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(-) Description

Title :  CRYSTAL STRUCTURE OF PHL P 6, A MAJOR TIMOTHY GRASS POLLEN ALLERGEN CO-CRYSTALLIZED WITH ZINC
 
Authors :  A. A. Fedorov, T. Ball, E. V. Fedorov, S. Vrtala, R. Valenta, S. C. Almo, S. K. Burley, New York Sgx Research Center For Structural Geno (Nysgxrc)
Date :  07 Jan 03  (Deposition) - 21 Jan 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N  (1x)
Biol. Unit 2:  A,N  (1x)
Biol. Unit 3:  B (1x),H (1x)
Biol. Unit 4:  I,M  (1x)
Biol. Unit 5:  D,F  (1x)
Biol. Unit 6:  G,K  (1x)
Biol. Unit 7:  E,L  (1x)
Biol. Unit 8:  I,J  (1x)
Biol. Unit 9:  C,D  (1x)
Biol. Unit 10:  K,L  (1x)
Biol. Unit 11:  E,F  (1x)
Biol. Unit 12:  A,B  (1x)
Biol. Unit 13:  G,H  (1x)
Biol. Unit 14:  M,N  (1x)
Keywords :  Allergen Phl P 6, Four-Helix-Bundle, Structural Genomics, Psi, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc, Allergen (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Fedorov, T. Ball, E. V. Fedorov, S. Vrtala, R. Valenta, S. C. Almo
Crystal Structure Oh Phl P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized With Zinc
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - POLLEN ALLERGEN PHL P 6
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: PHLPVI
    Organism Common: TIMOTHY GRASS
    Organism Scientific: PHLEUM PRATENSE
    Organism Taxid: 15957
    Synonym: PHL P VI

 Structural Features

(-) Chains, Units

  1234567891011121314
Asymmetric Unit : ABCDEFGHIJKLMN
Biological Unit 1 (1x): ABCDEFGHIJKLMN
Biological Unit 2 (1x): A            N
Biological Unit 3 (1x):  B (1x)     H (1x)      
Biological Unit 4 (1x):         I   M 
Biological Unit 5 (1x):    D F        
Biological Unit 6 (1x):       G   K   
Biological Unit 7 (1x):     E      L  
Biological Unit 8 (1x):         IJ    
Biological Unit 9 (1x):   CD          
Biological Unit 10 (1x):           KL  
Biological Unit 11 (1x):     EF        
Biological Unit 12 (1x): AB            
Biological Unit 13 (1x):       GH      
Biological Unit 14 (1x):             MN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 35)

Asymmetric Unit (2, 35)
No.NameCountTypeFull Name
1ARS7Ligand/IonARSENIC
2ZN28Ligand/IonZINC ION
Biological Unit 1 (1, 7)
No.NameCountTypeFull Name
1ARS7Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 7 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 9 (1, 2)
No.NameCountTypeFull Name
1ARS2Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 10 (1, 2)
No.NameCountTypeFull Name
1ARS2Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 11 (0, 0)
No.NameCountTypeFull Name
1ARS-1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 12 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 13 (0, 0)
No.NameCountTypeFull Name
1ARS-1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION
Biological Unit 14 (1, 1)
No.NameCountTypeFull Name
1ARS1Ligand/IonARSENIC
2ZN-1Ligand/IonZINC ION

(-) Sites  (35, 35)

Asymmetric Unit (35, 35)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:476 , ASN B:673 , ASP B:676 , HIS B:677 , GLU H:1903BINDING SITE FOR RESIDUE ZN A 5001
02AC2SOFTWAREASN A:473 , ASP A:476 , HIS A:477 , ASP B:676 , GLU N:3103BINDING SITE FOR RESIDUE ZN B 5002
03AC3SOFTWAREASP C:876 , ASN D:1073 , ASP D:1076 , HIS D:1077 , GLU F:1503BINDING SITE FOR RESIDUE ZN C 5003
04AC4SOFTWAREASN C:873 , ASP C:876 , HIS C:877 , ASP D:1076 , GLU J:2303BINDING SITE FOR RESIDUE ZN D 5004
05AC5SOFTWAREGLU D:1103 , ASP E:1276 , ASN F:1473 , ASP F:1476 , HIS F:1477BINDING SITE FOR RESIDUE ZN E 5005
06AC6SOFTWAREASN E:1273 , ASP E:1276 , HIS E:1277 , ASP F:1476 , GLU L:2703BINDING SITE FOR RESIDUE ZN F 5006
07AC7SOFTWAREGLU B:703 , ASP G:1676 , ASN H:1873 , ASP H:1876 , HIS H:1877BINDING SITE FOR RESIDUE ZN G 5007
08AC8SOFTWAREASN G:1673 , ASP G:1676 , HIS G:1677 , ASP H:1876 , GLU K:2503BINDING SITE FOR RESIDUE ZN H 5008
09AC9SOFTWAREGLU C:903 , ASP I:2076 , ASN J:2273 , ASP J:2276 , HIS J:2277BINDING SITE FOR RESIDUE ZN I 5009
10BC1SOFTWAREASN I:2073 , ASP I:2076 , HIS I:2077 , ASP J:2276 , GLU M:2903BINDING SITE FOR RESIDUE ZN J 5010
11BC2SOFTWAREGLU E:1303 , ASP K:2476 , ASN L:2673 , ASP L:2676 , HIS L:2677BINDING SITE FOR RESIDUE ZN K 5011
12BC3SOFTWAREGLU G:1703 , ASN K:2473 , ASP K:2476 , HIS K:2477 , ASP L:2676BINDING SITE FOR RESIDUE ZN L 5012
13BC4SOFTWAREGLU A:503 , ASP M:2876 , ASN N:3073 , ASP N:3076 , HIS N:3077BINDING SITE FOR RESIDUE ZN M 5013
14BC5SOFTWAREGLU I:2103 , ASN M:2873 , ASP M:2876 , HIS M:2877 , ASP N:3076BINDING SITE FOR RESIDUE ZN N 5014
15BC6SOFTWAREHIS A:490 , GLU N:3093 , HIS N:3105 , ARS N:7001BINDING SITE FOR RESIDUE ZN A 6001
16BC7SOFTWAREHIS B:690 , ARS B:7002 , GLU H:1893 , HIS H:1905BINDING SITE FOR RESIDUE ZN B 6002
17BC8SOFTWAREHIS C:890 , ARS C:7003 , GLU J:2293 , HIS J:2305BINDING SITE FOR RESIDUE ZN C 6003
18BC9SOFTWAREHIS D:1090 , ARS D:7004 , GLU F:1493 , HIS F:1505BINDING SITE FOR RESIDUE ZN D 6004
19CC1SOFTWAREHIS E:1290 , GLU L:2693 , HIS L:2705 , ARS L:7005BINDING SITE FOR RESIDUE ZN E 6005
20CC2SOFTWAREGLU D:1093 , HIS D:1105 , ARS D:7004 , HIS F:1490BINDING SITE FOR RESIDUE ZN F 6006
21CC3SOFTWAREHIS G:1690 , GLU K:2493 , HIS K:2505 , ARS K:7007BINDING SITE FOR RESIDUE ZN G 6007
22CC4SOFTWAREGLU B:693 , HIS B:705 , ARS B:7002 , HIS H:1890BINDING SITE FOR RESIDUE ZN H 6008
23CC5SOFTWAREHIS I:2090 , ARS I:7009 , GLU M:2893 , HIS M:2905BINDING SITE FOR RESIDUE ZN I 6009
24CC6SOFTWAREGLU C:893 , HIS C:905 , ARS C:7003 , HIS J:2290BINDING SITE FOR RESIDUE ZN J 6010
25CC7SOFTWAREGLU G:1693 , HIS G:1705 , HIS K:2490 , ARS K:7007BINDING SITE FOR RESIDUE ZN K 6011
26CC8SOFTWAREGLU E:1293 , HIS E:1305 , HIS L:2690 , ARS L:7005BINDING SITE FOR RESIDUE ZN L 6012
27CC9SOFTWAREGLU I:2093 , HIS I:2105 , ARS I:7009 , HIS M:2890BINDING SITE FOR RESIDUE ZN M 6013
28DC1SOFTWAREGLU A:493 , HIS A:505 , HIS N:3090 , ARS N:7001BINDING SITE FOR RESIDUE ZN N 6014
29DC2SOFTWAREZN A:6001 , ZN N:6014BINDING SITE FOR RESIDUE ARS N 7001
30DC3SOFTWAREZN B:6002 , ZN H:6008BINDING SITE FOR RESIDUE ARS B 7002
31DC4SOFTWAREZN C:6003 , GLU J:2293 , ZN J:6010BINDING SITE FOR RESIDUE ARS C 7003
32DC5SOFTWAREZN D:6004 , ZN F:6006BINDING SITE FOR RESIDUE ARS D 7004
33DC6SOFTWAREZN E:6005 , GLU L:2693 , ZN L:6012BINDING SITE FOR RESIDUE ARS L 7005
34DC7SOFTWAREGLU G:1693 , ZN G:6007 , ZN K:6011BINDING SITE FOR RESIDUE ARS K 7007
35DC8SOFTWAREGLU I:2093 , ZN I:6009 , GLU M:2893 , ZN M:6013BINDING SITE FOR RESIDUE ARS I 7009

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NLX)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1NLX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NLX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1NLX)

(-) Exons   (0, 0)

(no "Exon" information available for 1NLX)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxa_ A: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxA00 A:404-507  [code=1.20.120.320, no name defined]                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx A  404 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  507
                                   413       423       433       443       453       463       473       483       493       503    


Chain B from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxb_ B: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxB00 B:604-707  [code=1.20.120.320, no name defined]                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx B  604 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  707
                                   613       623       633       643       653       663       673       683       693       703    


Chain C from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxc_ C: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxC00 C:804-907  [code=1.20.120.320, no name defined]                                                  CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx C  804 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  907
                                   813       823       833       843       853       863       873       883       893       903    


Chain D from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxd_ D: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxD00 D:1004-1107  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx D 1004 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 1107
                                  1013      1023      1033      1043      1053      1063      1073      1083      1093      1103    


