Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  N249Y MUTANT OF ALCOHOL DEHYDROGENASE FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS-MONOCLINIC CRYSTAL FORM
 
Authors :  L. Esposito, I. Bruno, F. Sica, C. A. Raia, A. Giordano, M. Rossi, L. Mazz A. Zagari
Date :  30 Jan 03  (Deposition) - 26 Aug 03  (Release) - 15 Feb 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.94
Chains :  Asym. Unit :  A,B,C,D,E,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,H  (2x)
Keywords :  Archaeon, Nad(H)-Dependent, Mutant, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Esposito, I. Bruno, F. Sica, C. A. Raia, A. Giordano, M. Rossi, L. Mazzarella, A. Zagari
Structural Study Of A Single-Point Mutant Of Sulfolobus Solfataricus Alcohol Dehydrogenase With Enhanced Activity.
Febs Lett. V. 539 14 2003
PubMed-ID: 12650918  |  Reference-DOI: 10.1016/S0014-5793(03)00173-X
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NAD-DEPENDENT ALCOHOL DEHYDROGENASE
    Chains: A, B, C, D, E, H
    EC Number: 1.1.1.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PTRC99A
    Expression System Strain: RB791
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ADH
    Mutation: YES
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 2287

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEH
Biological Unit 1 (1x): ABCD  
Biological Unit 2 (2x):     EH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 12)

Asymmetric Unit (1, 12)
No.NameCountTypeFull Name
1ZN12Ligand/IonZINC ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1ZN-1Ligand/IonZINC ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1ZN-1Ligand/IonZINC ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:98 , CYS A:101 , CYS A:104 , CYS A:112BINDING SITE FOR RESIDUE ZN A 400
02AC2SOFTWARECYS A:38 , HIS A:68 , GLU A:69 , CYS A:154BINDING SITE FOR RESIDUE ZN A 500
03AC3SOFTWAREGLU B:98 , CYS B:101 , CYS B:104 , CYS B:112BINDING SITE FOR RESIDUE ZN B 400
04AC4SOFTWARECYS B:38 , HIS B:68 , GLU B:69 , CYS B:154BINDING SITE FOR RESIDUE ZN B 500
05AC5SOFTWAREGLU C:98 , CYS C:101 , CYS C:104 , CYS C:112BINDING SITE FOR RESIDUE ZN C 400
06AC6SOFTWARECYS C:38 , HIS C:68 , GLU C:69 , CYS C:154BINDING SITE FOR RESIDUE ZN C 500
07AC7SOFTWAREGLU D:98 , CYS D:101 , CYS D:104 , CYS D:112BINDING SITE FOR RESIDUE ZN D 400
08AC8SOFTWARECYS D:38 , HIS D:68 , GLU D:69 , CYS D:154BINDING SITE FOR RESIDUE ZN D 500
09AC9SOFTWAREGLU E:98 , CYS E:101 , CYS E:104 , CYS E:112BINDING SITE FOR RESIDUE ZN E 400
10BC1SOFTWARECYS E:38 , HIS E:68 , GLU E:69 , CYS E:154BINDING SITE FOR RESIDUE ZN E 500
11BC2SOFTWAREGLU H:98 , CYS H:101 , CYS H:104 , CYS H:112BINDING SITE FOR RESIDUE ZN H 400
12BC3SOFTWARECYS H:38 , HIS H:68 , GLU H:69 , CYS H:154BINDING SITE FOR RESIDUE ZN H 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NTO)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Leu A:62 -Pro A:63
2Leu B:62 -Pro B:63
3Leu C:62 -Pro C:63
4Leu D:62 -Pro D:63
5Leu E:62 -Pro E:63
6Leu H:62 -Pro H:63

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NTO)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_ZINCPS00059 Zinc-containing alcohol dehydrogenases signature.ADH_SULSO67-81
 
 
 
 
 		  6A:67-81
B:67-81
C:67-81
D:67-81
E:67-81
H:67-81
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_ZINCPS00059 Zinc-containing alcohol dehydrogenases signature.ADH_SULSO67-81
 
 
 
 
 		  4A:67-81
B:67-81
C:67-81
D:67-81
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_ZINCPS00059 Zinc-containing alcohol dehydrogenases signature.ADH_SULSO67-81
 
 
 
 
 		  4-
-
-
-
E:67-81
H:67-81

(-) Exons   (0, 0)

(no "Exon" information available for 1NTO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntoa1 A:1-143,A:314-347 Alcohol dehydrogenase                                                                                                d1ntoa2 A:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntoa1 A:1-143,A:314-347          SCOP domains
               CATH domains 1ntoA01 A:1-158,A:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoA02 A:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoA01 A:1-158,A:296-347                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeeehhhhhhhh..ee..ee..........ee...eeeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.....eeeeehhhhhhhh.eeeee...hhhhhhhhhhhhhh.......eeeee..hhhhhhhhhhh.....eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto A   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       


Chain B from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntob1 B:1-143,B:314-347 Alcohol dehydrogenase                                                                                                d1ntob2 B:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntob1 B:1-143,B:314-347          SCOP domains
               CATH domains 1ntoB01 B:1-158,B:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoB02 B:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoB01 B:1-158,B:296-347                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeeehhhhhhhh..................ee....eeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh...eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.....eeeeehhhhhhhh.eeeee...hhhhhhhhhhhhhh.......eeeee..hhhhhhhhhhh.....eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto B   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       


