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(-) Description

Title :  BACILLUS STEAROTHERMOPHILUS PHOE (PREVIOUSLY KNOWN AS YHFR) IN COMPLEX WITH TRIVANADATE
 
Authors :  D. J. Rigden, J. E. Littlejohn, M. J. Jedrzejas
Date :  08 Aug 02  (Deposition) - 12 Aug 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase, Broad Specificity Phosphatase; Dpgm Homolog (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. J. Rigden, J. E. Littlejohn, K. Henderson, M. J. Jedrzejas
Structures Of Phosphate And Trivanadate Complexes Of Bacillus Stearothermophilus Phosphatase Phoe: Structural And Functional Analysis In The Cofactor-Dependent Phosphoglycerate Mutase Superfamily
J. Mol. Biol. V. 325 411 2003
PubMed-ID: 12498792  |  Reference-DOI: 10.1016/S0022-2836(02)01229-9
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PHOSPHATASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PS3297
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: BACILLUS STEAROTHERMOPHILUS
    Organism Taxid: 1422
    Synonym: YHFR

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION
2VA31Ligand/IonTRIVANADATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:2 , THR A:3 , THR A:4 , GLY A:143 , GLU A:144 , THR A:145 , HOH A:2142BINDING SITE FOR RESIDUE PO4 A1210
2AC2SOFTWAREARG A:9 , HIS A:10 , ASN A:16 , GLN A:22 , ARG A:59 , GLU A:83 , HIS A:151 , GLY A:152 , VAL A:153 , VAL A:208 , HOH A:2014 , HOH A:2139 , HOH A:2141BINDING SITE FOR RESIDUE VA3 A1209

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1H2F)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Pro A:173 -Pro A:174

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1H2F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1H2F)

(-) Exons   (0, 0)

(no "Exon" information available for 1H2F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:207
 aligned with Q9ALU0_GEOSE | Q9ALU0 from UniProtKB/TrEMBL  Length:195

    Alignment length:207
                                  1                                                                                                                                                                                               195      
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194|      
         Q9ALU0_GEOSE     - ------TRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWNAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHI------   -
               SCOP domains d1h2fa_ A: Broad specificity phosphatase PhoE (YhfR)                                                                                                                                                            SCOP domains
               CATH domains 1h2fA00 A:2-208 Phosphoglycerate mutase-like                                                                                                                                                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee...hhhhhh...........hhhhhhhhhhhhhhh......eeee..hhhhhhhhhhhhh.....eee.hhhh...hhhhh..hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhh..hhhhh..........eeeeeee..eeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1h2f A   2 ATTLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHIEEVKEV 208
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1H2F)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1H2F)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9ALU0_GEOSE | Q9ALU0: 1ebb 1h2e

(-) Related Entries Specified in the PDB File

1ebb BACILLUS STEAROTHERMOPHILUS YHFR
1h2e BACILLUS STEAROTHERMOPHILUS PHOE (PREVIOUSLY KNOWN AS YHFR) IN COMPLEX WITH PHOSPHATE