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(-) Description

Title :  CRYSTAL STRUCTURE OF QUERCETIN 2,3-DIOXYGENASE
 
Authors :  F. Fusetti, K. H. Schroeter, R. A. Steiner, B. W. Dijkstra
Date :  24 Aug 01  (Deposition) - 22 May 02  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Dioxygenase, Cupin, Glycoprotein, Beta Sandwich, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Fusetti, K. H. Schroter, R. A. Steiner, P. I. Van Noort, T. Pijning, H. J. Rozeboom, K. H. Kalk, M. R. Egmond, B. W. Dijkstra
Crystal Structure Of The Copper-Containing Quercetin 2, 3-Dioxygenase From Aspergillus Japonicus.
Structure V. 10 259 2002
PubMed-ID: 11839311  |  Reference-DOI: 10.1016/S0969-2126(02)00704-9

(-) Compounds

Molecule 1 - QUERCETIN 2,3-DIOXYGENASE
    Chains: A, B, C, D
    EC Number: 1.13.11.24
    Organism Scientific: ASPERGILLUS JAPONICUS
    Organism Taxid: 34381

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 66)

Asymmetric/Biological Unit (5, 66)
No.NameCountTypeFull Name
1BMA3Ligand/IonBETA-D-MANNOSE
2CU4Ligand/IonCOPPER (II) ION
3EDO32Ligand/Ion1,2-ETHANEDIOL
4MAN6Ligand/IonALPHA-D-MANNOSE
5NAG21Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (66, 66)