Chain E from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxe_ E: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxE00 E:1204-1307  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx E 1204 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 1307
                                  1213      1223      1233      1243      1253      1263      1273      1283      1293      1303    


Chain F from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxf_ F: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxF00 F:1404-1507  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx F 1404 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 1507
                                  1413      1423      1433      1443      1453      1463      1473      1483      1493      1503    


Chain G from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxg_ G: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxG00 G:1604-1707  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx G 1604 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 1707
                                  1613      1623      1633      1643      1653      1663      1673      1683      1693      1703    


Chain H from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxh_ H: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxH00 H:1804-1907  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx H 1804 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 1907
                                  1813      1823      1833      1843      1853      1863      1873      1883      1893      1903    


Chain I from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxi_ I: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxI00 I:2004-2107  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx I 2004 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 2107
                                  2013      2023      2033      2043      2053      2063      2073      2083      2093      2103    


Chain J from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxj_ J: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxJ00 J:2204-2307  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx J 2204 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 2307
                                  2213      2223      2233      2243      2253      2263      2273      2283      2293      2303    


Chain K from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxk_ K: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxK00 K:2404-2507  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx K 2404 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 2507
                                  2413      2423      2433      2443      2453      2463      2473      2483      2493      2503    


Chain L from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxl_ L: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxL00 L:2604-2707  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx L 2604 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 2707
                                  2613      2623      2633      2643      2653      2663      2673      2683      2693      2703    


Chain M from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxm_ M: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxM00 M:2804-2907  [code=1.20.120.320, no name defined]                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx M 2804 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 2907
                                  2813      2823      2833      2843      2853      2863      2873      2883      2893      2903    


Chain N from PDB  Type:PROTEIN  Length:104
 aligned with MPAP6_PHLPR | P43215 from UniProtKB/Swiss-Prot  Length:132

    Alignment length:104
                                    34        44        54        64        74        84        94       104       114       124    
         MPAP6_PHLPR     25 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV  128
               SCOP domains d1nlxn_ N: Pollen allergen Phl P 6                                                                       SCOP domains
               CATH domains 1nlxN00 N:3004-3107  [code=1.20.120.320, no name defined]                                                CATH domains
           Pfam domains (1) Pollen_allerg_2-1nlxN01 N:3004-3107                                                                      Pfam domains (1)
           Pfam domains (2) Pollen_allerg_2-1nlxN02 N:3004-3107                                                                      Pfam domains (2)
           Pfam domains (3) Pollen_allerg_2-1nlxN03 N:3004-3107                                                                      Pfam domains (3)
           Pfam domains (4) Pollen_allerg_2-1nlxN04 N:3004-3107                                                                      Pfam domains (4)
           Pfam domains (5) Pollen_allerg_2-1nlxN05 N:3004-3107                                                                      Pfam domains (5)
           Pfam domains (6) Pollen_allerg_2-1nlxN06 N:3004-3107                                                                      Pfam domains (6)
           Pfam domains (7) Pollen_allerg_2-1nlxN07 N:3004-3107                                                                      Pfam domains (7)
           Pfam domains (8) Pollen_allerg_2-1nlxN08 N:3004-3107                                                                      Pfam domains (8)
           Pfam domains (9) Pollen_allerg_2-1nlxN09 N:3004-3107                                                                      Pfam domains (9)
          Pfam domains (10) Pollen_allerg_2-1nlxN10 N:3004-3107                                                                      Pfam domains (10)
          Pfam domains (11) Pollen_allerg_2-1nlxN11 N:3004-3107                                                                      Pfam domains (11)
          Pfam domains (12) Pollen_allerg_2-1nlxN12 N:3004-3107                                                                      Pfam domains (12)
          Pfam domains (13) Pollen_allerg_2-1nlxN13 N:3004-3107                                                                      Pfam domains (13)
          Pfam domains (14) Pollen_allerg_2-1nlxN14 N:3004-3107                                                                      Pfam domains (14)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                1nlx N 3004 ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV 3107
                                  3013      3023      3033      3043      3053      3063      3073      3083      3093      3103
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 14)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 14)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)
(-)
Architecture: Up-down Bundle (3216)
(-)
Topology: Four Helix Bundle (Hemerythrin (Met), subunit A) (300)
(-)
Homologous Superfamily: [code=1.20.120.320, no name defined] (2)
(-)
Timothy grass (Phleum pratense) (2)
1a1nlxA00A:404-507
1b1nlxJ00J:2204-2307
1c1nlxK00K:2404-2507
1d1nlxL00L:2604-2707
1e1nlxM00M:2804-2907
1f1nlxN00N:3004-3107
1g1nlxB00B:604-707
1h1nlxC00C:804-907
1i1nlxD00D:1004-1107
1j1nlxE00E:1204-1307
1k1nlxF00F:1404-1507
1l1nlxG00G:1604-1707
1m1nlxH00H:1804-1907
1n1nlxI00I:2004-2107

(-) Pfam Domains  (1, 14)

Asymmetric Unit
(-)
Clan: no clan defined [family: Pollen_allerg_2] (2)

(-) Gene Ontology  (0, 0)

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