1NW2 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURE OF THE MUTANT R82E OF THIOREDOXIN FROM ALICYCLOBACILLUS ACIDOCALDARIUS

Authors :   S. Bartolucci, G. De Simone, S. Galdiero, R. Improta, V. Menchise, C. P E. Pedone, M. Saviano

Date :   05 Feb 03 (Deposition) - 05 Aug 03 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.90

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D  (1x)
Biol. Unit 2: E,F,G,H  (1x)
Biol. Unit 3: A,B,C,D,E,F,G,H  (1x)
Biol. Unit 4: A (1x),B (1x),C (1x),D (1x),E (1x),F (1x),G (1x),H (1x)
Biol. Unit 5: A (1x),B (1x),C (1x),D (1x),E (1x),F (1x),G (1x),H (1x)
Biol. Unit 6: A (1x),B (1x),C (1x),D (1x),E (1x),F (1x),G (1x),H (1x)

Keywords :   Thermostability, Thioredoxin, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Bartolucci, G. De Simone, S. Galdiero, R. Improta, V. Menchise, C. Pedone, E. Pedone, M. Saviano
An Integrated Structural And Computational Study Of The Thermostability Of Two Thioredoxin Mutants From Alicyclobacillus Acidocaldarius
J. Bacteriol. V. 185 4285 2003
PubMed-ID: 12837806 | Reference-DOI: 10.1128/JB.185.14.4285-4289.2003
(for further references see the PDB file header)

Molecule 1 - THIOREDOXIN
	Chains	:	A, B, C, D, E, F, G, H
	EC Number	:	1.8.1.9
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Mutation	:	YES
	Organism Scientific	:	ALICYCLOBACILLUS ACIDOCALDARIUS
	Organism Taxid	:	405212
	Synonym	:	TRX

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B	C	D
Biological Unit 2 (1x)	:					E	F	G	H
Biological Unit 3 (1x)	:	A	B	C	D	E	F	G	H
Biological Unit 4 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)	E (1x)	F (1x)	G (1x)	H (1x)
Biological Unit 5 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)	E (1x)	F (1x)	G (1x)	H (1x)
Biological Unit 6 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)	E (1x)	F (1x)	G (1x)	H (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 20)

No.	Name	Count	Type	Full Name
1	ACT	9	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	9	Ligand/Ion	ZINC ION

Biological Unit 1 (2, 7)

No.	Name	Count	Type	Full Name
1	ACT	5	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (1, 4)

No.	Name	Count	Type	Full Name
1	ACT	4	Ligand/Ion	ACETATE ION
2	CAC	-1	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 3 (2, 11)

No.	Name	Count	Type	Full Name
1	ACT	9	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 4 (2, 7)

No.	Name	Count	Type	Full Name
1	ACT	5	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 5 (2, 7)

No.	Name	Count	Type	Full Name
1	ACT	5	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 6 (2, 7)

