Chain A from PDB Type:PROTEIN Length:80
aligned with DBH_BACCA | P0A3H2 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCA 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huua_ A: HU protein SCOP domains
CATH domains 1huuA00 A:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee...----------.....eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------ PROSITE (2)
PROSITE (3) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu A 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAAR----------MEIPASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - 70 80 90
58 69
Chain A from PDB Type:PROTEIN Length:80
aligned with DBH_BACCL | P0A3H1 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCL 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huua_ A: HU protein SCOP domains
CATH domains 1huuA00 A:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee...----------.....eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu A 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAAR----------MEIPASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - 70 80 90
58 69
Chain A from PDB Type:PROTEIN Length:80
aligned with DBH_GEOSE | P0A3H0 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_GEOSE 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huua_ A: HU protein SCOP domains
CATH domains 1huuA00 A:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee...----------.....eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu A 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAAR----------MEIPASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - 70 80 90
58 69
Chain B from PDB Type:PROTEIN Length:74
aligned with DBH_BACCA | P0A3H2 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCA 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huub_ B: HU protein SCOP domains
CATH domains 1huuB00 B:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee.----------------.eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------ PROSITE (2)
PROSITE (3) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu B 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERA----------------ASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
56 73
Chain B from PDB Type:PROTEIN Length:74
aligned with DBH_BACCL | P0A3H1 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCL 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huub_ B: HU protein SCOP domains
CATH domains 1huuB00 B:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee.----------------.eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu B 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERA----------------ASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
56 73
Chain B from PDB Type:PROTEIN Length:74
aligned with DBH_GEOSE | P0A3H0 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_GEOSE 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huub_ B: HU protein SCOP domains
CATH domains 1huuB00 B:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeeeee.----------------.eeeeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu B 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERA----------------ASKVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
56 73
Chain C from PDB Type:PROTEIN Length:71
aligned with DBH_BACCA | P0A3H2 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCA 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huuc_ C: HU protein SCOP domains
CATH domains 1huuC00 C:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeee..-------------------.eeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------ PROSITE (2)
PROSITE (3) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (3)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu C 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRER-------------------KVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
55 75
Chain C from PDB Type:PROTEIN Length:71
aligned with DBH_BACCL | P0A3H1 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_BACCL 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huuc_ C: HU protein SCOP domains
CATH domains 1huuC00 C:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeee..-------------------.eeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu C 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRER-------------------KVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
55 75
Chain C from PDB Type:PROTEIN Length:71
aligned with DBH_GEOSE | P0A3H0 from UniProtKB/Swiss-Prot Length:90
Alignment length:90
10 20 30 40 50 60 70 80 90
DBH_GEOSE 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90
SCOP domains d1huuc_ C: HU protein SCOP domains
CATH domains 1huuC00 C:1-90 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....eee...eeeeee..-------------------.eeeeee.hhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE (2) ---------------------------------------------HISTONE_LIKE ------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------ Transcript
1huu C 1 MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLIGFGNFEVRER-------------------KVPAFKPGKALKDAVK 90
10 20 30 40 50 | - - | 80 90
55 75
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |