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(-) Description

Title :  STRUCTURE OF PHOSPHOTRIESTERASE MUTANT I106G/F132G/H257Y
 
Authors :  J. Kim, U. A. Ramagopal, P. Tsai, F. M. Raushel, S. C. Almo
Date :  04 Dec 06  (Deposition) - 18 Dec 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.64
Chains :  Asym. Unit :  A,B,C,P
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,P  (1x)
Keywords :  Metalloenzyme, Tim Barrel, Nerve Agents, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Kim, U. A. Ramagopal, P. Tsai, F. M. Raushel, S. C. Almo
Structure Of Phosphotriesterase Mutant I106G/F132G/H257Y
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PARATHION HYDROLASE
    Chains: A, B, C, P
    EC Number: 3.1.8.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: RESIDUES 34-364
    Gene: OPD
    Mutation: YES
    Organism Scientific: BREVUNDIMONAS DIMINUTA
    Organism Taxid: 293
    Synonym: PHOSPHOTRIESTERASE, PTE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCP
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 39)

Asymmetric Unit (5, 39)
No.NameCountTypeFull Name
1ACY3Ligand/IonACETIC ACID
2CAC4Ligand/IonCACODYLATE ION
3GOL5Ligand/IonGLYCEROL
4KCX4Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5ZN23Ligand/IonZINC ION
Biological Unit 1 (4, 7)
No.NameCountTypeFull Name
1ACY2Ligand/IonACETIC ACID
2CAC2Ligand/IonCACODYLATE ION
3GOL1Ligand/IonGLYCEROL
4KCX2Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (4, 9)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2CAC2Ligand/IonCACODYLATE ION
3GOL4Ligand/IonGLYCEROL
4KCX2Mod. Amino AcidLYSINE NZ-CARBOXYLIC ACID
5ZN-1Ligand/IonZINC ION

(-) Sites  (35, 35)

