1JGM - JenaLib

Asymmetric Unit (36, 36)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	EDO A:8 , HIS A:55 , HIS A:57 , KCX A:169 , ASP A:301 , HOH A:590	BINDING SITE FOR RESIDUE CD A 1
02	AC2	SOFTWARE	KCX A:169 , HIS A:201 , HIS A:230 , HOH A:590 , HOH A:646 , HOH A:699	BINDING SITE FOR RESIDUE CD A 2
03	AC3	SOFTWARE	EDO B:7 , HIS B:55 , HIS B:57 , KCX B:169 , ASP B:301 , HOH B:721	BINDING SITE FOR RESIDUE CD B 3
04	AC4	SOFTWARE	KCX B:169 , HIS B:201 , HIS B:230 , HOH B:606 , HOH B:681 , HOH B:721	BINDING SITE FOR RESIDUE CD B 4
05	AC5	SOFTWARE	ASN A:38 , ILE A:154 , HOH A:371 , HOH A:376 , HOH A:557 , HOH A:615	BINDING SITE FOR RESIDUE NA A 5
06	AC6	SOFTWARE	ASN B:38 , ILE B:154 , HOH B:391 , HOH B:559 , HOH B:566 , HOH B:593	BINDING SITE FOR RESIDUE NA B 6
07	AC7	SOFTWARE	CD B:3 , EDO B:20 , HIS B:57 , TRP B:131 , KCX B:169 , PHE B:306 , SER B:308 , EDO B:368 , HOH B:606 , HOH B:721	BINDING SITE FOR RESIDUE EDO B 7
08	AC8	SOFTWARE	CD A:1 , EDO A:22 , HIS A:57 , TRP A:131 , KCX A:169 , PHE A:306 , HOH A:648 , HOH A:699	BINDING SITE FOR RESIDUE EDO A 8
09	AC9	SOFTWARE	ARG A:91 , ARG B:189 , HOH B:481 , HOH B:567 , HOH B:700	BINDING SITE FOR RESIDUE EDO B 9
10	BC1	SOFTWARE	HOH A:469 , HOH A:568 , HOH A:577 , HOH A:602	BINDING SITE FOR RESIDUE EDO A 10
11	BC2	SOFTWARE	VAL A:84 , GLU A:115 , ALA A:119 , HOH A:430 , HOH A:595	BINDING SITE FOR RESIDUE EDO A 11
12	BC3	SOFTWARE	EDO A:13 , THR A:147 , ARG A:189 , HOH A:487 , HOH A:554 , HOH A:607 , ARG B:91	BINDING SITE FOR RESIDUE EDO A 12
13	BC4	SOFTWARE	EDO A:12 , HOH A:607 , ARG B:91 , ASP B:121	BINDING SITE FOR RESIDUE EDO A 13
14	BC5	SOFTWARE	EDO B:24 , ARG B:76 , LYS B:77 , GLU B:115 , HOH B:424 , HOH B:610	BINDING SITE FOR RESIDUE EDO B 14
15	BC6	SOFTWARE	GLY B:305 , PHE B:306 , MET B:314 , HOH B:540 , HOH B:723	BINDING SITE FOR RESIDUE EDO B 15
16	BC7	SOFTWARE	PRO B:256 , VAL B:320 , PHE B:327 , HOH B:575	BINDING SITE FOR RESIDUE EDO B 16
17	BC8	SOFTWARE	ASP A:133 , PRO A:135 , HOH A:712 , ASP B:133 , PRO B:134 , PRO B:135 , HOH B:370 , HOH B:372	BINDING SITE FOR RESIDUE EDO B 17
18	BC9	SOFTWARE	HOH A:390	BINDING SITE FOR RESIDUE EDO A 18
19	CC1	SOFTWARE	PRO A:256 , TRP A:277 , VAL A:320 , PHE A:327 , HOH A:591	BINDING SITE FOR RESIDUE EDO A 19
20	CC2	SOFTWARE	EDO B:7 , HIS B:257 , ASP B:301 , HOH B:721 , HOH B:742	BINDING SITE FOR RESIDUE EDO B 20
21	CC3	SOFTWARE	ARG A:41 , PRO A:43 , GLU B:338 , HOH B:580	BINDING SITE FOR RESIDUE EDO A 21
22	CC4	SOFTWARE	EDO A:8 , PHE A:306 , SER A:308 , HOH A:597	BINDING SITE FOR RESIDUE EDO A 22
23	CC5	SOFTWARE	SER A:224 , ARG A:225 , LEU A:249 , ARG A:356 , PHE A:357 , HOH A:609	BINDING SITE FOR RESIDUE EDO A 23
24	CC6	SOFTWARE	EDO B:14 , ALA B:80 , GLU B:81 , GLU B:115 , HOH B:648	BINDING SITE FOR RESIDUE EDO B 24
25	CC7	SOFTWARE	ALA A:266 , SER A:269 , ALA A:270	BINDING SITE FOR RESIDUE EDO A 25
26	CC8	SOFTWARE	HOH A:586 , HOH A:671 , TYR B:156 , HOH B:466 , HOH B:656	BINDING SITE FOR RESIDUE EDO B 26
27	CC9	SOFTWARE	PHE A:73 , GLY A:74 , ALA A:78 , HOH A:589 , HOH A:629	BINDING SITE FOR RESIDUE EDO A 27
28	DC1	SOFTWARE	LYS A:285 , ILE A:288 , ASP A:289 , VAL A:341 , PRO A:342 , HOH A:523	BINDING SITE FOR RESIDUE EDO A 28
29	DC2	SOFTWARE	GLY A:305 , PHE A:306 , MET A:314 , HOH A:422 , HOH A:526	BINDING SITE FOR RESIDUE EDO A 29
30	DC3	SOFTWARE	ARG A:152 , TYR A:156 , GLU B:71 , HOH B:377 , HOH B:658	BINDING SITE FOR RESIDUE EDO B 366
31	DC4	SOFTWARE	ILE A:333 , ARG A:337 , GLN A:343 , HOH A:394 , TYR B:156 , HOH B:469 , HOH B:674	BINDING SITE FOR RESIDUE EDO B 367
32	DC5	SOFTWARE	THR A:173 , HOH A:605	BINDING SITE FOR RESIDUE EDO A 366
33	DC6	SOFTWARE	EDO B:7 , SER B:308 , TYR B:309	BINDING SITE FOR RESIDUE EDO B 368
34	DC7	SOFTWARE	LYS B:77 , MET B:293 , GLY B:348 , ASN B:353	BINDING SITE FOR RESIDUE PEL B 369
35	DC8	SOFTWARE	LYS A:77 , MET A:293 , THR A:345 , GLY A:348 , ILE A:349 , ASN A:353	BINDING SITE FOR RESIDUE PEL A 367
36	DC9	SOFTWARE	ARG A:88 , ARG A:89 , HOH A:580 , LEU B:362 , ARG B:363	BINDING SITE FOR RESIDUE PEL A 368

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:333
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:333
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362   
            OPD_BREDI    33 TGDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRAS 365
               SCOP domains d1jgma_ A: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1jgmA00 A:33-365 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.hhh..eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhh.eee.........hhhhhh.hhhhhhhhhhhhhhh...........eeee.....hhhhhhhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhh..eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --PHOSPHOTRIESTERASE_2  PDB: A:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                      -- PROSITE (1)
                PROSITE (2) -----------------PHOSPHOTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jgm A  33 TGDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRAS 365
                                    42        52        62        72        82        92       102       112       122       132       142       152       162      |172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362   
                                                                                                                                                                  169-KCX

Chain B from PDB  Type:PROTEIN  Length:332
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:332
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363  
            OPD_BREDI    34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRAS 365
               SCOP domains d1jgmb_ B: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 1jgmB00 B:34-365 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                  CATH domains
           Pfam domains (1) ----------PTE-1jgmB01 B:44-359                                                                                                                                                                                                                                                                                                        ------ Pfam domains (1)
           Pfam domains (2) ----------PTE-1jgmB02 B:44-359                                                                                                                                                                                                                                                                                                        ------ Pfam domains (2)
         Sec.struct. author ..eeee..eeee.hhhh.eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhh.eee.........hhhhhh.hhhhhhhhhhhhhhh...........eeee.....hhhhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhh..eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -PHOSPHOTRIESTERASE_2  PDB: B:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                      -- PROSITE (1)
                PROSITE (2) ----------------PHOSPHOTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1jgm B  34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRAS 365
                                    43        53        63        73        83        93       103       113       123       133       143       153       163     | 173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363  
                                                                                                                                                                 169-KCX

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (OPD_BREDI | P0A434)

molecular function
	GO:0004063	aryldialkylphosphatase activity	Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016788	hydrolase activity, acting on ester bonds	Catalysis of the hydrolysis of any ester bond.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0009056	catabolic process	The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.
	GO:0016311	dephosphorylation	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
cellular component
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1jgm)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 38)

Sites (36, 36)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (9, 9)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File