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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 42)
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Asymmetric Unit (41, 41)
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(no "SS Bond" information available for 1LVO) |
(no "Cis Peptide Bond" information available for 1LVO) |
(no "SAP(SNP)/Variant" information available for 1LVO) |
Asymmetric Unit (1, 6)
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(no "Exon" information available for 1LVO) |
Asymmetric UnitChain A from PDB Type:PROTEIN Length:299 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvoa_ A: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoA01 A:14-97 Trypsin-like serine proteases 1lvoA02 A:98-185 Trypsin-like serine proteases -----------1lvoA03 A:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE M_PRO PDB: A:1-299 UniProt: 2879-3180 PROSITE Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo A 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 Chain A from PDB Type:PROTEIN Length:299 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvoa_ A: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoA01 A:14-97 Trypsin-like serine proteases 1lvoA02 A:98-185 Trypsin-like serine proteases -----------1lvoA03 A:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) M_PRO PDB: A:1-299 UniProt: 2879-3180 PROSITE (2) Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo A 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 Chain B from PDB Type:PROTEIN Length:300 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:300 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 3178 SCOP domains d1lvob_ B: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoB01 B:14-97 Trypsin-like serine proteases 1lvoB02 B:98-185 Trypsin-like serine proteases -----------1lvoB03 B:197-299 main proteinase (3clpro) structure, domain 3 - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE M_PRO PDB: B:1-300 UniProt: 2879-3180 PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1lvo B 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 300 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain B from PDB Type:PROTEIN Length:300 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:300 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 3178 SCOP domains d1lvob_ B: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoB01 B:14-97 Trypsin-like serine proteases 1lvoB02 B:98-185 Trypsin-like serine proteases -----------1lvoB03 B:197-299 main proteinase (3clpro) structure, domain 3 - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (2) M_PRO PDB: B:1-300 UniProt: 2879-3180 PROSITE (2) Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1lvo B 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 300 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain C from PDB Type:PROTEIN Length:300 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:300 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 3178 SCOP domains d1lvoc_ C: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoC01 C:14-97 Trypsin-like serine proteases 1lvoC02 C:98-185 Trypsin-like serine proteases -----------1lvoC03 C:197-299 main proteinase (3clpro) structure, domain 3 - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE M_PRO PDB: C:1-300 UniProt: 2879-3180 PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1lvo C 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 300 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain C from PDB Type:PROTEIN Length:300 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:300 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 3178 SCOP domains d1lvoc_ C: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoC01 C:14-97 Trypsin-like serine proteases 1lvoC02 C:98-185 Trypsin-like serine proteases -----------1lvoC03 C:197-299 main proteinase (3clpro) structure, domain 3 - CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (2) M_PRO PDB: C:1-300 UniProt: 2879-3180 PROSITE (2) Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1lvo C 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVN 300 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain D from PDB Type:PROTEIN Length:301 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:301 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNL 3179 SCOP domains d1lvod_ D: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoD01 D:14-97 Trypsin-like serine proteases 1lvoD02 D:98-185 Trypsin-like serine proteases -----------1lvoD03 D:197-299 main proteinase (3clpro) structure, domain 3 -- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE M_PRO PDB: D:1-301 UniProt: 2879-3180 PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo D 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNL 301 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain D from PDB Type:PROTEIN Length:301 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:301 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 3178 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNL 3179 SCOP domains d1lvod_ D: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoD01 D:14-97 Trypsin-like serine proteases 1lvoD02 D:98-185 Trypsin-like serine proteases -----------1lvoD03 D:197-299 main proteinase (3clpro) structure, domain 3 -- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) M_PRO PDB: D:1-301 UniProt: 2879-3180 PROSITE (2) Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo D 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGVNL 301 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 Chain E from PDB Type:PROTEIN Length:299 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvoe_ E: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoE01 E:14-97 Trypsin-like serine proteases 1lvoE02 E:98-185 Trypsin-like serine proteases -----------1lvoE03 E:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE M_PRO PDB: E:1-299 UniProt: 2879-3180 PROSITE Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo E 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 Chain E from PDB Type:PROTEIN Length:299 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvoe_ E: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoE01 E:14-97 Trypsin-like serine proteases 1lvoE02 E:98-185 Trypsin-like serine proteases -----------1lvoE03 E:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) M_PRO PDB: E:1-299 UniProt: 2879-3180 PROSITE (2) Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo E 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 Chain F from PDB Type:PROTEIN Length:299 aligned with R1AB_CVPPU | P0C6Y5 from UniProtKB/Swiss-Prot Length:6684 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1AB_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvof_ F: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoF01 F:14-97 Trypsin-like serine proteases 1lvoF02 F:98-185 Trypsin-like serine proteases -----------1lvoF03 F:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains (1) ----------------------------Peptidase_C30-1lvoF01 F:29-299 Pfam domains (1) Pfam domains (2) ----------------------------Peptidase_C30-1lvoF02 F:29-299 Pfam domains (2) Pfam domains (3) ----------------------------Peptidase_C30-1lvoF03 F:29-299 Pfam domains (3) Pfam domains (4) ----------------------------Peptidase_C30-1lvoF04 F:29-299 Pfam domains (4) Pfam domains (5) ----------------------------Peptidase_C30-1lvoF05 F:29-299 Pfam domains (5) Pfam domains (6) ----------------------------Peptidase_C30-1lvoF06 F:29-299 Pfam domains (6) SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE M_PRO PDB: F:1-299 UniProt: 2879-3180 PROSITE Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo F 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 Chain F from PDB Type:PROTEIN Length:299 aligned with R1A_CVPPU | P0C6V2 from UniProtKB/Swiss-Prot Length:4017 Alignment length:299 2888 2898 2908 2918 2928 2938 2948 2958 2968 2978 2988 2998 3008 3018 3028 3038 3048 3058 3068 3078 3088 3098 3108 3118 3128 3138 3148 3158 3168 R1A_CVPPU 2879 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 3177 SCOP domains d1lvof_ F: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) SCOP domains CATH domains -------------1lvoF01 F:14-97 Trypsin-like serine proteases 1lvoF02 F:98-185 Trypsin-like serine proteases -----------1lvoF03 F:197-299 main proteinase (3clpro) structure, domain 3 CATH domains Pfam domains (1) ----------------------------Peptidase_C30-1lvoF01 F:29-299 Pfam domains (1) Pfam domains (2) ----------------------------Peptidase_C30-1lvoF02 F:29-299 Pfam domains (2) Pfam domains (3) ----------------------------Peptidase_C30-1lvoF03 F:29-299 Pfam domains (3) Pfam domains (4) ----------------------------Peptidase_C30-1lvoF04 F:29-299 Pfam domains (4) Pfam domains (5) ----------------------------Peptidase_C30-1lvoF05 F:29-299 Pfam domains (5) Pfam domains (6) ----------------------------Peptidase_C30-1lvoF06 F:29-299 Pfam domains (6) SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE (2) M_PRO PDB: F:1-299 UniProt: 2879-3180 PROSITE (2) Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1lvo F 1 SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLGDEVICPRHVIASDTTRVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVNQVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAGTCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEKLLDSIVRLNKGFGGRTILSYGSLCDEFTPTEVIRQMYGV 299 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
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Asymmetric Unit |
Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,B,C,D,E,F (R1AB_CVPPU | P0C6Y5)
Chain A,B,C,D,E,F (R1A_CVPPU | P0C6V2)
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