Asymmetric Unit (66, 66)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:108 , ASN A:109 , HOH A:2167 , HOH A:2245BINDING SITE FOR RESIDUE NAG A 501
02AC2SOFTWAREASN A:191 , NAG A:503 , HOH A:2154 , HOH A:2165 , HOH A:2330 , THR C:189BINDING SITE FOR RESIDUE NAG A 502
03AC3SOFTWARENAG A:502 , BMA A:604 , HOH A:2263 , HOH A:2349 , HOH A:2392 , GLN C:83 , THR C:187 , THR C:189 , HOH C:2116BINDING SITE FOR RESIDUE NAG A 503
04AC4SOFTWARENAG A:503 , MAN A:605 , MAN A:606 , HOH A:2349 , HOH A:2440 , HOH A:2479 , THR C:187BINDING SITE FOR RESIDUE BMA A 604
05AC5SOFTWAREBMA A:604 , MAN A:610BINDING SITE FOR RESIDUE MAN A 605
06AC6SOFTWAREBMA A:604 , MAN A:607 , HOH A:2121 , HOH A:2277 , HOH A:2333 , HOH A:2458 , THR C:184BINDING SITE FOR RESIDUE MAN A 606
07AC7SOFTWAREMAN A:606 , HOH A:2121 , HOH A:2263 , HOH A:2288 , HOH A:2349 , HOH A:2435 , LEU C:61 , THR C:187 , HOH C:2357BINDING SITE FOR RESIDUE MAN A 607
08AC8SOFTWAREGLU A:314 , MAN A:605 , HOH A:2404 , HOH A:2475BINDING SITE FOR RESIDUE MAN A 610
09AC9SOFTWAREASN A:248 , GLY A:272 , SER A:325 , GLY A:326 , HOH A:2342 , HOH A:2372BINDING SITE FOR RESIDUE NAG A 504
10BC1SOFTWAREASN A:142 , THR A:144 , HOH A:2385BINDING SITE FOR RESIDUE NAG A 505
11BC2SOFTWAREARG B:108 , ASN B:109 , HOH B:2162 , HOH B:2241BINDING SITE FOR RESIDUE NAG B 506
12BC3SOFTWAREVAL B:190 , ASN B:191 , NAG B:508 , HOH B:2243 , HOH B:2262BINDING SITE FOR RESIDUE NAG B 507
13BC4SOFTWARENAG B:507 , BMA B:608 , HOH B:2215 , HOH B:2352 , HOH B:2382BINDING SITE FOR RESIDUE NAG B 508
14BC5SOFTWARENAG B:508 , MAN B:609 , HOH B:2215 , HOH B:2363BINDING SITE FOR RESIDUE BMA B 608
15BC6SOFTWAREBMA B:608 , HOH B:2398 , HOH B:2417BINDING SITE FOR RESIDUE MAN B 609
16BC7SOFTWAREASN B:248 , GLY B:272 , SER B:325 , GLY B:326 , EDO B:2023 , HOH B:2192 , HOH B:2345BINDING SITE FOR RESIDUE NAG B 509
17BC8SOFTWAREARG B:26 , ASN B:142 , HOH B:2374 , ARG C:26 , NAG C:515BINDING SITE FOR RESIDUE NAG B 510
18BC9SOFTWAREARG C:108 , ASN C:109 , HOH C:2110 , HOH C:2230BINDING SITE FOR RESIDUE NAG C 511
19CC1SOFTWARETHR A:189 , VAL C:190 , ASN C:191 , NAG C:513 , HOH C:2084 , HOH C:2228 , HOH C:2316BINDING SITE FOR RESIDUE NAG C 512
20CC2SOFTWAREGLN A:83 , THR A:187 , THR A:189 , NAG C:512 , BMA C:601 , HOH C:2446 , HOH C:2468BINDING SITE FOR RESIDUE NAG C 513
21CC3SOFTWARETHR A:187 , NAG C:513 , MAN C:603 , HOH C:2446BINDING SITE FOR RESIDUE BMA C 601
22CC4SOFTWAREBMA C:601 , HOH C:2161 , HOH C:2325BINDING SITE FOR RESIDUE MAN C 603
23CC5SOFTWAREASN C:248 , GLY C:272 , SER C:325 , GLY C:326 , HOH C:2367BINDING SITE FOR RESIDUE NAG C 514
24CC6SOFTWAREARG B:26 , NAG B:510 , TYR C:137 , ASN C:142 , EDO C:2032 , HOH C:2174 , HOH C:2221BINDING SITE FOR RESIDUE NAG C 515
25CC7SOFTWAREARG D:108 , ASN D:109 , HOH D:2141 , HOH D:2236 , HOH D:2244 , HOH D:2245BINDING SITE FOR RESIDUE NAG D 516
26CC8SOFTWAREVAL D:190 , ASN D:191 , NAG D:518 , HOH D:2112 , HOH D:2303 , HOH D:2413BINDING SITE FOR RESIDUE NAG D 517
27CC9SOFTWARENAG D:517 , HOH D:2206 , HOH D:2375BINDING SITE FOR RESIDUE NAG D 518
28DC1SOFTWAREASN D:142 , THR D:144 , EDO D:2034 , HOH D:2162 , HOH D:2239 , HOH D:2314BINDING SITE FOR RESIDUE NAG D 519
29DC2SOFTWAREASN D:248 , GLY D:272 , SER D:325 , GLY D:326 , HOH D:2284 , HOH D:2454 , HOH D:2458BINDING SITE FOR RESIDUE NAG D 520
30DC3SOFTWAREASN A:90 , HOH A:2222 , HOH A:2419BINDING SITE FOR RESIDUE NAG A 521
31DC4SOFTWAREHIS A:66 , HIS A:68 , GLU A:73 , HIS A:112 , HOH A:2339BINDING SITE FOR RESIDUE CU A 401
32DC5SOFTWAREHIS B:66 , HIS B:68 , GLU B:73 , HIS B:112 , HOH B:2317BINDING SITE FOR RESIDUE CU B 402
33DC6SOFTWAREHIS C:66 , HIS C:68 , GLU C:73 , HIS C:112 , HOH C:2321BINDING SITE FOR RESIDUE CU C 403
34DC7SOFTWAREHIS D:66 , HIS D:68 , GLU D:73 , HIS D:112 , HOH D:2318BINDING SITE FOR RESIDUE CU D 404
35DC8SOFTWARETYR A:72 , ARG A:108 , ALA A:211 , GLN A:243 , ALA A:244 , HOH A:2046 , HOH A:2340BINDING SITE FOR RESIDUE EDO A 2001
36DC9SOFTWARETYR B:72 , ARG B:108 , GLN B:243 , GLN B:245 , HOH B:2195BINDING SITE FOR RESIDUE EDO B 2002
37EC1SOFTWARETYR C:72 , ARG C:108 , GLN C:243 , GLN C:245 , HOH C:2184 , HOH C:2431BINDING SITE FOR RESIDUE EDO C 2003
38EC2SOFTWARETYR D:72 , ARG D:108 , GLN D:243 , ALA D:244 , GLN D:245 , HOH D:2064BINDING SITE FOR RESIDUE EDO D 2004
39EC3SOFTWARETHR C:92 , ARG C:186 , PRO C:195 , GLN C:286 , ALA C:291 , ALA C:292 , HOH C:2159 , HOH C:2280BINDING SITE FOR RESIDUE EDO C 2005
40EC4SOFTWAREGLN C:286 , GLY C:288 , GLU C:308 , HOH C:2172 , HOH C:2268BINDING SITE FOR RESIDUE EDO C 2006
41EC5SOFTWARELYS A:224 , TYR A:225 , GLU A:340 , TRP A:341 , HOH A:2197 , HOH A:2334BINDING SITE FOR RESIDUE EDO A 2007
42EC6SOFTWAREGLU B:73 , ASN B:74 , PHE B:75 , MET B:123 , GLY B:125 , HOH B:2079BINDING SITE FOR RESIDUE EDO B 2008
43EC7SOFTWAREVAL A:63 , HIS A:66 , LEU A:135 , EDO A:2028 , HOH A:2339 , HOH A:2434BINDING SITE FOR RESIDUE EDO A 2009
