIDUE NA 4 1010
27CC9SOFTWARELEU 3:107 , ASN 3:131 , HOH 3:1085 , HOH 3:1101 , HOH 3:1105 , HOH 3:1106 , GLU 4:122BINDING SITE FOR RESIDUE NA 3 1011
28DC1SOFTWARELEU 1:107 , ASN 1:131 , HOH 1:1147 , HOH 1:1151 , GLU 2:122 , HOH 2:1116 , HOH 2:1131BINDING SITE FOR RESIDUE NA 1 1012
29DC2SOFTWAREPRO 4:234 , ASP 4:235 , ASN 4:237 , HOH 4:1073 , HOH 4:1093 , HOH 4:1144BINDING SITE FOR RESIDUE GOL 4 801
30DC3SOFTWARETRP 3:88 , SER 3:113 , LYS 3:114 , ALA 3:125 , LEU 3:126 , VAL 3:179 , HIS 3:180 , HOH 3:1021 , ASP 4:139 , HOH 4:1149BINDING SITE FOR RESIDUE GOL 3 802
31DC4SOFTWAREASN 3:14 , GLY 3:98 , LEU 3:99 , TYR 3:100 , ALA 3:207 , ASP 3:208 , ARG 3:228BINDING SITE FOR RESIDUE GOL 3 803
32DC5SOFTWAREASN 1:44 , SER 1:201 , ASP 1:203 , SER 1:204 , HOH 1:1097 , HOH 1:1145 , PRO 2:13 , ASN 2:14 , THR 2:15 , ASP 2:16 , GOL 2:815 , AZI 2:908 , HOH 2:1094BINDING SITE FOR RESIDUE GOL 1 804
33DC6SOFTWARETYR 4:12 , ASN 4:14 , GLY 4:98 , LEU 4:99 , TYR 4:100 , ALA 4:207 , ASP 4:208 , ARG 4:228 , HOH 4:1189 , HOH 4:1201BINDING SITE FOR RESIDUE GOL 4 805
34DC7SOFTWAREPRO 1:222 , SER 1:223 , PRO 1:234 , HOH 1:1032 , HOH 1:1081 , SER 4:168 , HOH 4:1095BINDING SITE FOR RESIDUE GOL 1 806
35DC8SOFTWAREASN 1:14 , GLY 1:98 , LEU 1:99 , TYR 1:100 , ALA 1:207 , ASP 1:208 , ARG 1:228 , HOH 1:1027BINDING SITE FOR RESIDUE GOL 1 807
36DC9SOFTWAREPRO 3:86 , TRP 3:88 , ASN 3:216 , ILE 3:217 , ASP 3:218 , HOH 3:1122BINDING SITE FOR RESIDUE GOL 3 808
37EC1SOFTWAREALA 2:38 , LYS 2:39 , SER 2:72 , ALA 2:73 , THR 2:74 , HOH 2:1144 , HOH 2:1192BINDING SITE FOR RESIDUE GOL 2 809
38EC2SOFTWAREASN 3:44 , SER 3:201 , ASP 3:203 , PRO 4:13 , ASN 4:14 , THR 4:15 , ASP 4:16 , AZI 4:916 , HOH 4:1081 , HOH 4:1088 , HOH 4:1103BINDING SITE FOR RESIDUE GOL 4 810
39EC3SOFTWARESER 2:113 , LEU 2:115 , LEU 2:126 , PRO 2:178 , VAL 2:179 , HIS 2:180 , HOH 2:1024 , HOH 2:1045BINDING SITE FOR RESIDUE GOL 2 811