No.	Name	Count	Type	Full Name
1	ACT	5	Ligand/Ion	ACETATE ION
2	CAC	2	Ligand/Ion	CACODYLATE ION
3	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS D:46 , GLU D:97 , CAC D:5002 , ZN D:6004 , ZN D:6009 , HOH D:6027 , GLU H:62 , HOH H:7025	BINDING SITE FOR RESIDUE CAC D 5001
02	AC2	SOFTWARE	HIS D:46 , GLU D:97 , CAC D:5001 , ZN D:6004 , ZN D:6009 , HOH D:6040 , HOH D:6092 , GLU H:62	BINDING SITE FOR RESIDUE CAC D 5002
03	AC3	SOFTWARE	HIS A:46 , GLU A:97 , ACT A:7001 , ACT A:7002	BINDING SITE FOR RESIDUE ZN A 6001
04	AC4	SOFTWARE	HIS B:46 , GLU B:97 , ACT B:7003 , GLU H:94	BINDING SITE FOR RESIDUE ZN B 6002
05	AC5	SOFTWARE	HIS C:46 , GLU C:97 , ACT C:7004 , HOH C:7019	BINDING SITE FOR RESIDUE ZN C 6003
06	AC6	SOFTWARE	HIS D:46 , GLU D:97 , CAC D:5001 , CAC D:5002	BINDING SITE FOR RESIDUE ZN D 6004
07	AC7	SOFTWARE	HIS E:46 , GLU E:97 , ACT E:7005 , HOH E:7052	BINDING SITE FOR RESIDUE ZN E 6005
08	AC8	SOFTWARE	GLU D:94 , HIS F:46 , GLU F:97 , ACT F:7006	BINDING SITE FOR RESIDUE ZN F 6006
09	AC9	SOFTWARE	HIS G:46 , GLU G:97 , ACT G:7007 , HOH G:7008	BINDING SITE FOR RESIDUE ZN G 6007
10	BC1	SOFTWARE	ACT B:7009 , HIS H:46 , GLU H:97 , ACT H:7008	BINDING SITE FOR RESIDUE ZN H 6008
11	BC2	SOFTWARE	CAC D:5001 , CAC D:5002 , GLU H:62	BINDING SITE FOR RESIDUE ZN D 6009
12	BC3	SOFTWARE	GLU A:97 , ZN A:6001 , ACT A:7002	BINDING SITE FOR RESIDUE ACT A 7001
13	BC4	SOFTWARE	ALA A:45 , LYS A:93 , ZN A:6001 , ACT A:7001 , HOH A:7074 , ARG G:33	BINDING SITE FOR RESIDUE ACT A 7002
14	BC5	SOFTWARE	HIS B:46 , LYS B:49 , GLU B:97 , ALA B:101 , LEU B:104 , ZN B:6002 , LYS H:93 , GLU H:94	BINDING SITE FOR RESIDUE ACT B 7003
15	BC6	SOFTWARE	GLU C:97 , ZN C:6003	BINDING SITE FOR RESIDUE ACT C 7004
16	BC7	SOFTWARE	HIS E:46 , LYS E:49 , GLU E:97 , ALA E:101 , LEU E:104 , ZN E:6005 , HOH E:7052	BINDING SITE FOR RESIDUE ACT E 7005
17	BC8	SOFTWARE	LYS D:93 , GLU D:94 , HIS F:46 , GLU F:97 , ALA F:101 , ZN F:6006 , HOH F:7041	BINDING SITE FOR RESIDUE ACT F 7006
18	BC9	SOFTWARE	HIS G:46 , GLU G:97 , ZN G:6007	BINDING SITE FOR RESIDUE ACT G 7007
19	CC1	SOFTWARE	GLU H:97 , ALA H:101 , LEU H:104 , ZN H:6008	BINDING SITE FOR RESIDUE ACT H 7008
20	CC2	SOFTWARE	ZN H:6008	BINDING SITE FOR RESIDUE ACT B 7009

Asymmetric Unit

No.	Residues
1	A:29	-	A:32
2	B:29	-	B:32
3	C:29	-	C:32
4	D:29	-	D:32
5	E:29	-	E:32
6	F:29	-	F:32
7	G:29	-	G:32
8	H:29	-	H:32

Asymmetric Unit

No.	Residues
1	Ile A:72	-	Pro A:73
2	Ile B:72	-	Pro B:73
3	Ile C:72	-	Pro C:73
4	Ile D:72	-	Pro D:73
5	Ile E:72	-	Pro E:73
6	Ile F:72	-	Pro F:73
7	Ile G:72	-	Pro G:73
8	Ile H:72	-	Pro H:73

(no "SAP(SNP)/Variant" information available for 1NW2)

Asymmetric Unit (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	8	A:1-105 B:1-105 C:1-105 D:1-105 E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	8	A:21-39 B:21-39 C:21-39 D:21-39 E:21-39 F:21-39 G:21-39 H:21-39

Biological Unit 1 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	4	A:1-105 B:1-105 C:1-105 D:1-105 - - - -
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	4	A:21-39 B:21-39 C:21-39 D:21-39 - - - -

Biological Unit 2 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	4	- - - - E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	4	- - - - E:21-39 F:21-39 G:21-39 H:21-39

Biological Unit 3 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	8	A:1-105 B:1-105 C:1-105 D:1-105 E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	8	A:21-39 B:21-39 C:21-39 D:21-39 E:21-39 F:21-39 G:21-39 H:21-39

Biological Unit 4 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	8	A:1-105 B:1-105 C:1-105 D:1-105 E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	8	A:21-39 B:21-39 C:21-39 D:21-39 E:21-39 F:21-39 G:21-39 H:21-39

Biological Unit 5 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	8	A:1-105 B:1-105 C:1-105 D:1-105 E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	8	A:21-39 B:21-39 C:21-39 D:21-39 E:21-39 F:21-39 G:21-39 H:21-39

Biological Unit 6 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOREDOXIN_2	PS51352	Thioredoxin domain profile.	THIO_ALIAC	1-105	8	A:1-105 B:1-105 C:1-105 D:1-105 E:1-105 F:1-105 G:1-105 H:1-105
2	THIOREDOXIN_1	PS00194	Thioredoxin family active site.	THIO_ALIAC	21-39	8	A:21-39 B:21-39 C:21-39 D:21-39 E:21-39 F:21-39 G:21-39 H:21-39

(no "Exon" information available for 1NW2)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2a_ A: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2A00 A:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee...hhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: A:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 A   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain B from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2b_ B: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2B00 B:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee...hhhhhhh....eeeeee.....hhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: B:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 B   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain C from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2c_ C: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2C00 C:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee...hhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: C:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 C   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain D from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2d_ D: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2D00 D:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee....hhhhhhh....eeeeee.....hhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: D:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 D   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain E from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2e_ E: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2E00 E:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee...hhhhhh.....eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: E:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 E   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain F from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2f_ F: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2F00 F:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee...hhhhhh.....eeeeee.....hhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: F:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 F   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain G from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2g_ G: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2G00 G:1-105 Glutaredoxin                                                                              CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee...hhhhhh.....eeeeee...hhhhhhhhhhhhhhhhh.....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: G:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 G   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Chain H from PDB  Type:PROTEIN  Length:105
 aligned with THIO_ALIAC | P80579 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:105
                                    10        20        30        40        50        60        70        80        90       100     
           THIO_ALIAC     1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVLQ 105
               SCOP domains d1nw2h_ H: Thioredoxin                                                                                    SCOP domains
               CATH domains 1nw2H00 H:1-105 Glutaredoxin                                                                              CATH domains
           Pfam domains (1) Thioredoxin-1nw2H01 H:1-103                                                                            -- Pfam domains (1)
           Pfam domains (2) Thioredoxin-1nw2H02 H:1-103                                                                            -- Pfam domains (2)
           Pfam domains (3) Thioredoxin-1nw2H03 H:1-103                                                                            -- Pfam domains (3)
           Pfam domains (4) Thioredoxin-1nw2H04 H:1-103                                                                            -- Pfam domains (4)
           Pfam domains (5) Thioredoxin-1nw2H05 H:1-103                                                                            -- Pfam domains (5)
           Pfam domains (6) Thioredoxin-1nw2H06 H:1-103                                                                            -- Pfam domains (6)
           Pfam domains (7) Thioredoxin-1nw2H07 H:1-103                                                                            -- Pfam domains (7)
           Pfam domains (8) Thioredoxin-1nw2H08 H:1-103                                                                            -- Pfam domains (8)
         Sec.struct. author ..eee...hhhhhh.....eeeeee.....hhhhhhhhhhhhhhhh....eeeeee...hhhhhhhh......eeeeee..eeeeeee...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: H:1-105 UniProt: 1-105                                                                PROSITE (1)
                PROSITE (2) --------------------THIOREDOXIN_1      ------------------------------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 1nw2 H   1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ 105
                                    10        20        30        40        50        60        70        80        90       100

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Thioredoxin fold (994)

Superfamily: Thioredoxin-like (992)

Family: Thioltransferase (167)

Protein domain: Thioredoxin (106)

Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212] (4)

1a	d1nw2a_	A:
1b	d1nw2b_	B:
1c	d1nw2c_	C:
1d	d1nw2d_	D:
1e	d1nw2e_	E:
1f	d1nw2f_	F:
1g	d1nw2g_	G:
1h	d1nw2h_	H:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Glutaredoxin (620)

Homologous Superfamily: Glutaredoxin (617)

Alicyclobacillus acidocaldarius. Organism_taxid: 405212. (3)

1a	1nw2A00	A:1-105
1b	1nw2G00	G:1-105
1c	1nw2H00	H:1-105
1d	1nw2B00	B:1-105
1e	1nw2C00	C:1-105
1f	1nw2D00	D:1-105
1g	1nw2E00	E:1-105
1h	1nw2F00	F:1-105

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Thioredoxin (367)

Family: Thioredoxin (82)

Alicyclobacillus acidocaldarius (Bacillus acidocaldarius) (3)

1a	Thioredoxin-1nw2H01	H:1-103
1b	Thioredoxin-1nw2H02	H:1-103
1c	Thioredoxin-1nw2H03	H:1-103
1d	Thioredoxin-1nw2H04	H:1-103
1e	Thioredoxin-1nw2H05	H:1-103
1f	Thioredoxin-1nw2H06	H:1-103
1g	Thioredoxin-1nw2H07	H:1-103
1h	Thioredoxin-1nw2H08	H:1-103

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (THIO_ALIAC | P80579)

molecular function
	GO:0015035	protein disulfide oxidoreductase activity	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
	GO:0045454	cell redox homeostasis	Any process that maintains the redox environment of a cell or compartment within a cell.
	GO:0006662	glycerol ether metabolic process	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Asymmetric Unit
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	1.8.1.9
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	THIO_ALIAC \| P80579	:	1nsw 1quw 1rqm

1nsw
1quw	SOLUTION STRUCTURE OF THE THIOREDOXIN FROM BACILLUS ACIDOCALDARIUS
2trx	CRYSTAL STRUCTURE OF THIOREDOXIN FROM ESCHERICHIA COLI

Description

Compounds

Structural Features

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Ligands, Modified Residues, Ions (3, 20)

Sites (20, 20)

SS Bonds (8, 8)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 16)

Exons (0, 0)

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