44EC8SOFTWARETHR B:92 , ASN B:197 , HOH B:2186 , HOH B:2397BINDING SITE FOR RESIDUE EDO B 2011
45EC9SOFTWARESER D:228 , GLY D:231 , TRP D:350 , HOH D:2269BINDING SITE FOR RESIDUE EDO D 2012
46FC1SOFTWARESER B:228 , GLN B:229 , GLY B:231 , PRO B:260BINDING SITE FOR RESIDUE EDO B 2013
47FC2SOFTWARESER C:228 , GLY C:231 , TYR C:232 , TRP C:350BINDING SITE FOR RESIDUE EDO C 2014
48FC3SOFTWARESER A:228 , GLY A:231 , TRP A:350BINDING SITE FOR RESIDUE EDO A 2015
49FC4SOFTWAREGLY B:220 , TRP B:221 , LYS B:224 , SER B:342 , HOH B:2436BINDING SITE FOR RESIDUE EDO B 2016
50FC5SOFTWAREGLU A:280 , HIS C:21 , GLN C:279 , SER C:297 , GLY C:298BINDING SITE FOR RESIDUE EDO C 2017
51FC6SOFTWARETYR D:230 , GLN D:233 , MET D:256 , SER D:257 , THR D:258 , THR D:259 , TYR D:312 , SER D:313BINDING SITE FOR RESIDUE EDO D 2018
52FC7SOFTWARETRP A:341 , SER A:342 , SER A:343 , SER C:154BINDING SITE FOR RESIDUE EDO A 2020
53FC8SOFTWAREHIS B:21 , GLN B:279 , SER B:297 , GLY B:298BINDING SITE FOR RESIDUE EDO B 2021
54FC9SOFTWAREGLY A:281 , GLY A:296 , SER A:297 , HOH A:2075 , GLY C:281 , GLY C:296 , SER C:297BINDING SITE FOR RESIDUE EDO C 2022
55GC1SOFTWAREGLY B:326 , SER B:327 , ASP B:328 , NAG B:509 , HOH B:2090 , HOH B:2419BINDING SITE FOR RESIDUE EDO B 2023
56GC2SOFTWAREGLU A:339 , HOH A:2272 , HOH A:2483BINDING SITE FOR RESIDUE EDO A 2024
57GC3SOFTWAREHOH A:2218BINDING SITE FOR RESIDUE EDO A 2025
58GC4SOFTWARETYR A:232 , ASP A:349 , TRP A:350 , HOH A:2134 , HOH A:2272BINDING SITE FOR RESIDUE EDO A 2026
59GC5SOFTWARESER C:228 , GLU C:339 , HOH C:2267BINDING SITE FOR RESIDUE EDO C 2027
60GC6SOFTWARETYR A:35 , THR A:53 , GLU A:73 , PHE A:114 , MET A:123 , PHE A:136 , EDO A:2009 , HOH A:2264 , HOH A:2335BINDING SITE FOR RESIDUE EDO A 2028
61GC7SOFTWAREHOH A:2333 , ARG C:186 , THR C:187 , HOH C:2234BINDING SITE FOR RESIDUE EDO C 2029
62GC8SOFTWARETYR D:35 , GLY D:62 , LEU D:135 , PHE D:136BINDING SITE FOR RESIDUE EDO D 2030
63GC9SOFTWARETYR C:230 , TYR C:232 , GLN C:233 , SER C:257 , THR C:258 , THR C:259 , TYR C:312 , SER C:313BINDING SITE FOR RESIDUE EDO C 2031
64HC1SOFTWAREHIS C:24 , ARG C:26 , NAG C:515 , HOH C:2102 , HOH C:2433BINDING SITE FOR RESIDUE EDO C 2032
65HC2SOFTWARESER B:81 , SER B:99 , GLN B:117 , HOH B:2068 , HOH B:2183 , HOH B:2393BINDING SITE FOR RESIDUE EDO B 2033
66HC3SOFTWAREHIS D:24 , ASN D:142 , ALA D:143 , THR D:144 , NAG D:519 , HOH D:2314BINDING SITE FOR RESIDUE EDO D 2034