Asymmetric Unit (35, 35)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:55 , HIS A:57 , KCX A:169 , ASP A:301 , CAC A:4001BINDING SITE FOR RESIDUE ZN A 3001
02AC2SOFTWAREHIS P:55 , HIS P:57 , KCX P:169 , ASP P:301 , CAC P:4004BINDING SITE FOR RESIDUE ZN P 3002
03AC3SOFTWAREKCX A:169 , HIS A:201 , HIS A:230 , CAC A:4001BINDING SITE FOR RESIDUE ZN A 3003
04AC4SOFTWAREKCX P:169 , HIS P:201 , HIS P:230 , CAC P:4004BINDING SITE FOR RESIDUE ZN P 3004
05AC5SOFTWAREHIS B:55 , HIS B:57 , KCX B:169 , ASP B:301 , CAC B:4002BINDING SITE FOR RESIDUE ZN B 3005
06AC6SOFTWAREKCX B:169 , HIS B:201 , HIS B:230 , CAC B:4002BINDING SITE FOR RESIDUE ZN B 3006
07AC7SOFTWAREHIS C:55 , HIS C:57 , KCX C:169 , ASP C:301 , CAC C:4003BINDING SITE FOR RESIDUE ZN C 3007
08AC8SOFTWAREKCX C:169 , HIS C:201 , HIS C:230 , CAC C:4003BINDING SITE FOR RESIDUE ZN C 3008
09AC9SOFTWAREASP A:233 , HIS A:254 , ACY A:6003 , HOH A:6210 , HOH A:6223BINDING SITE FOR RESIDUE ZN A 3009
10BC1SOFTWAREASP B:233 , HIS B:254 , ACY B:6002 , HOH B:6139BINDING SITE FOR RESIDUE ZN B 3010
11BC2SOFTWAREASP P:233 , HIS P:254 , GOL P:5003 , HOH P:5139 , HOH P:5143BINDING SITE FOR RESIDUE ZN P 3011
12BC3SOFTWAREGLU P:48 , HIS P:123 , HOH P:5097 , HOH P:5192BINDING SITE FOR RESIDUE ZN P 3012
13BC4SOFTWAREGLU A:48 , HIS A:123BINDING SITE FOR RESIDUE ZN A 3013
14BC5SOFTWAREGLU B:48 , HIS B:123 , GOL B:5002 , HOH B:6265BINDING SITE FOR RESIDUE ZN B 3014
15BC6SOFTWAREGLU C:48 , HIS C:123 , GOL C:5004 , HOH C:6279BINDING SITE FOR RESIDUE ZN C 3015
16BC7SOFTWAREASP C:233 , HIS C:254 , ACY C:6001 , HOH C:6132 , HOH C:6201BINDING SITE FOR RESIDUE ZN C 3016
17BC8SOFTWAREASP B:160 , GLU C:344 , GOL C:5005 , HOH C:6133BINDING SITE FOR RESIDUE ZN C 3017
18BC9SOFTWAREGLU A:344 , ASP P:160BINDING SITE FOR RESIDUE ZN A 3018
19CC1SOFTWAREGLU B:344 , HOH B:6338 , ASP C:160BINDING SITE FOR RESIDUE ZN B 3019
20CC2SOFTWAREASP C:236 , SER C:238 , HOH C:6149BINDING SITE FOR RESIDUE ZN C 3020
21CC3SOFTWAREGLN P:343 , GLU P:344BINDING SITE FOR RESIDUE ZN P 3021
22CC4SOFTWAREASP P:121 , HOH P:5307BINDING SITE FOR RESIDUE ZN P 3022
23CC5SOFTWAREARG A:207 , ASP A:236 , SER A:238 , HOH A:6305BINDING SITE FOR RESIDUE ZN A 3024
24CC6SOFTWAREHIS A:55 , HIS A:57 , TRP A:131 , KCX A:169 , HIS A:201 , HIS A:230 , ASP A:301 , ZN A:3001 , ZN A:3003BINDING SITE FOR RESIDUE CAC A 4001
25CC7SOFTWAREHIS B:55 , HIS B:57 , TRP B:131 , KCX B:169 , HIS B:201 , HIS B:230 , ASP B:301 , ZN B:3005 , ZN B:3006 , ACY B:6002BINDING SITE FOR RESIDUE CAC B 4002
26CC8SOFTWAREHIS C:55 , HIS C:57 , TRP C:131 , KCX C:169 , HIS C:201 , HIS C:230 , ASP C:301 , ZN C:3007 , ZN C:3008BINDING SITE FOR RESIDUE CAC C 4003
27CC9SOFTWAREHIS P:55 , HIS P:57 , TRP P:131 , KCX P:169 , HIS P:201 , HIS P:230 , ASP P:301 , ZN P:3002 , ZN P:3004BINDING SITE FOR RESIDUE CAC P 4004
28DC1SOFTWAREGLY A:94 , ARG A:96 , HOH A:6111 , GLN P:155 , TYR P:156 , HOH P:5217BINDING SITE FOR RESIDUE GOL P 5001
29DC2SOFTWAREGLU B:48 , ASP B:121 , HIS B:123 , ZN B:3014 , HOH B:6138BINDING SITE FOR RESIDUE GOL B 5002
30DC3SOFTWAREHIS P:201 , HIS P:230 , ASP P:233 , HIS P:254 , TYR P:257 , LEU P:271 , ZN P:3011 , HOH P:5139 , HOH P:5186BINDING SITE FOR RESIDUE GOL P 5003
31DC4SOFTWAREGLU C:48 , ARG C:96 , ASP C:121 , HIS C:123 , ZN C:3015 , HOH C:6210BINDING SITE FOR RESIDUE GOL C 5004
32DC5SOFTWAREASP B:160 , THR B:161 , PRO C:342 , GLN C:343 , GLU C:344 , ZN C:3017 , HOH C:6133BINDING SITE FOR RESIDUE GOL C 5005
33DC6SOFTWAREHIS C:230 , ASP C:233 , HIS C:254 , LEU C:271 , ZN C:3016 , HOH C:6132 , HOH C:6223BINDING SITE FOR RESIDUE ACY C 6001
34DC7SOFTWAREHIS B:230 , ASP B:233 , HIS B:254 , LEU B:271 , ZN B:3010 , CAC B:4002 , HOH B:6139 , HOH B:6220BINDING SITE FOR RESIDUE ACY B 6002
35DC8SOFTWAREHIS A:230 , ASP A:233 , HIS A:254 , LEU A:271 , ZN A:3009 , HOH A:6129BINDING SITE FOR RESIDUE ACY A 6003

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2O4M)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2O4M)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2O4M)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PHOSPHOTRIESTERASE_2PS51347 Phosphotriesterase family profile.OPD_BREDI35-363
 
 
 		  4A:35-363
B:35-363
C:35-363
P:35-363
2PHOSPHOTRIESTERASE_1PS01322 Phosphotriesterase family signature 1.OPD_BREDI50-58
 
 
 		  4A:50-58
B:50-58
C:50-58
P:50-58
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PHOSPHOTRIESTERASE_2PS51347 Phosphotriesterase family profile.OPD_BREDI35-363
 
 
 		  2A:35-363
B:35-363
-
-
2PHOSPHOTRIESTERASE_1PS01322 Phosphotriesterase family signature 1.OPD_BREDI50-58
 
 
 		  2A:50-58
B:50-58
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PHOSPHOTRIESTERASE_2PS51347 Phosphotriesterase family profile.OPD_BREDI35-363
 
 
 		  2-
-
C:35-363
P:35-363
2PHOSPHOTRIESTERASE_1PS01322 Phosphotriesterase family signature 1.OPD_BREDI50-58
 
 
 		  2-
-
C:50-58
P:50-58

(-) Exons   (0, 0)

(no "Exon" information available for 2O4M)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:330
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:330
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363
            OPD_BREDI    34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLR 363
               SCOP domains d2o4ma_ A: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 2o4mA00 A:34-363 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee..eeee.hhhh.eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhh.eee.eee.....hhhhhh.hhhhhhhhhhhhhhh..........eeeee.....hhhhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhhh.eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -PHOSPHOTRIESTERASE_2  PDB: A:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                       PROSITE (1)
                PROSITE (2) ----------------PHOSPHOTR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o4m A  34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDGGRDVSLLAEVSRAADVHIVAATGLWGDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLR 363
                                    43        53        63        73        83        93       103       113       123       133       143       153       163     | 173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363
                                                                                                                                                                 169-KCX                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:331
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:331
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
            OPD_BREDI    34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
               SCOP domains d2o4mb_ B: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2o4mB00 B:34-364 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..eeee.hhh..eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhh.eee.eee.....hhhhhh.hhhhhhhhhhhhhhh..........eeeee.....hhhhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhh..eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -PHOSPHOTRIESTERASE_2  PDB: B:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                      - PROSITE (1)
                PROSITE (2) ----------------PHOSPHOTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o4m B  34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDGGRDVSLLAEVSRAADVHIVAATGLWGDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
                                    43        53        63        73        83        93       103       113       123       133       143       153       163     | 173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
                                                                                                                                                                 169-KCX                                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:331
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:331
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
            OPD_BREDI    34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
               SCOP domains d2o4mc_ C: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2o4mC00 C:34-364 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..eeeehhhhh.eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhh.eee.eee.....hhhhhh.hhhhhhhhhhhhhhh..........eeeee.....hhhhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhh..eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -PHOSPHOTRIESTERASE_2  PDB: C:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                      - PROSITE (1)
                PROSITE (2) ----------------PHOSPHOTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o4m C  34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDGGRDVSLLAEVSRAADVHIVAATGLWGDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
                                    43        53        63        73        83        93       103       113       123       133       143       153       163     | 173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
                                                                                                                                                                 169-KCX                                                                                                                                                                                               


Chain P from PDB  Type:PROTEIN  Length:331
 aligned with OPD_BREDI | P0A434 from UniProtKB/Swiss-Prot  Length:365

    Alignment length:331
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
            OPD_BREDI    34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
               SCOP domains d2o4mp_ P: Phosphotriesterase (parathion hydrolase, PTE)                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 2o4mP00 P:34-364 Metal-dependent hydrolases                                                                                                                                                                                                                                                                                                 CATH domains
           Pfam domains (1) ----------PTE-2o4mP01 P:44-359                                                                                                                                                                                                                                                                                                        ----- Pfam domains (1)
           Pfam domains (2) ----------PTE-2o4mP02 P:44-359                                                                                                                                                                                                                                                                                                        ----- Pfam domains (2)
           Pfam domains (3) ----------PTE-2o4mP03 P:44-359                                                                                                                                                                                                                                                                                                        ----- Pfam domains (3)
           Pfam domains (4) ----------PTE-2o4mP04 P:44-359                                                                                                                                                                                                                                                                                                        ----- Pfam domains (4)
         Sec.struct. author ..eeee..eeeehhhhh.eeeee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeee..hhhhh.hhhhhhhhhhhhh.eee.eee.....hhhhhh.hhhhhhhhhhhhhhh..........eeeee.....hhhhhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhhhh..hhh.eee.hhhhh.hhhhhhhhhhh..eeee............hhhhhhhhh..hhhhhhhhhhhhhhh.hhh.eee......ee.....hhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -PHOSPHOTRIESTERASE_2  PDB: P:35-363 UniProt: 35-363                                                                                                                                                                                                                                                                                      - PROSITE (1)
                PROSITE (2) ----------------PHOSPHOTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o4m P  34 GDRINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDGGRDVSLLAEVSRAADVHIVAATGLWGDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIkVATTGKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLSPTLRA 364
                                    43        53        63        73        83        93       103       113       123       133       143       153       163     | 173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363 
                                                                                                                                                                 169-KCX
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: Amidohydrolase (126)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,P   (OPD_BREDI | P0A434)
molecular function
    GO:0004063    aryldialkylphosphatase activity    Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016788    hydrolase activity, acting on ester bonds    Catalysis of the hydrolysis of any ester bond.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0009056    catabolic process    The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.
    GO:0016311    dephosphorylation    The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
cellular component
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        OPD_BREDI | P0A434: 1dpm 1eyw 1ez2 1hzy 1i0b 1i0d 1jgm 1psc 1pta 1qw7 2o4q 2ob3 2oql 3cak 3cs2 3e3h 3upm 3ur2 3ur5 3ura 3urb 3urn 3urq 4e3t 4gy0 4gy1 4zst 4zsu

(-) Related Entries Specified in the PDB File

2o4q STRUCTURE OF PHOSPHOTRIESTERASE MUTANT G60A