1LNW - JenaLib

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE MEXR REPRESSOR OF THE MEXAB-OPRM MULTIDRUG EFFLUX OPERON OF PSEUDOMONAS AERUGINOSA

Authors :   D. C. Lim, K. Poole, N. C. J. Strynadka

Date :   03 May 02 (Deposition) - 11 Sep 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)
Biol. Unit 5: A (1x),B (1x),C (1x),D (1x),G (1x),H (1x)
Biol. Unit 6: A (1x),B (1x),G (1x),H (1x)
Biol. Unit 7: A,B,C,D  (1x)

Keywords :   Mexr, Repressor, Dna Binding Protein, Regulator Of Mexrab- Oprm Operon, Transcription Repressor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Lim, K. Poole, N. C. Strynadka
Crystal Structure Of The Mexr Repressor Of The Mexrab-Oprm Multidrug Efflux Operon Of Pseudomonas Aeruginosa.
J. Biol. Chem. V. 277 29253 2002
PubMed-ID: 12034710 | Reference-DOI: 10.1074/JBC.M111381200
(for further references see the PDB file header)

Molecule 1 - MULTIDRUG RESISTANCE OPERON REPRESSOR
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET41A
	Expression System Strain	:	BL21 LAMDADE3
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	287
	Synonym	:	MEXR

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H
Biological Unit 5 (1x)	:	A (1x)	B (1x)	C (1x)	D (1x)			G (1x)	H (1x)
Biological Unit 6 (1x)	:	A (1x)	B (1x)					G (1x)	H (1x)
Biological Unit 7 (1x)	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 33)

No.	Name	Count	Type	Full Name
1	MSE	33	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 8)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (1, 8)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 3 (1, 8)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 4 (1, 9)

No.	Name	Count	Type	Full Name
1	MSE	9	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 5 (0, 0)

No.	Name	Count	Type	Full Name
1	MSE	-1	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 6 (1, 8)

No.	Name	Count	Type	Full Name
1	MSE	8	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 7 (1, 16)

No.	Name	Count	Type	Full Name
1	MSE	16	Mod. Amino Acid	SELENOMETHIONINE

(no "Site" information available for 1LNW)

(no "SS Bond" information available for 1LNW)

(no "Cis Peptide Bond" information available for 1LNW)

Asymmetric Unit (5, 40)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	A/B/C/D/E/F/G/H	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	A/B/C/D/E/F/G/H	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	A/B/C/D/E/F/G/H	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	A/B/C/D/E/F/G/H	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	A/B/C/D/E/F/G/H	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (5, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	A/B	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	A/B	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	A/B	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	A/B	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	A/B	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (5, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	C/D	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	C/D	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	C/D	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	C/D	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	C/D	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (5, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	E/F	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	E/F	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	E/F	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	E/F	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	E/F	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (5, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	G/H	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	G/H	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	G/H	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	G/H	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	G/H	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 5 (5, 30)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	A/B/C/D/G/H	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	A/B/C/D/G/H	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	A/B/C/D/G/H	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	A/B/C/D/G/H	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	A/B/C/D/G/H	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 6 (5, 20)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	A/B/G/H	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	A/B/G/H	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	A/B/G/H	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	A/B/G/H	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	A/B/G/H	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 7 (5, 20)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_MEXR_PSEAE_001 *	T	69	A	MEXR_PSEAE	---	---	A/B/C/D	T	69	A
2	UniProt	VAR_MEXR_PSEAE_002 *	R	70	W	MEXR_PSEAE	---	---	A/B/C/D	R	70	W
3	UniProt	VAR_MEXR_PSEAE_003 *	L	95	F	MEXR_PSEAE	---	---	A/B/C/D	L	95	F
4	UniProt	VAR_MEXR_PSEAE_004 *	V	126	E	MEXR_PSEAE	---	---	A/B/C/D	V	126	E
5	UniProt	VAR_MEXR_PSEAE_005 *	T	130	S	MEXR_PSEAE	---	---	A/B/C/D	T	130	S
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	8	A:6-140 B:6-140 C:6-140 D:6-139 E:6-140 F:6-139 G:6-140 H:6-140

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	2	A:6-140 B:6-140 - - - - - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	2	- - C:6-140 D:6-139 - - - -

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	2	- - - - E:6-140 F:6-139 - -

Biological Unit 4 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	2	- - - - - - G:6-140 H:6-140

Biological Unit 5 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	6	A:6-140 B:6-140 C:6-140 D:6-139 - - G:6-140 H:6-140

Biological Unit 6 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	4	A:6-140 B:6-140 - - - - G:6-140 H:6-140

Biological Unit 7 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	HTH_MARR_2	PS50995	MarR-type HTH domain profile.	MEXR_PSEAE	6-140	4	A:6-140 B:6-140 C:6-140 D:6-139 - - - -

(no "Exon" information available for 1LNW)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:141
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:141
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141 
           MEXR_PSEAE     2 NYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAAQ 142
               SCOP domains d1lnwa_ A: MexR repressor                                                                                                                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhhhhh..eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------AW------------------------F------------------------------E---S------------ SAPs(SNPs)
                    PROSITE ----HTH_MARR_2  PDB: A:6-140 UniProt: 6-140                                                                                                -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw A   2 NYPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLAAQ 142
                                    11  |     21        31        41        51        61        71        81        91       101       111|      121       131       141 
                                   10-MSE                                             61-MSE                                            112-MSE                          
                                       14-MSE

Chain B from PDB  Type:PROTEIN  Length:139
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:145
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142     
           MEXR_PSEAE     3 YPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAAQPLEDI 147
               SCOP domains d1lnwb_ B: MexR repressor                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhh..eeee------...eeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------AW------------------------F------------------------------E---S----------------- SAPs(SNPs)
                    PROSITE ---HTH_MARR_2  PDB: B:6-140 UniProt: 6-140                                                                                                ------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw B   3 YPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRE------RSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLAAQPLEDI 147
                                   |12 |      22        32        42        52        62        72        82 |      92       102       112       122       132       142     
                                  10-MSE                                             61-MSE                 84     91                  112-MSE                               
                                      14-MSE

Chain C from PDB  Type:PROTEIN  Length:139
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:146
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      
           MEXR_PSEAE     2 NYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAAQPLEDI 147
               SCOP domains d1lnwc_ C: MexR repressor                                                                                                                          SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhh..eee..-------..eeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------AW------------------------F------------------------------E---S----------------- SAPs(SNPs)
                    PROSITE ----HTH_MARR_2  PDB: C:6-140 UniProt: 6-140                                                                                                ------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw C   2 NYPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRER-------FQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLAAQPLEDI 147
                                    11  |     21        31        41        51        61        71        81   |     - |     101       111|      121       131       141      
                                   10-MSE                                             61-MSE                  85      93                112-MSE                               
                                       14-MSE

Chain D from PDB  Type:PROTEIN  Length:138
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:138
                                    11        21        31        41        51        61        71        81        91       101       111       121       131        
           MEXR_PSEAE     2 NYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCL 139
               SCOP domains d1lnwd_ D: MexR repressor                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh...eehhhhhhh...hhhhhhhhhhhhhhh..eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------AW------------------------F------------------------------E---S--------- SAPs(SNPs)
                    PROSITE ----HTH_MARR_2  PDB: D:6-139 UniProt: 6-140                                                                                                PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1lnw D   2 NYPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCL 139
                                    11  |     21        31        41        51        61        71        81        91       101       111|      121       131        
                                   10-MSE                                             61-MSE                                            112-MSE                       
                                       14-MSE

Chain E from PDB  Type:PROTEIN  Length:141
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:141
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141 
           MEXR_PSEAE     2 NYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAAQ 142
               SCOP domains d1lnwe_ E: MexR repressor                                                                                                                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh..eehhhhhhhhh.hhhhhhhhhhhhhh...eeee.........eeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------AW------------------------F------------------------------E---S------------ SAPs(SNPs)
                    PROSITE ----HTH_MARR_2  PDB: E:6-140 UniProt: 6-140                                                                                                -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw E   2 NYPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLAAQ 142
                                    11  |     21        31        41        51        61        71        81        91       101       111|      121       131       141 
                                   10-MSE                                             61-MSE                                            112-MSE                          
                                       14-MSE