Chain C from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntoc1 C:1-143,C:314-347 Alcohol dehydrogenase                                                                                                d1ntoc2 C:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntoc1 C:1-143,C:314-347          SCOP domains
               CATH domains 1ntoC01 C:1-158,C:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoC02 C:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoC01 C:1-158,C:296-347                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeee.hhhhhhh..................ee...eeeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh...eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.....eeeeehhhhhhhh.eeeee...hhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhh.....eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto C   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       


Chain D from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntod1 D:1-143,D:314-347 Alcohol dehydrogenase                                                                                                d1ntod2 D:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntod1 D:1-143,D:314-347          SCOP domains
               CATH domains 1ntoD01 D:1-158,D:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoD02 D:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoD01 D:1-158,D:296-347                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeeehhhhhhhhh.ee..ee..........ee...eeeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.....eeeeehhhhhhhh.eeee....hhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhh.....eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto D   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       


Chain E from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntoe1 E:1-143,E:314-347 Alcohol dehydrogenase                                                                                                d1ntoe2 E:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntoe1 E:1-143,E:314-347          SCOP domains
               CATH domains 1ntoE01 E:1-158,E:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoE02 E:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoE01 E:1-158,E:296-347                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeeehhhhhhhh..................ee...eeeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.........hhhhhhhhh.eeeee...hhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhh.....eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto E   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       


Chain H from PDB  Type:PROTEIN  Length:347
 aligned with ADH_SULSO | P39462 from UniProtKB/Swiss-Prot  Length:347

    Alignment length:347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       
            ADH_SULSO     1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
               SCOP domains d1ntoh1 H:1-143,H:314-347 Alcohol dehydrogenase                                                                                                d1ntoh2 H:144-313 Alcohol dehydrogenase                                                                                                                                   d1ntoh1 H:1-143,H:314-347          SCOP domains
               CATH domains 1ntoH01 H:1-158,H:296-347 Medium-chain alcohol dehydrogenases, catalytic domain                                                                               1ntoH02 H:159-295 NAD(P)-binding Rossmann-like Domain                                                                                    1ntoH01 H:1-158,H:296-347                            CATH domains
           Pfam domains (1) ------------------------ADH_N-1ntoH01 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH07 H:182-311                                                                                                      ------------------------------------ Pfam domains (1)
           Pfam domains (2) ------------------------ADH_N-1ntoH02 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH08 H:182-311                                                                                                      ------------------------------------ Pfam domains (2)
           Pfam domains (3) ------------------------ADH_N-1ntoH03 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH09 H:182-311                                                                                                      ------------------------------------ Pfam domains (3)
           Pfam domains (4) ------------------------ADH_N-1ntoH04 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH10 H:182-311                                                                                                      ------------------------------------ Pfam domains (4)
           Pfam domains (5) ------------------------ADH_N-1ntoH05 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH11 H:182-311                                                                                                      ------------------------------------ Pfam domains (5)
           Pfam domains (6) ------------------------ADH_N-1ntoH06 H:25-141                                                                                               ----------------------------------------ADH_zinc_N-1ntoH12 H:182-311                                                                                                      ------------------------------------ Pfam domains (6)
         Sec.struct. author .eeeee.......eeee..........eeeeeeeeeehhhhhhhh..................ee...eeeeeeeee...........eeee..ee....hhhhhh.hhhhh...ee...........eeee.hhh.eee....hhhhhhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..eeee....hhhhhhhhhh....eeeeeee..hhhhhhhh...eeeeeeeeee.........hhhhhhhhh.eeeee...hhhhhhhhhhhhhh.......eeeehhhhhhhhhhhhhh.....eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ADH_ZINC       -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nto H   1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Fold: GroES-like (132)
(-)
Superfamily: GroES-like (130)
(-)
Family: Alcohol dehydrogenase-like, N-terminal domain (114)
(-)
Protein domain: Alcohol dehydrogenase (77)
(-)
Sulfolobus solfataricus [TaxId: 2287] (4)
1ad1ntoa1A:1-143,A:314-347
1bd1ntob1B:1-143,B:314-347
1cd1ntoc1C:1-143,C:314-347
1dd1ntod1D:1-143,D:314-347
1ed1ntoe1E:1-143,E:314-347
1fd1ntoh1H:1-143,H:314-347
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 12)

Asymmetric Unit
(-)
Clan: GroES (70)
(-)
Clan: NADP_Rossmann (1239)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,H   (ADH_SULSO | P39462)
molecular function
    GO:0004022    alcohol dehydrogenase (NAD) activity    Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Leu A:62 - Pro A:63   [ RasMol ]  
    Leu B:62 - Pro B:63   [ RasMol ]  
    Leu C:62 - Pro C:63   [ RasMol ]  
    Leu D:62 - Pro D:63   [ RasMol ]  
    Leu E:62 - Pro E:63   [ RasMol ]  
    Leu H:62 - Pro H:63   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1nto
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  ADH_SULSO | P39462
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  1.1.1.1
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  ADH_SULSO | P39462
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ADH_SULSO | P39462: 1jvb 1nvg 1r37 3i4c

(-) Related Entries Specified in the PDB File

1jvb NATIVE PROTEIN
1nvg