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1JUH)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Val A:128 -Pro A:129
2Ala A:194 -Pro A:195
3Val B:128 -Pro B:129
4Ala B:194 -Pro B:195
5Val C:128 -Pro C:129
6Ala C:194 -Pro C:195
7Val D:128 -Pro D:129
8Ala D:194 -Pro D:195

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1JUH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1JUH)

(-) Exons   (0, 0)

(no "Exon" information available for 1JUH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:334
 aligned with QDOI_ASPJA | Q7SIC2 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:348
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342        
           QDOI_ASPJA     3 SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
               SCOP domains d1juha_ A: Quercetin 2,3-dioxygenase                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1juhA01 A:3-145 Jelly Rolls                                                                                                                    ------------------------------------------------------------1juhA02 A:206-350 Jelly Rolls                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............eee........eee..eeeeeeehhhhhh...eeeeeee..........ee....eeeeeeee.eeeeeee......eeeeee...eeee....eeeeee....eeeeeeee....hhhhhhhhee............--------------hhhhhhhh.ee.............ee....................eee......eeee.....eeeeeeehhhhhh...eeeeeeee.................eeeeeee..eeeee.....eee....eeee.....eeeee....eeeeeeee...hhhhhhhhhheee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1juh A   3 SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPS--------------ISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152 |       -      |172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342        
                                                                                                                                                                                 154            169                                                                                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:339
 aligned with QDOI_ASPJA | Q7SIC2 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:348
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342        
           QDOI_ASPJA     3 SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
               SCOP domains d1juhb_ B: Quercetin 2,3-dioxygenase                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1juhB01 B:3-145 Jelly Rolls                                                                                                                    ------------------------------------------------------------1juhB02 B:206-350 Jelly Rolls                                                                                                                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee.........eee........eee..eeeeeeehhhhhh...eeeeeee..........ee....eeeeeeee.eeeeeee......eeeeee...eeee....eeeeee....eeeeeeee....hhhhhhhhee............---------.hhhhhhhhhh...ee.............ee....................eee......eeee.....eeeeeeehhhhhh...eeeeeeee.................eeeeeee..eeeee.....eee....eeee.....eeeee....eeeeeeee...hhhhhhhhh.eee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1juh B   3 SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPS---------PDSSTISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152 |       - |     172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342        
                                                                                                                                                                                 154       164                                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:334
 aligned with QDOI_ASPJA | Q7SIC2 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:346
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344      
           QDOI_ASPJA     5 LIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
               SCOP domains d1juhc_ C: Quercetin 2,3-dioxygenase                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 1juhC01 C:5-145 Jelly Rolls                                                                                                                  ------------------------------------------------------------1juhC02 C:206-350 Jelly Rolls                                                                                                                     CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.........eee........eee..eeeeeeehhhhhh...eeeeeee..........ee....eeeeeeee.eeeeeee......eeeeee...eeee....eeeeee....eeeeeeee....hhhhhhhhee............------------hhhhhhhh...ee.............ee....................eee......eeee.....eeeeeeehhhhhh...eeeeeeee.................eeeeeee..eeeee.....eee....eeee.....eeeee....eeeeeeee...hhhhhhhhh.eee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1juh C   5 LIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPS------------STISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154         -  |    174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344      
                                                                                                                                                                               154          167                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:330
 aligned with QDOI_ASPJA | Q7SIC2 from UniProtKB/Swiss-Prot  Length:350

    Alignment length:346
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344      
           QDOI_ASPJA     5 LIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
               SCOP domains d1juhd_ D: Quercetin 2,3-dioxygenase                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 1juhD01 D:5-145 Jelly Rolls                                                                                                                  ------------------------------------------------------------1juhD02 D:206-350 Jelly Rolls                                                                                                                     CATH domains
           Pfam domains (1) -------------------------------------------------Cupin_2-1juhD01 D:54-129                                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------Cupin_2-1juhD02 D:54-129                                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------Cupin_2-1juhD03 D:54-129                                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------Cupin_2-1juhD04 D:54-129                                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author ............eee........eee..eeeeeeehhhhhh...eeeeeee..........ee....eeeeeeee.eeeeeee......eeeeee...eeee....eeeeee....eeeeeeee....hhhhhhhhee...........----------------hhhhhhh.ee.............ee....................eee......eeee.....eeeeeeehhhhhh...eeeeeeee.................eeeeeee..eeeee.....eee....eeee.....eeeee....eeeeeeee...hhhhhhhhh.eee......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1juh D   5 LIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIP----------------STLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW 350
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144        |-         -     | 174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344      
                                                                                                                                                                              153              170
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 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Jelly Rolls (1293)
(-)
Homologous Superfamily: Jelly Rolls (177)
(-)
Aspergillus japonicus. Organism_taxid: 34381 (1)
1a1juhA02A:206-350
1b1juhB02B:206-350
1c1juhC02C:206-350
1d1juhD02D:206-350
1e1juhA01A:3-145
1f1juhB01B:3-145
1g1juhC01C:5-145
1h1juhD01D:5-145

(-) Pfam Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Clan: Cupin (179)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (QDOI_ASPJA | Q7SIC2)
molecular function
    GO:0051213    dioxygenase activity    Catalysis of an oxidation-reduction (redox) reaction in which both atoms of oxygen from one molecule of O2 are incorporated into the (reduced) product(s) of the reaction. The two atoms of oxygen may be distributed between two different products.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0008127    quercetin 2,3-dioxygenase activity    Catalysis of the reaction: H(+) + O(2) + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  1juh
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  1.13.11.24
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        QDOI_ASPJA | Q7SIC2: 1gqg 1gqh 1h1i 1h1m

(-) Related Entries Specified in the PDB File

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