40EC4SOFTWARESER 1:113 , ASN 1:124 , ALA 1:125 , VAL 1:179 , HIS 1:180 , AZI 1:910 , HOH 1:1059 , HOH 1:1225 , AZI 2:913BINDING SITE FOR RESIDUE GOL 1 812
41EC5SOFTWAREASP 3:139 , HOH 3:1147 , ALA 4:125 , LEU 4:126 , PRO 4:178 , VAL 4:179 , HIS 4:180 , HOH 4:1145BINDING SITE FOR RESIDUE GOL 4 813
42EC6SOFTWAREASN 2:14 , GLY 2:98 , LEU 2:99 , TYR 2:100 , ALA 2:207 , ASP 2:208 , ARG 2:228 , GOL 2:815 , HOH 2:1050BINDING SITE FOR RESIDUE GOL 2 814
43EC7SOFTWARETYR 1:100 , SER 1:204 , HIS 1:205 , GOL 1:804 , TYR 2:12 , LEU 2:99 , GOL 2:814BINDING SITE FOR RESIDUE GOL 2 815
44EC8SOFTWARETYR 3:54 , SER 3:56 , LYS 3:59 , ASP 3:82 , ILE 3:181 , TRP 3:182 , GLU 3:183 , ALA 3:189 , HOH 3:1152BINDING SITE FOR RESIDUE GOL 3 816
45EC9SOFTWAREVAL 1:170 , GLY 1:224 , HOH 1:1126 , HOH 1:1207 , GOL 4:819 , HOH 4:1030BINDING SITE FOR RESIDUE GOL 4 817
46FC1SOFTWAREGLN 2:143 , GLY 2:144 , SER 2:220 , ILE 2:221 , HOH 2:1012BINDING SITE FOR RESIDUE GOL 2 818
47FC2SOFTWAREGLN 4:143 , GLY 4:144 , SER 4:220 , ILE 4:221 , GOL 4:817 , HOH 4:1014 , HOH 4:1180BINDING SITE FOR RESIDUE GOL 4 819
48FC3SOFTWAREARG 2:228 , PRO 2:234 , ASP 2:235 , ALA 2:236 , HOH 2:1132BINDING SITE FOR RESIDUE GOL 2 820
49FC4SOFTWARETYR 1:12 , PRO 1:13 , ASN 1:14 , THR 1:15 , ASP 1:16 , HOH 1:1015 , LEU 2:99BINDING SITE FOR RESIDUE GOL 1 821
50FC5SOFTWAREGLN 1:143 , GLY 1:144 , SER 1:220 , ILE 1:221BINDING SITE FOR RESIDUE GOL 1 822
51FC6SOFTWARESER 1:72 , ALA 1:73 , THR 1:74BINDING SITE FOR RESIDUE GOL 1 823
52FC7SOFTWARELYS 1:138 , LEU 1:140 , ILE 1:141 , TYR 1:176 , HOH 1:1107 , HOH 1:1155 , HOH 1:1165 , HOH 1:1198BINDING SITE FOR RESIDUE GOL 1 824
53FC8SOFTWARELYS 3:138 , LEU 3:140 , ILE 3:141 , TYR 3:176 , HOH 3:1035 , HOH 3:1125BINDING SITE FOR RESIDUE GOL 3 825

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NXD)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Ala 1:207 -Asp 1:208
2Ala 2:207 -Asp 2:208
3Ala 3:207 -Asp 3:208
4Ala 4:207 -Asp 4:208

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NXD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1NXD)

(-) Exons   (0, 0)

(no "Exon" information available for 1NXD)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 1 from PDB  Type:PROTEIN  Length:237
 aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:238
                                                                                                                      1                                                                                                                                                   
                                     -         -         -         -         -         -         -         -         -|       10        20        30        40        50        60        70        80        90       100       110       120       130       140        
           CONA_CANEN     - ------------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
               SCOP domains d1nxd1_ 1: Concanavalin A                                                                                                                                                                                                                      SCOP domains
               CATH domains 1nxd100 1:1-237  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...hhhhh.....eeeeee......eeee.......eeeeeeeee....eeeeeee......eeeeee.hhhhh...eeeeeeeee........eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee..............eeeeee...ee.....eeeeeeeeeeeee..........eeeeeeee.........hhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nxd 1   1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
                                    10        20        30        40        50        60        70        80        90       100       109       119       129       139       149       159       169       179       189       199       209       219       229        
                                                                                                                                     108 |                                                                                                                                
                                                                                                                                       109                                                                                                                                


Chain 2 from PDB  Type:PROTEIN  Length:237
 aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:238
                                                                                                                      1                                                                                                                                                   
                                     -         -         -         -         -         -         -         -         -|       10        20        30        40        50        60        70        80        90       100       110       120       130       140        
           CONA_CANEN     - ------------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
               SCOP domains d1nxd2_ 2: Concanavalin A                                                                                                                                                                                                                      SCOP domains
               CATH domains 1nxd200 2:1-237  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...hhhhh.....eeeeee......eeee.......eeeeeeeee....eeeeeee......eeeeee.hhhhh...eeeeeeeee........eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee..............eeeeee...ee.....eeeeeeeeeeeee..........eeeeeeee.........hhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nxd 2   1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
                                    10        20        30        40        50        60        70        80        90       100       109       119       129       139       149       159       169       179       189       199       209       219       229        
                                                                                                                                     108 |                                                                                                                                
                                                                                                                                       109                                                                                                                                


Chain 3 from PDB  Type:PROTEIN  Length:237
 aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:238
                                                                                                                      1                                                                                                                                                   
                                     -         -         -         -         -         -         -         -         -|       10        20        30        40        50        60        70        80        90       100       110       120       130       140        
           CONA_CANEN     - ------------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
               SCOP domains d1nxd3_ 3: Concanavalin A                                                                                                                                                                                                                      SCOP domains
               CATH domains 1nxd300 3:1-237  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...hhhhh.....eeeeee......eeee.......eeeeeeeee....eeeeeee......eeeeee.hhhhh...eeeeeeeee........eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee..............eeeeee...ee.....eeeeeeeeeeeee..........eeeeeee..........hhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nxd 3   1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
                                    10        20        30        40        50        60        70        80        90       100       109       119       129       139       149       159       169       179       189       199       209       219       229        
                                                                                                                                     108 |                                                                                                                                
                                                                                                                                       109                                                                                                                                


Chain 4 from PDB  Type:PROTEIN  Length:237
 aligned with CONA_CANEN | P02866 from UniProtKB/Swiss-Prot  Length:290

    Alignment length:238
                                                                                                                      1                                                                                                                                                   
                                     -         -         -         -         -         -         -         -         -|       10        20        30        40        50        60        70        80        90       100       110       120       130       140        
           CONA_CANEN     - ------------------------------------------------------------------------------------------MAISKKSSLFLPIFTFITMFLMVVNKVSSSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 148
               SCOP domains d1nxd4_ 4: Concanavalin A                                                                                                                                                                                                                      SCOP domains
               CATH domains 1nxd400 4:1-237  [code=2.60.120.200, no name defined]                                                                                                                                                                                          CATH domains
           Pfam domains (1) ----------------------------------------------------------------------------------------------------------------------------Lectin_legB-1nxd401 4:124-237                                                                                      Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------------------------------------------------------------------------------Lectin_legB-1nxd402 4:124-237                                                                                      Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------------------------------------------------------------------------------Lectin_legB-1nxd403 4:124-237                                                                                      Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------Lectin_legB-1nxd404 4:124-237                                                                                      Pfam domains (4)
         Sec.struct. author ...eeeeeee...hhhhh.....eeeeee......eeee.......eeeeeeeee....eeeeeee......eeeeee.hhhhh...eeeeeeeeee.......eeee-eeeeeeeee.....eeeeeeee.........eeeee..ee.hhh.ee.............eeeeeee...ee.....eeeeeeeeeeeee..........eeeeeeee.........hhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nxd 4   1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILS-WSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237
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 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: Concanavalin (293)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain 1,2,3,4   (CONA_CANEN | P02866)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0005537    mannose binding    Interacting selectively and non-covalently with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

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  1nxd
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CONA_CANEN | P02866: 1apn 1bxh 1c57 1ces 1cjp 1cn1 1con 1cvn 1dq0 1dq1 1dq2 1dq4 1dq5 1dq6 1enq 1enr 1ens 1gic 1gkb 1hqw 1i3h 1jbc 1jn2 1joj 1jui 1jw6 1jyc 1jyi 1nls 1ona 1qgl 1qny 1scr 1scs 1tei 1val 1vam 1xqn 2cna 2ctv 2enr 2uu8 2yz4 3cna 3d4k 3enr 3nwk 4p9w 4p9x 4p9y 4pf5 5cna

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1NXD)