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1JUH
Asym. Unit
Info
Asym.Unit (267 KB)
Biol.Unit 1 (257 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF QUERCETIN 2,3-DIOXYGENASE
Authors
:
F. Fusetti, K. H. Schroeter, R. A. Steiner, B. W. Dijkstra
Date
:
24 Aug 01 (Deposition) - 22 May 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Dioxygenase, Cupin, Glycoprotein, Beta Sandwich, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Fusetti, K. H. Schroter, R. A. Steiner, P. I. Van Noort, T. Pijning, H. J. Rozeboom, K. H. Kalk, M. R. Egmond, B. W. Dijkstra
Crystal Structure Of The Copper-Containing Quercetin 2, 3-Dioxygenase From Aspergillus Japonicus.
Structure V. 10 259 2002
[
close entry info
]
Hetero Components
(5, 66)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: 1,2-ETHANEDIOL (EDOa)
3aa: 1,2-ETHANEDIOL (EDOaa)
3ab: 1,2-ETHANEDIOL (EDOab)
3ac: 1,2-ETHANEDIOL (EDOac)
3ad: 1,2-ETHANEDIOL (EDOad)
3ae: 1,2-ETHANEDIOL (EDOae)
3af: 1,2-ETHANEDIOL (EDOaf)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
3h: 1,2-ETHANEDIOL (EDOh)
3i: 1,2-ETHANEDIOL (EDOi)
3j: 1,2-ETHANEDIOL (EDOj)
3k: 1,2-ETHANEDIOL (EDOk)
3l: 1,2-ETHANEDIOL (EDOl)
3m: 1,2-ETHANEDIOL (EDOm)
3n: 1,2-ETHANEDIOL (EDOn)
3o: 1,2-ETHANEDIOL (EDOo)
3p: 1,2-ETHANEDIOL (EDOp)
3q: 1,2-ETHANEDIOL (EDOq)
3r: 1,2-ETHANEDIOL (EDOr)
3s: 1,2-ETHANEDIOL (EDOs)
3t: 1,2-ETHANEDIOL (EDOt)
3u: 1,2-ETHANEDIOL (EDOu)
3v: 1,2-ETHANEDIOL (EDOv)
3w: 1,2-ETHANEDIOL (EDOw)
3x: 1,2-ETHANEDIOL (EDOx)
3y: 1,2-ETHANEDIOL (EDOy)
3z: 1,2-ETHANEDIOL (EDOz)
4a: ALPHA-D-MANNOSE (MANa)
4b: ALPHA-D-MANNOSE (MANb)
4c: ALPHA-D-MANNOSE (MANc)
4d: ALPHA-D-MANNOSE (MANd)
4e: ALPHA-D-MANNOSE (MANe)
4f: ALPHA-D-MANNOSE (MANf)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5i: N-ACETYL-D-GLUCOSAMINE (NAGi)
5j: N-ACETYL-D-GLUCOSAMINE (NAGj)
5k: N-ACETYL-D-GLUCOSAMINE (NAGk)
5l: N-ACETYL-D-GLUCOSAMINE (NAGl)
5m: N-ACETYL-D-GLUCOSAMINE (NAGm)
5n: N-ACETYL-D-GLUCOSAMINE (NAGn)
5o: N-ACETYL-D-GLUCOSAMINE (NAGo)
5p: N-ACETYL-D-GLUCOSAMINE (NAGp)
5q: N-ACETYL-D-GLUCOSAMINE (NAGq)
5r: N-ACETYL-D-GLUCOSAMINE (NAGr)
5s: N-ACETYL-D-GLUCOSAMINE (NAGs)
5t: N-ACETYL-D-GLUCOSAMINE (NAGt)
5u: N-ACETYL-D-GLUCOSAMINE (NAGu)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
CU
4
Ligand/Ion
COPPER (II) ION
3
EDO
32
Ligand/Ion
1,2-ETHANEDIOL
4
MAN
6
Ligand/Ion
ALPHA-D-MANNOSE
5
NAG
21
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(66, 66)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:108 , ASN A:109 , HOH A:2167 , HOH A:2245
BINDING SITE FOR RESIDUE NAG A 501
02
AC2
SOFTWARE
ASN A:191 , NAG A:503 , HOH A:2154 , HOH A:2165 , HOH A:2330 , THR C:189
BINDING SITE FOR RESIDUE NAG A 502
03
AC3
SOFTWARE
NAG A:502 , BMA A:604 , HOH A:2263 , HOH A:2349 , HOH A:2392 , GLN C:83 , THR C:187 , THR C:189 , HOH C:2116
BINDING SITE FOR RESIDUE NAG A 503
04
AC4
SOFTWARE
NAG A:503 , MAN A:605 , MAN A:606 , HOH A:2349 , HOH A:2440 , HOH A:2479 , THR C:187
BINDING SITE FOR RESIDUE BMA A 604
05
AC5
SOFTWARE
BMA A:604 , MAN A:610
BINDING SITE FOR RESIDUE MAN A 605
06
AC6
SOFTWARE
BMA A:604 , MAN A:607 , HOH A:2121 , HOH A:2277 , HOH A:2333 , HOH A:2458 , THR C:184
BINDING SITE FOR RESIDUE MAN A 606
07
AC7
SOFTWARE
MAN A:606 , HOH A:2121 , HOH A:2263 , HOH A:2288 , HOH A:2349 , HOH A:2435 , LEU C:61 , THR C:187 , HOH C:2357
BINDING SITE FOR RESIDUE MAN A 607
08
AC8
SOFTWARE
GLU A:314 , MAN A:605 , HOH A:2404 , HOH A:2475
BINDING SITE FOR RESIDUE MAN A 610
09
AC9
SOFTWARE
ASN A:248 , GLY A:272 , SER A:325 , GLY A:326 , HOH A:2342 , HOH A:2372
BINDING SITE FOR RESIDUE NAG A 504
10
BC1
SOFTWARE
ASN A:142 , THR A:144 , HOH A:2385
BINDING SITE FOR RESIDUE NAG A 505
11
BC2
SOFTWARE
ARG B:108 , ASN B:109 , HOH B:2162 , HOH B:2241
BINDING SITE FOR RESIDUE NAG B 506
12
BC3
SOFTWARE
VAL B:190 , ASN B:191 , NAG B:508 , HOH B:2243 , HOH B:2262
BINDING SITE FOR RESIDUE NAG B 507
13
BC4
SOFTWARE
NAG B:507 , BMA B:608 , HOH B:2215 , HOH B:2352 , HOH B:2382
BINDING SITE FOR RESIDUE NAG B 508
14
BC5
SOFTWARE
NAG B:508 , MAN B:609 , HOH B:2215 , HOH B:2363
BINDING SITE FOR RESIDUE BMA B 608
15
BC6
SOFTWARE
BMA B:608 , HOH B:2398 , HOH B:2417
BINDING SITE FOR RESIDUE MAN B 609
16
BC7
SOFTWARE
ASN B:248 , GLY B:272 , SER B:325 , GLY B:326 , EDO B:2023 , HOH B:2192 , HOH B:2345
BINDING SITE FOR RESIDUE NAG B 509
17
BC8
SOFTWARE
ARG B:26 , ASN B:142 , HOH B:2374 , ARG C:26 , NAG C:515
BINDING SITE FOR RESIDUE NAG B 510
18
BC9
SOFTWARE
ARG C:108 , ASN C:109 , HOH C:2110 , HOH C:2230
BINDING SITE FOR RESIDUE NAG C 511
19
CC1
SOFTWARE
THR A:189 , VAL C:190 , ASN C:191 , NAG C:513 , HOH C:2084 , HOH C:2228 , HOH C:2316
BINDING SITE FOR RESIDUE NAG C 512
20
CC2
SOFTWARE
GLN A:83 , THR A:187 , THR A:189 , NAG C:512 , BMA C:601 , HOH C:2446 , HOH C:2468
BINDING SITE FOR RESIDUE NAG C 513
21
CC3
SOFTWARE
THR A:187 , NAG C:513 , MAN C:603 , HOH C:2446
BINDING SITE FOR RESIDUE BMA C 601
22
CC4
SOFTWARE
BMA C:601 , HOH C:2161 , HOH C:2325
BINDING SITE FOR RESIDUE MAN C 603
23
CC5
SOFTWARE
ASN C:248 , GLY C:272 , SER C:325 , GLY C:326 , HOH C:2367
BINDING SITE FOR RESIDUE NAG C 514
24
CC6
SOFTWARE
ARG B:26 , NAG B:510 , TYR C:137 , ASN C:142 , EDO C:2032 , HOH C:2174 , HOH C:2221
BINDING SITE FOR RESIDUE NAG C 515
25
CC7
SOFTWARE
ARG D:108 , ASN D:109 , HOH D:2141 , HOH D:2236 , HOH D:2244 , HOH D:2245
BINDING SITE FOR RESIDUE NAG D 516
26
CC8
SOFTWARE
VAL D:190 , ASN D:191 , NAG D:518 , HOH D:2112 , HOH D:2303 , HOH D:2413
BINDING SITE FOR RESIDUE NAG D 517
27
CC9
SOFTWARE
NAG D:517 , HOH D:2206 , HOH D:2375
BINDING SITE FOR RESIDUE NAG D 518
28
DC1
SOFTWARE
ASN D:142 , THR D:144 , EDO D:2034 , HOH D:2162 , HOH D:2239 , HOH D:2314
BINDING SITE FOR RESIDUE NAG D 519
29
DC2
SOFTWARE
ASN D:248 , GLY D:272 , SER D:325 , GLY D:326 , HOH D:2284 , HOH D:2454 , HOH D:2458
BINDING SITE FOR RESIDUE NAG D 520
30
DC3
SOFTWARE
ASN A:90 , HOH A:2222 , HOH A:2419
BINDING SITE FOR RESIDUE NAG A 521
31
DC4
SOFTWARE
HIS A:66 , HIS A:68 , GLU A:73 , HIS A:112 , HOH A:2339
BINDING SITE FOR RESIDUE CU A 401
32
DC5
SOFTWARE
HIS B:66 , HIS B:68 , GLU B:73 , HIS B:112 , HOH B:2317
BINDING SITE FOR RESIDUE CU B 402
33
DC6
SOFTWARE
HIS C:66 , HIS C:68 , GLU C:73 , HIS C:112 , HOH C:2321
BINDING SITE FOR RESIDUE CU C 403
34
DC7
SOFTWARE
HIS D:66 , HIS D:68 , GLU D:73 , HIS D:112 , HOH D:2318
BINDING SITE FOR RESIDUE CU D 404
35
DC8
SOFTWARE
TYR A:72 , ARG A:108 , ALA A:211 , GLN A:243 , ALA A:244 , HOH A:2046 , HOH A:2340
BINDING SITE FOR RESIDUE EDO A 2001
36
DC9
SOFTWARE
TYR B:72 , ARG B:108 , GLN B:243 , GLN B:245 , HOH B:2195
BINDING SITE FOR RESIDUE EDO B 2002
37
EC1
SOFTWARE
TYR C:72 , ARG C:108 , GLN C:243 , GLN C:245 , HOH C:2184 , HOH C:2431
BINDING SITE FOR RESIDUE EDO C 2003
38
EC2
SOFTWARE
TYR D:72 , ARG D:108 , GLN D:243 , ALA D:244 , GLN D:245 , HOH D:2064
BINDING SITE FOR RESIDUE EDO D 2004
39
EC3
SOFTWARE
THR C:92 , ARG C:186 , PRO C:195 , GLN C:286 , ALA C:291 , ALA C:292 , HOH C:2159 , HOH C:2280
BINDING SITE FOR RESIDUE EDO C 2005
40
EC4
SOFTWARE
GLN C:286 , GLY C:288 , GLU C:308 , HOH C:2172 , HOH C:2268
BINDING SITE FOR RESIDUE EDO C 2006
41
EC5
SOFTWARE
LYS A:224 , TYR A:225 , GLU A:340 , TRP A:341 , HOH A:2197 , HOH A:2334
BINDING SITE FOR RESIDUE EDO A 2007
42
EC6
SOFTWARE
GLU B:73 , ASN B:74 , PHE B:75 , MET B:123 , GLY B:125 , HOH B:2079
BINDING SITE FOR RESIDUE EDO B 2008
43
EC7
SOFTWARE
VAL A:63 , HIS A:66 , LEU A:135 , EDO A:2028 , HOH A:2339 , HOH A:2434
BINDING SITE FOR RESIDUE EDO A 2009
44
EC8
SOFTWARE
THR B:92 , ASN B:197 , HOH B:2186 , HOH B:2397
BINDING SITE FOR RESIDUE EDO B 2011
45
EC9
SOFTWARE
SER D:228 , GLY D:231 , TRP D:350 , HOH D:2269
BINDING SITE FOR RESIDUE EDO D 2012
46
FC1
SOFTWARE
SER B:228 , GLN B:229 , GLY B:231 , PRO B:260
BINDING SITE FOR RESIDUE EDO B 2013
47
FC2
SOFTWARE
SER C:228 , GLY C:231 , TYR C:232 , TRP C:350
BINDING SITE FOR RESIDUE EDO C 2014
48
FC3
SOFTWARE
SER A:228 , GLY A:231 , TRP A:350
BINDING SITE FOR RESIDUE EDO A 2015
49
FC4
SOFTWARE
GLY B:220 , TRP B:221 , LYS B:224 , SER B:342 , HOH B:2436
BINDING SITE FOR RESIDUE EDO B 2016
50
FC5
SOFTWARE
GLU A:280 , HIS C:21 , GLN C:279 , SER C:297 , GLY C:298
BINDING SITE FOR RESIDUE EDO C 2017
51
FC6
SOFTWARE
TYR D:230 , GLN D:233 , MET D:256 , SER D:257 , THR D:258 , THR D:259 , TYR D:312 , SER D:313
BINDING SITE FOR RESIDUE EDO D 2018
52
FC7
SOFTWARE
TRP A:341 , SER A:342 , SER A:343 , SER C:154
BINDING SITE FOR RESIDUE EDO A 2020
53
FC8
SOFTWARE
HIS B:21 , GLN B:279 , SER B:297 , GLY B:298
BINDING SITE FOR RESIDUE EDO B 2021
54
FC9
SOFTWARE
GLY A:281 , GLY A:296 , SER A:297 , HOH A:2075 , GLY C:281 , GLY C:296 , SER C:297
BINDING SITE FOR RESIDUE EDO C 2022
55
GC1
SOFTWARE
GLY B:326 , SER B:327 , ASP B:328 , NAG B:509 , HOH B:2090 , HOH B:2419
BINDING SITE FOR RESIDUE EDO B 2023
56
GC2
SOFTWARE
GLU A:339 , HOH A:2272 , HOH A:2483
BINDING SITE FOR RESIDUE EDO A 2024
57
GC3
SOFTWARE
HOH A:2218
BINDING SITE FOR RESIDUE EDO A 2025
58
GC4
SOFTWARE
TYR A:232 , ASP A:349 , TRP A:350 , HOH A:2134 , HOH A:2272
BINDING SITE FOR RESIDUE EDO A 2026
59
GC5
SOFTWARE
SER C:228 , GLU C:339 , HOH C:2267
BINDING SITE FOR RESIDUE EDO C 2027
60
GC6
SOFTWARE
TYR A:35 , THR A:53 , GLU A:73 , PHE A:114 , MET A:123 , PHE A:136 , EDO A:2009 , HOH A:2264 , HOH A:2335
BINDING SITE FOR RESIDUE EDO A 2028
61
GC7
SOFTWARE
HOH A:2333 , ARG C:186 , THR C:187 , HOH C:2234
BINDING SITE FOR RESIDUE EDO C 2029
62
GC8
SOFTWARE
TYR D:35 , GLY D:62 , LEU D:135 , PHE D:136
BINDING SITE FOR RESIDUE EDO D 2030
63
GC9
SOFTWARE
TYR C:230 , TYR C:232 , GLN C:233 , SER C:257 , THR C:258 , THR C:259 , TYR C:312 , SER C:313
BINDING SITE FOR RESIDUE EDO C 2031
64
HC1
SOFTWARE
HIS C:24 , ARG C:26 , NAG C:515 , HOH C:2102 , HOH C:2433
BINDING SITE FOR RESIDUE EDO C 2032
65
HC2
SOFTWARE
SER B:81 , SER B:99 , GLN B:117 , HOH B:2068 , HOH B:2183 , HOH B:2393
BINDING SITE FOR RESIDUE EDO B 2033
66
HC3
SOFTWARE
HIS D:24 , ASN D:142 , ALA D:143 , THR D:144 , NAG D:519 , HOH D:2314
BINDING SITE FOR RESIDUE EDO D 2034
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1juha_ (A:)
1b: SCOP_d1juhb_ (B:)
1c: SCOP_d1juhc_ (C:)
1d: SCOP_d1juhd_ (D:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
RmlC-like cupins
(220)
Family
:
Quercetin 2,3-dioxygenase-like
(7)
Protein domain
:
Quercetin 2,3-dioxygenase
(5)
Aspergillus japonicus [TaxId: 34381]
(5)
1a
d1juha_
A:
1b
d1juhb_
B:
1c
d1juhc_
C:
1d
d1juhd_
D:
[
close SCOP info
]
CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1juhA02 (A:206-350)
1b: CATH_1juhB02 (B:206-350)
1c: CATH_1juhC02 (C:206-350)
1d: CATH_1juhD02 (D:206-350)
1e: CATH_1juhA01 (A:3-145)
1f: CATH_1juhB01 (B:3-145)
1g: CATH_1juhC01 (C:5-145)
1h: CATH_1juhD01 (D:5-145)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Jelly Rolls
(177)
Aspergillus japonicus. Organism_taxid: 34381
(1)
1a
1juhA02
A:206-350
1b
1juhB02
B:206-350
1c
1juhC02
C:206-350
1d
1juhD02
D:206-350
1e
1juhA01
A:3-145
1f
1juhB01
B:3-145
1g
1juhC01
C:5-145
1h
1juhD01
D:5-145
[
close CATH info
]
Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Cupin_2_1juhD01 (D:54-129)
1b: PFAM_Cupin_2_1juhD02 (D:54-129)
1c: PFAM_Cupin_2_1juhD03 (D:54-129)
1d: PFAM_Cupin_2_1juhD04 (D:54-129)
View:
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Cupin
(179)
Family
:
Cupin_2
(16)
Aspergillus japonicus
(1)
1a
Cupin_2-1juhD01
D:54-129
1b
Cupin_2-1juhD02
D:54-129
1c
Cupin_2-1juhD03
D:54-129
1d
Cupin_2-1juhD04
D:54-129
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Chain D
Asymmetric Unit 1
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Example Command
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (267 KB)
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Biol.Unit 1 (257 KB)
Header - Biol.Unit 1
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