Chain F from PDB  Type:PROTEIN  Length:130
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:137
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       
           MEXR_PSEAE     3 YPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCL 139
               SCOP domains d1lnwf_ F: MexR repressor                                                                                                                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhh..eeee.-------.eeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------AW------------------------F------------------------------E---S--------- SAPs(SNPs)
                    PROSITE ---HTH_MARR_2  PDB: F:6-139 UniProt: 6-140                                                                                                PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw F   3 YPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRER-------FQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCL 139
                                   |12 |      22        32        42        52        62        72        82  |      -|      102       112       122       132       
                                  10-MSE                                             61-MSE                  85      93                112-MSE                       
                                      14-MSE

Chain G from PDB  Type:PROTEIN  Length:134
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:138
                                    13        23        33        43        53        63        73        83        93       103       113       123       133        
           MEXR_PSEAE     4 PVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLAA 141
               SCOP domains d1lnwg_ G: MexR repressor                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhh..eeeee.----..eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------AW------------------------F------------------------------E---S----------- SAPs(SNPs)
                    PROSITE --HTH_MARR_2  PDB: G:6-140 UniProt: 6-140                                                                                                - PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1lnw G   4 PVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRERN----RSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLAA 141
                                  | 13|       23        33        43        53       |63        73        83  |    |93       103       113       123       133        
                                 10-MSE                                             61-MSE                   86   91                  112-MSE                         
                                     14-MSE

Chain H from PDB  Type:PROTEIN  Length:140
 aligned with MEXR_PSEAE | P52003 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:140
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
           MEXR_PSEAE     1 MNYPVNPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCLA 140
               SCOP domains d1lnwh_ H: MexR repressor                                                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------------------MarR-1lnwH01 H:35-93                                       ----------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------------------MarR-1lnwH02 H:35-93                                       ----------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----------------------------------MarR-1lnwH03 H:35-93                                       ----------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------MarR-1lnwH04 H:35-93                                       ----------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------------MarR-1lnwH05 H:35-93                                       ----------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------------MarR-1lnwH06 H:35-93                                       ----------------------------------------------- Pfam domains (6)
           Pfam domains (7) ----------------------------------MarR-1lnwH07 H:35-93                                       ----------------------------------------------- Pfam domains (7)
           Pfam domains (8) ----------------------------------MarR-1lnwH08 H:35-93                                       ----------------------------------------------- Pfam domains (8)
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhh..eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------AW------------------------F------------------------------E---S---------- SAPs(SNPs)
                    PROSITE -----HTH_MARR_2  PDB: H:6-140 UniProt: 6-140                                                                                                 PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lnw H   1 mNYPVNPDLmPALmAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQRGLNLQDLGRQmCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEAImSRVHDELFAPLTPVEQATLVHLLDQCLA 140
                            |       10   |    20        30        40        50        60|       70        80        90       100       110 |     120       130       140
                            1-MSE   10-MSE                                             61-MSE                                            112-MSE                        
                                        14-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: DNA/RNA-binding 3-helical bundle (1299)

Superfamily: Winged helix DNA-binding domain (576)

Family: MarR-like transcriptional regulators (34)

Protein domain: MexR repressor (3)

Pseudomonas aeruginosa [TaxId: 287] (3)

1a	d1lnwa_	A:
1b	d1lnwg_	G:
1c	d1lnwh_	H:
1d	d1lnwb_	B:
1e	d1lnwc_	C:
1f	d1lnwd_	D:
1g	d1lnwe_	E:
1h	d1lnwf_	F:

(no "CATH Domain" information available for 1LNW)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: HTH (544)

Family: MarR (16)

Pseudomonas aeruginosa (3)

1a	MarR-1lnwH01	H:35-93
1b	MarR-1lnwH02	H:35-93
1c	MarR-1lnwH03	H:35-93
1d	MarR-1lnwH04	H:35-93
1e	MarR-1lnwH05	H:35-93
1f	MarR-1lnwH06	H:35-93
1g	MarR-1lnwH07	H:35-93
1h	MarR-1lnwH08	H:35-93

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (MEXR_PSEAE | P52003)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0003700	transcription factor activity, sequence-specific DNA binding	Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
	GO:0044212	transcription regulatory region DNA binding	Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
biological process
	GO:0050709	negative regulation of protein secretion	Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.
	GO:0045892	negative regulation of transcription, DNA-templated	Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0034763	negative regulation of transmembrane transport	Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.

Asymmetric Unit
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	1lnw
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	MEXR_PSEAE \| P52003	:	3ech 3mex 4zzl

(no "Related Entries Specified in the PDB File" available for 1LNW)

Description

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Sites (0, 0)

SS Bonds (0, 0)

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