Chain A from PDB Type:PROTEIN Length:60
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:60
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
SCOP domains d1kq1a_ A: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1A00 A:6-65 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
1kq1 A 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
15 25 35 45 55 65
Chain B from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1b_ B: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1B00 B:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh..eeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 B 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain H from PDB Type:PROTEIN Length:66
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:66
10 20 30 40 50 60
A0A0H3JV59_S 1 MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1h_ H: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1H00 H:1-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------ Pfam domains
Sec.struct. author .....hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------ Transcript
1kq1 H 1 MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
10 20 30 40 50 60
Chain I from PDB Type:PROTEIN Length:60
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:60
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
SCOP domains d1kq1i_ I: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1I00 I:6-65 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
1kq1 I 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
15 25 35 45 55 65
Chain K from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1k_ K: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1K00 K:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 K 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain M from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1m_ M: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1M00 M:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 M 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain N from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1n_ N: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1N00 N:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.eeeeee....eeeeeeeee...eeeee....eeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 N 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain R from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1r_ R: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1R00 R:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 R 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain S from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1s_ S: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1S00 S:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhh.eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain T from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1t_ T: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1T00 T:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 T 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain W from PDB Type:PROTEIN Length:61
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:61
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
SCOP domains d1kq1w_ W: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1W00 W:6-66 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------- Transcript
1kq1 W 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTVE 66
15 25 35 45 55 65
Chain Y from PDB Type:PROTEIN Length:60
aligned with A0A0H3JV59_S | A0A0H3JV59 from UniProtKB/TrEMBL Length:77
Alignment length:60
15 25 35 45 55 65
A0A0H3JV59_S 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
SCOP domains d1kq1y_ Y: Pleiotropic translational regulator Hfq SCOP domains
CATH domains 1kq1Y00 Y:6-65 [code=2.30.30.100, no name defined] CATH domains
Pfam domains ------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeeee..eeeeee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------ Transcript
1kq1 Y 6 NIQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLNSQGKQHLIYKHAISTYTV 65
15 25 35 45 55 65
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |