Chain A from PDB Type:PROTEIN Length:206
aligned with RISA_ECOLI | P0AFU8 from UniProtKB/Swiss-Prot Length:213
Alignment length:206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_ECOLI 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
SCOP domains d1i8da1 A:1-93 Riboflavin synthase d1i8da2 A:94-206 Riboflavin synthase SCOP domains
CATH domains 1i8dA01 A:1-89 [code=2.40.30.20, no name defined] ------------1i8dA02 A:102-206 [code=2.40.30.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeee...eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeeehhhhhhhhhhhh....eeeeee..................eeeeeeeeeee..eeeeeeee.hhhhhhhh....eeee..eeee.......eeeeeehhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) LUMAZINE_BIND PDB: A:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: A:98-195 UniProt: 98-195 ----------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d A 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain A from PDB Type:PROTEIN Length:206
aligned with RISA_SHIFL | P0AFU9 from UniProtKB/Swiss-Prot Length:213
Alignment length:206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_SHIFL 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
SCOP domains d1i8da1 A:1-93 Riboflavin synthase d1i8da2 A:94-206 Riboflavin synthase SCOP domains
CATH domains 1i8dA01 A:1-89 [code=2.40.30.20, no name defined] ------------1i8dA02 A:102-206 [code=2.40.30.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeee...eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeeehhhhhhhhhhhh....eeeeee..................eeeeeeeeeee..eeeeeeee.hhhhhhhh....eeee..eeee.......eeeeeehhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE LUMAZINE_BIND PDB: A:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: A:98-195 UniProt: 98-195 ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d A 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain B from PDB Type:PROTEIN Length:201
aligned with RISA_ECOLI | P0AFU8 from UniProtKB/Swiss-Prot Length:213
Alignment length:206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_ECOLI 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
SCOP domains d1i8db1 B:1-93 Riboflavin synthase d1i8db2 B:94-206 Rib oflavin synthase SCOP domains
CATH domains 1i8dB01 B:1-89 [code=2.40.30.20, no name defined] ------------1i8dB02 B:10 2-205 [code=2.40.30.20, no name defined] - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeee...eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeeehhhhhhhhhhhh....eeeeee..................eeeeeeee.-----.eeeeee.hhhhhhhh....eeee..eeeeeeee...eeeee.hhhhhh..hhhhh....eeeeeehhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) LUMAZINE_BIND PDB: B:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: B:98-195 UniProt: 98-195 ----------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d B 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKIL-----RQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
10 20 30 40 50 60 70 80 90 100 110 | 120 130 140 150 160 170 180 190 200
113 119
Chain B from PDB Type:PROTEIN Length:201
aligned with RISA_SHIFL | P0AFU9 from UniProtKB/Swiss-Prot Length:213
Alignment length:206
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_SHIFL 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
SCOP domains d1i8db1 B:1-93 Riboflavin synthase d1i8db2 B:94-206 Rib oflavin synthase SCOP domains
CATH domains 1i8dB01 B:1-89 [code=2.40.30.20, no name defined] ------------1i8dB02 B:10 2-205 [code=2.40.30.20, no name defined] - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeee...eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeeehhhhhhhhhhhh....eeeeee..................eeeeeeee.-----.eeeeee.hhhhhhhh....eeee..eeeeeeee...eeeee.hhhhhh..hhhhh....eeeeeehhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE LUMAZINE_BIND PDB: B:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: B:98-195 UniProt: 98-195 ----------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d B 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKIL-----RQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAM 206
10 20 30 40 50 60 70 80 90 100 110 | 120 130 140 150 160 170 180 190 200
113 119
Chain C from PDB Type:PROTEIN Length:185
aligned with RISA_ECOLI | P0AFU8 from UniProtKB/Swiss-Prot Length:213
Alignment length:201
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_ECOLI 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAA 201
SCOP domains d1i8dc1 C:1-90 Riboflavin synthase d1i8dc2 C:97-2 01 Riboflavin synthase SCOP domains
CATH domains 1i8dC01 C:1-89 [code=2.40.30.20, no name defined] - -----1i8dC02 C :102-199 [code=2.40.30.20, no name defined] -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeeee..eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeehhhhhhhhhhhhh....eeeeee....------........eeeee.----------.eeee.hhhhhhhh....eeee..eeeeeeee...eeee..hhhhhhhh.........eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) LUMAZINE_BIND PDB: C:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: C:98-195 UniProt: 98-195 ------ PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d C 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKF------HLMSGHIMTTAEVA----------IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAA 201
10 20 30 40 50 60 70 80 90 |100 110 -| 130 140 150 160 170 180 190 200
90 97 110 121
Chain C from PDB Type:PROTEIN Length:185
aligned with RISA_SHIFL | P0AFU9 from UniProtKB/Swiss-Prot Length:213
Alignment length:201
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
RISA_SHIFL 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAA 201
SCOP domains d1i8dc1 C:1-90 Riboflavin synthase d1i8dc2 C:97-2 01 Riboflavin synthase SCOP domains
CATH domains 1i8dC01 C:1-89 [code=2.40.30.20, no name defined] - -----1i8dC02 C :102-199 [code=2.40.30.20, no name defined] -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeeeeeee..eeeeeee.hhhhh.......eeee..eeeeeeeee..eeeeeehhhhhhhhhhhhh....eeeeee....------........eeeee.----------.eeee.hhhhhhhh....eeee..eeeeeeee...eeee..hhhhhhhh.........eeeee.hhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE LUMAZINE_BIND PDB: C:1-97 UniProt: 1-97 LUMAZINE_BIND PDB: C:98-195 UniProt: 98-195 ------ PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1i8d C 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKF------HLMSGHIMTTAEVA----------IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAA 201
10 20 30 40 50 60 70 80 90 |100 110 -| 130 140 150 160 170 180 190 200
90 97 110 121
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |