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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 8)
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Asymmetric Unit (8, 8)
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit (11, 22)
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Asymmetric Unit (8, 30)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:624 aligned with MMP2_HUMAN | P08253 from UniProtKB/Swiss-Prot Length:660 Alignment length:631 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469 479 489 499 509 519 529 539 549 559 569 579 589 599 609 619 629 639 649 659 MMP2_HUMAN 30 APSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 660 SCOP domains d1gxda1 A:1-78 Gelatinase A (MMP-2) d1gxda3 A:79-187,A:365-421 Gelatinase A d1gxda4 A:188-248 Gelatinase A (MMP-2) type II modules d1gxda5 A:249-308 Gelatinase A (MMP-2) type II modules d1gxda6 A:309-364 Gelatinase A (MMP-2) type II modules d1gxda3 A:79-187,A:365-421 Gelatinase A -------d1gxda2 A:429-631 Gelatinase A (MMP-2), C-terminal domain SCOP domains CATH domains ----------------1gxdA01 A:17-193,A:363-420 Collagenase (Catalytic Domain) -----1gxdA02 A:199-251 [code=2.10.10.10, no name defined]-----1gxdA03 A:257-303 -----------1gxdA04 A:315-361 -1gxdA01 A:17-193,A:363-420 Collagenase (Catalytic Domain) ---------------1gxdA05 A:436-631 Hemopexin CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) (1) -----------------------------------------------------------------------H------------------------------------------------------------------------------------------------------------Y-----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K------------------------------------------V--------------------------------------------------M--------------------------------------------------------------------------------------------------------------------------L----------------------I---------------- SAPs(SNPs) (1) SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------I---------------- SAPs(SNPs) (2) PROSITE (1) ----------------------------------------------------------------------CYSTEINE------------------------------------------------------------------------------------------------------------------------FN2_2 PDB: A:199-247 UniProt: 228-276 ---------FN2_2 PDB: A:257-305 UniProt: 286-334 ---------FN2_2 PDB: A:315-363 UniProt: 344-392 -------ZINC_PROTE--------------------------------------------------------------HEMOPEXIN_2 PDB: A:443-487 UniProt: 472-516 HEMOPEXIN_2 PDB: A:488-534 UniProt: 517-563 -HEMOPEXIN_2 PDB: A:536-584 UniProt: 565-613 HEMOPEXIN_2 PDB: A:585-631 UniProt: 614-660 PROSITE (1) PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FN2_1 PDB: A:204-245 UniProt: 233-274 ----------------FN2_1 PDB: A:262-303 UniProt: 291-332 ----------------FN2_1 PDB: A:320-361 UniProt: 349-390 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEMOPEXIN --------------------------------------- PROSITE (2) Transcript 1 (1) Exon 1.1 PDB: A:1-22 Exon 1.3 PDB: A:23-98 UniProt: 52-127 -------------------------------------------------Exon 1.5 PDB: A:148-191 UniProt: 177-220 ---------------------------------------------------------Exon 1.7 PDB: A:249-307 UniProt: 278-336 -------------------------------------------------------------------------------------------------------------Exon 1.10 PDB: A:417-462 (gaps) ---------------------------------------------Exon 1.12 PDB: A:508-561 UniProt: 537-590 ------------------------------------Exon 1.14b PDB: A:598-631 Transcript 1 (1) Transcript 1 (2) -------------------------------------------------------------------------------------------------Exon 1.4 PDB: A:98-148 UniProt: 127-177 ------------------------------------------Exon 1.6 PDB: A:191-249 UniProt: 220-278 ---------------------------------------------------------Exon 1.8 PDB: A:307-365 UniProt: 336-394 ------------------------------------------------------------------------------------------------Exon 1.11 PDB: A:462-508 UniProt: 491-537 ----------------------------------------------------Exon 1.13 PDB: A:561-598 --------------------------------- Transcript 1 (2) Transcript 1 (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9 PDB: A:365-417 UniProt: 394-446 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3) 1gxd A 1 APSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPD-------TPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 631 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420| 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 421 429 Chain B from PDB Type:PROTEIN Length:623 aligned with MMP2_HUMAN | P08253 from UniProtKB/Swiss-Prot Length:660 Alignment length:630 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 MMP2_HUMAN 31 PSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 660 SCOP domains d1gxdb1 B:2-78 Gelatinase A (MMP-2) d1gxdb3 B:79-187,B:365-421 Gelatinase A d1gxdb4 B:188-248 Gelatinase A (MMP-2) type II modules d1gxdb5 B:249-308 Gelatinase A (MMP-2) type II modules d1gxdb6 B:309-364 Gelatinase A (MMP-2) type II modules d1gxdb3 B:79-187,B:365-421 Gelatinase A -------d1gxdb2 B:429-631 Gelatinase A (MMP-2), C-terminal domain SCOP domains CATH domains ---------------1gxdB01 B:17-193,B:363-420 Collagenase (Catalytic Domain) -----1gxdB02 B:199-251 [code=2.10.10.10, no name defined]-----1gxdB03 B:257-303 -----------1gxdB04 B:315-361 -1gxdB01 B:17-193,B:363-420 Collagenase (Catalytic Domain) ---------------1gxdB05 B:436-631 Hemopexin CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) (1) ----------------------------------------------------------------------H------------------------------------------------------------------------------------------------------------Y-----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K------------------------------------------V--------------------------------------------------M--------------------------------------------------------------------------------------------------------------------------L----------------------I---------------- SAPs(SNPs) (1) SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------I---------------- SAPs(SNPs) (2) PROSITE (1) ---------------------------------------------------------------------CYSTEINE------------------------------------------------------------------------------------------------------------------------FN2_2 PDB: B:199-247 UniProt: 228-276 ---------FN2_2 PDB: B:257-305 UniProt: 286-334 ---------FN2_2 PDB: B:315-363 UniProt: 344-392 -------ZINC_PROTE--------------------------------------------------------------HEMOPEXIN_2 PDB: B:443-487 UniProt: 472-516 HEMOPEXIN_2 PDB: B:488-534 UniProt: 517-563 -HEMOPEXIN_2 PDB: B:536-584 UniProt: 565-613 HEMOPEXIN_2 PDB: B:585-631 UniProt: 614-660 PROSITE (1) PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FN2_1 PDB: B:204-245 UniProt: 233-274 ----------------FN2_1 PDB: B:262-303 UniProt: 291-332 ----------------FN2_1 PDB: B:320-361 UniProt: 349-390 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEMOPEXIN --------------------------------------- PROSITE (2) Transcript 1 (1) Exon 1.1 PDB: B:2-22Exon 1.3 PDB: B:23-98 UniProt: 52-127 -------------------------------------------------Exon 1.5 PDB: B:148-191 UniProt: 177-220 ---------------------------------------------------------Exon 1.7 PDB: B:249-307 UniProt: 278-336 -------------------------------------------------------------------------------------------------------------Exon 1.10 PDB: B:417-462 (gaps) ---------------------------------------------Exon 1.12 PDB: B:508-561 UniProt: 537-590 ------------------------------------Exon 1.14b PDB: B:598-631 Transcript 1 (1) Transcript 1 (2) ------------------------------------------------------------------------------------------------Exon 1.4 PDB: B:98-148 UniProt: 127-177 ------------------------------------------Exon 1.6 PDB: B:191-249 UniProt: 220-278 ---------------------------------------------------------Exon 1.8 PDB: B:307-365 UniProt: 336-394 ------------------------------------------------------------------------------------------------Exon 1.11 PDB: B:462-508 UniProt: 491-537 ----------------------------------------------------Exon 1.13 PDB: B:561-598 --------------------------------- Transcript 1 (2) Transcript 1 (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9 PDB: B:365-417 UniProt: 394-446 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3) 1gxd B 2 PSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPD-------TPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC 631 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581 591 601 611 621 631 421 429 Chain C from PDB Type:PROTEIN Length:192 aligned with TIMP2_HUMAN | P16035 from UniProtKB/Swiss-Prot Length:220 Alignment length:192 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 TIMP2_HUMAN 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNHRYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFLDIE 218 SCOP domains d1gxdc_ C: TIMP-2 SCOP domains CATH domains 1gxdC01 1gxdC02 C:15-110 [code=2.40.50.120, no name defined] 1gxdC01 C:1-14,C:111-182 ---------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (1) TIMP ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1) PROSITE (2) NTR PDB: C:1-126 UniProt: 27-152 ------------------------------------------------------------------ PROSITE (2) Transcript 2 (1) Exon 2.1 ---------------------------------Exon 2.3 PDB: C:52-88 -----------------------------------------Exon 2.5b PDB: C:130-192 UniProt: 156-220 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) -----------------Exon 2.2b PDB: C:18-51 ------------------------------------Exon 2.4a PDB: C:88-129 UniProt: 114-155 --------------------------------------------------------------- Transcript 2 (2) 1gxd C 1 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNHRYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFLDIE 192 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 Chain D from PDB Type:PROTEIN Length:192 aligned with TIMP2_HUMAN | P16035 from UniProtKB/Swiss-Prot Length:220 Alignment length:192 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 TIMP2_HUMAN 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNHRYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFLDIE 218 SCOP domains d1gxdd_ D: TIMP-2 SCOP domains CATH domains 1gxdD01 1gxdD02 D:15-110 [code=2.40.50.120, no name defined] 1gxdD01 D:1-14,D:111-182 ---------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE (1) TIMP ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1) PROSITE (2) NTR PDB: D:1-126 UniProt: 27-152 ------------------------------------------------------------------ PROSITE (2) Transcript 2 (1) Exon 2.1 ---------------------------------Exon 2.3 PDB: D:52-88 -----------------------------------------Exon 2.5b PDB: D:130-192 UniProt: 156-220 [INCOMPLETE] Transcript 2 (1) Transcript 2 (2) -----------------Exon 2.2b PDB: D:18-51 ------------------------------------Exon 2.4a PDB: D:88-129 UniProt: 114-155 --------------------------------------------------------------- Transcript 2 (2) 1gxd D 1 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNHRYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFLDIE 192 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190
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Asymmetric Unit
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Asymmetric Unit
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(no "Pfam Domain" information available for 1GXD) |
Asymmetric Unit(hide GO term definitions) Chain A,B (MMP2_HUMAN | P08253)
Chain C,D (TIMP2_HUMAN | P16035)
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