Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Biol.Unit 1 - manually
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
collapse expand < >
Image Biol.Unit 1 - manually
Biol.Unit 1 - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)

(-) Description

Title :  STRUCTURES OF AROMATIC INHIBITORS OF INFLUENZA VIRUS NEURAMINIDASE
 
Authors :  M. J. Jedrzejas, M. Luo
Date :  12 Dec 94  (Deposition) - 31 Mar 95  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Hydrolase (O-Glycosyl) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. J. Jedrzejas, S. Singh, W. J. Brouillette, W. G. Laver, G. M. Air, M. Luo
Structures Of Aromatic Inhibitors Of Influenza Virus Neuraminidase.
Biochemistry V. 34 3144 1995
PubMed-ID: 7880809  |  Reference-DOI: 10.1021/BI00010A003
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - INFLUENZA A SUBTYPE N2 NEURAMINIDASE
    Chains: A, B
    EC Number: 3.2.1.18
    Engineered: YES
    Organism Scientific: INFLUENZA A VIRUS (STRAIN A/TOKYO/3/1967 H2N2)
    Organism Taxid: 380960
    Strain: A/TOKYO/3/1967 H2N2

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (8, 32)

Asymmetric Unit (8, 32)
No.NameCountTypeFull Name
1BMA4Ligand/IonBETA-D-MANNOSE
2CA2Ligand/IonCALCIUM ION
3FUC1Ligand/IonALPHA-L-FUCOSE
4FUL1Ligand/IonBETA-L-FUCOSE
5MAN6Ligand/IonALPHA-D-MANNOSE
6NAG14Ligand/IonN-ACETYL-D-GLUCOSAMINE
7NDG2Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
8ST32Ligand/Ion4-(ACETYLAMINO)-3-AMINO BENZOIC ACID
Biological Unit 1 (7, 60)
No.NameCountTypeFull Name
1BMA8Ligand/IonBETA-D-MANNOSE
2CA-1Ligand/IonCALCIUM ION
3FUC2Ligand/IonALPHA-L-FUCOSE
4FUL2Ligand/IonBETA-L-FUCOSE
5MAN12Ligand/IonALPHA-D-MANNOSE
6NAG28Ligand/IonN-ACETYL-D-GLUCOSAMINE
7NDG4Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
8ST34Ligand/Ion4-(ACETYLAMINO)-3-AMINO BENZOIC ACID

(-) Sites  (34, 34)

Asymmetric Unit (34, 34)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:83 , ASN A:86 , SER A:88 , NAG A:473 , NAG A:484 , NDG A:485BINDING SITE FOR RESIDUE NAG A 472
02AC2SOFTWAREGLU A:83 , NAG A:472BINDING SITE FOR RESIDUE NAG A 473
03AC3SOFTWAREASN A:146 , ASP A:147 , TRP A:437 , ILE A:469 , NAG A:475 , FUL A:477BINDING SITE FOR RESIDUE NAG A 474
04AC4SOFTWARENAG A:474 , BMA A:476 , FUL A:477BINDING SITE FOR RESIDUE NAG A 475
05AC5SOFTWARENAG A:475 , NAG A:479 , MAN B:481BINDING SITE FOR RESIDUE BMA A 476
06AC6SOFTWAREASP A:147 , NAG A:474 , NAG A:475 , MAN B:481 , MAN B:482BINDING SITE FOR RESIDUE FUL A 477
07AC7SOFTWAREASP A:197 , ASN A:200 , NAG A:479 , GLY B:454 , THR B:455BINDING SITE FOR RESIDUE NAG A 478
08AC8SOFTWAREBMA A:476 , NAG A:478 , BMA A:480 , THR B:455 , MAN B:481BINDING SITE FOR RESIDUE NAG A 479
09AC9SOFTWARENAG A:479 , MAN B:481 , MAN B:483BINDING SITE FOR RESIDUE BMA A 480
10BC1SOFTWAREBMA A:476 , FUL A:477 , NAG A:479 , BMA A:480 , MAN B:482BINDING SITE FOR RESIDUE MAN B 481
11BC2SOFTWAREFUL A:477 , ASN B:463 , MAN B:481BINDING SITE FOR RESIDUE MAN B 482
12BC3SOFTWAREBMA A:480 , ASP B:399 , SER B:400 , ASP B:401BINDING SITE FOR RESIDUE MAN B 483
13BC4SOFTWAREASN A:234 , TYR A:284 , PRO A:285 , NAG A:472 , NDG A:485BINDING SITE FOR RESIDUE NAG A 484
14BC5SOFTWARENAG A:472 , NAG A:484BINDING SITE FOR RESIDUE NDG A 485
15BC6SOFTWAREGLU B:83 , ASN B:86 , SER B:88 , NAG B:473 , NAG B:487 , NDG B:488BINDING SITE FOR RESIDUE NAG B 472
16BC7SOFTWAREGLU B:83 , NAG B:472BINDING SITE FOR RESIDUE NAG B 473
17BC8SOFTWAREASN B:146 , ASP B:147 , TRP B:437 , ILE B:469 , NAG B:475 , FUC B:477BINDING SITE FOR RESIDUE NAG B 474
18BC9SOFTWARENAG B:474 , BMA B:476 , FUC B:477BINDING SITE FOR RESIDUE NAG B 475
19CATAUTHORARG A:118 , GLU A:119 , ASP A:151 , ARG A:152 , TRP A:178 , ILE A:222 , ARG A:224 , GLU A:276 , ARG A:292 , ARG A:371 , TYR A:406SUBSTRATE (SIALIC ACID) BINDING RESIDUES IN CATALYTIC SITE
20CC1SOFTWARENAG B:475BINDING SITE FOR RESIDUE BMA B 476
21CC2SOFTWAREASP B:147 , NAG B:474 , NAG B:475BINDING SITE FOR RESIDUE FUC B 477
22CC3SOFTWAREGLY A:454 , THR A:455 , ASP B:197 , ASN B:200 , NAG B:479BINDING SITE FOR RESIDUE NAG B 478
23CC4SOFTWARETHR A:455 , NAG B:478 , BMA B:480 , MAN B:484BINDING SITE FOR RESIDUE NAG B 479
24CC5SOFTWARENAG B:479 , MAN B:484 , MAN B:486BINDING SITE FOR RESIDUE BMA B 480
25CC6SOFTWARENAG B:479 , BMA B:480 , MAN B:485BINDING SITE FOR RESIDUE MAN B 484
26CC7SOFTWAREMAN B:484BINDING SITE FOR RESIDUE MAN B 485
27CC8SOFTWAREASP A:399 , SER A:400 , ASP A:401 , BMA B:480BINDING SITE FOR RESIDUE MAN B 486
28CC9SOFTWAREASN B:234 , TYR B:284 , PRO B:285 , NAG B:472 , NDG B:488BINDING SITE FOR RESIDUE NAG B 487
29CT2UNKNOWNARG B:118 , GLU B:119 , ASP B:151 , ARG B:152 , TRP B:178 , ILE B:222 , ARG B:224 , GLU B:276 , ARG B:292 , ARG B:371 , TYR B:406NULL
30DC1SOFTWARENAG B:472 , NAG B:487BINDING SITE FOR RESIDUE NDG B 488
31DC2SOFTWAREASP A:293 , GLY A:297 , ASP A:324 , GLY A:345 , THR A:346 , GLN A:347BINDING SITE FOR RESIDUE CA A 470
32DC3SOFTWAREASP B:293 , GLY B:297 , ASP B:324 , GLY B:345 , THR B:346 , GLN B:347BINDING SITE FOR RESIDUE CA B 470
33DC4SOFTWAREARG A:118 , ASP A:151 , ARG A:152 , TRP A:178 , ARG A:292 , ARG A:371 , TYR A:406BINDING SITE FOR RESIDUE ST3 A 471
34DC5SOFTWAREARG B:118 , ASP B:151 , ARG B:152 , TRP B:178 , ARG B:292 , ARG B:371 , TYR B:406BINDING SITE FOR RESIDUE ST3 B 471

(-) SS Bonds  (18, 18)

Asymmetric Unit
No.Residues
1A:92 -A:417
2A:124 -A:129
3A:175 -A:193
4A:183 -A:230
5A:232 -A:237
6A:278 -A:291
7A:280 -A:289
8A:318 -A:337
9A:421 -A:447
10B:92 -B:417
11B:124 -B:129
12B:175 -B:193
13B:183 -B:230
14B:232 -B:237
15B:278 -B:291
16B:280 -B:289
17B:318 -B:337
18B:421 -B:447

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Thr A:325 -Pro A:326
2Thr B:325 -Pro B:326

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1IVE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1IVE)

(-) Exons   (0, 0)

(no "Exon" information available for 1IVE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:388
 aligned with NRAM_I67A0 | P06820 from UniProtKB/Swiss-Prot  Length:469

    Alignment length:388
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461        
           NRAM_I67A0    82 VEYRNWSKPQCQITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPVKCYQFALGQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYDGRLVDSIGSWSQNILRTQESECVCINGTCTVVMTDGSASGRADTRILFIEEGKIVHISPLAGSAQHVEECSCYPRYPGVRCICRDNWKGSNRPVVDINMEDYSIDSSYVCSGLVGDTPRNDDRSSNSNCRNPNNERGTQGVKGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIVDSDNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETRVWWTSNSIVVFCGTSGTYGTGSWPDGANINFMPI 469
               SCOP domains d1ivea_ A: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1iveA00 A:82-469  [code=2.120.10.10, no name defined]                                                                                                                                                                                                                                                                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeee..hhhhhhh.........eeee....eeeeeeee......hhh..........eeeeeee.................eeeee....eeeeeee......eeeeee..eeeeeee..............eee..eeeeeeeee.....eeeeeeeee..eeeeeee...........eee....eeeee..........eeeeee.....eeeee....................................eeee..eeeeee.........eeeeeee.........eee..eeee........eeeeeee....eeeeeeeeeeee.........eeeeeeeeeee..............hhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ive A  82 VEYRNWSKPQCQITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPVKCYQFALGQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYDGRLVDSIGSWSQNILRTQESECVCINGTCTVVMTDGSASGRADTRILFIEEGKIVHISPLAGSAQHVEECSCYPRYPGVRCICRDNWKGSNRPVVDINMEDYSIDSSYVCSGLVGDTPRNDDRSSNSNCRDPNNERGTQGVKGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIVDSDNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETRVWWTSNSIVVFCGTSGTYGTGSWPDGANINFMPI 469
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461        


Chain B from PDB  Type:PROTEIN  Length:388
 aligned with NRAM_I67A0 | P06820 from UniProtKB/Swiss-Prot  Length:469

    Alignment length:388
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461        
           NRAM_I67A0    82 VEYRNWSKPQCQITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPVKCYQFALGQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYDGRLVDSIGSWSQNILRTQESECVCINGTCTVVMTDGSASGRADTRILFIEEGKIVHISPLAGSAQHVEECSCYPRYPGVRCICRDNWKGSNRPVVDINMEDYSIDSSYVCSGLVGDTPRNDDRSSNSNCRNPNNERGTQGVKGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIVDSDNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETRVWWTSNSIVVFCGTSGTYGTGSWPDGANINFMPI 469
               SCOP domains d1iveb_ B: Influenza neuraminidase                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1iveB00 B:82-469  [code=2.120.10.10, no name defined]                                                                                                                                                                                                                                                                                                                                                CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeee..hhhhhhh.........eeee....eeeeeeee......hhh..........eeeeeee.................eeeee....eeeeeee......eeeeee..eeeeeee..............eee..eeeeeeeee.....eeeeeeeee..eeeeeee...........eee....eeeee..........eeeeee.....eeeee....................................eeee..eeeeee.........eeeeeee.........eee..eeee........eeeeeee....eeeeeeeeeeee.........eeeeeeeeeee..............hhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ive B  82 VEYRNWSKPQCQITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPVKCYQFALGQGTTLDNKHSNDTVHDRIPHRTLLMNELGVPFHLGTRQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYDGRLVDSIGSWSQNILRTQESECVCINGTCTVVMTDGSASGRADTRILFIEEGKIVHISPLAGSAQHVEECSCYPRYPGVRCICRDNWKGSNRPVVDINMEDYSIDSSYVCSGLVGDTPRNDDRSSNSNCRDPNNERGTQGVKGWAFDNGNDLWMGRTISKDLRSGYETFKVIGGWSTPNSKSQINRQVIVDSDNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETRVWWTSNSIVVFCGTSGTYGTGSWPDGANINFMPI 469
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1IVE)

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (NRAM_I67A0 | P06820)
molecular function
    GO:0052794    exo-alpha-(2->3)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0052795    exo-alpha-(2->6)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->6)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0052796    exo-alpha-(2->8)-sialidase activity    Catalysis of the hydrolysis of alpha-(2->8)-glycosidic linkages of terminal sialic residues in substrates.
    GO:0004308    exo-alpha-sialidase activity    Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0033644    host cell membrane    Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0020002    host cell plasma membrane    The plasma membrane surrounding a host cell.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.
    GO:0055036    virion membrane    The lipid bilayer surrounding a virion.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BMA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FUC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FUL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MAN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NDG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ST3  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CAT  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    CT2  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Thr A:325 - Pro A:326   [ RasMol ]  
    Thr B:325 - Pro B:326   [ RasMol ]  
 
Biological Unit
  Complete Structure
    Biological Unit 1  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1ive
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  NRAM_I67A0 | P06820
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.18
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  NRAM_I67A0 | P06820
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NRAM_I67A0 | P06820: 1ing 1inh 1inw 1inx 1ivc 1ivd 1ivf 1ivg 1nn2 2bat

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1IVE)