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(-) Description

Title :  CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH MANNOHEXAOSE
 
Authors :  S. J. Charnock, D. Nurizzo, G. J. Davies
Date :  19 Mar 02  (Deposition) - 20 Mar 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.51
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Carbohydrate Binding Domain, Glucomannan, Cellohexaose, Mannohexaose, Cellulosome (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. J. Charnock, D. Bolam, D. Nurizzo, L. Szabo, V. Mckie, H. Gilbert, G. J. Davies
Promiscuity In Ligand-Binding: The Three-Dimensional Structure Of A Piromyces Carbohydrate-Binding Module, Cbm29-2, In Complex With Cello- And Mannohexaose
Proc. Natl. Acad. Sci. Usa V. 99 14077 2002
PubMed-ID: 12391332  |  Reference-DOI: 10.1073/PNAS.212516199

(-) Compounds

Molecule 1 - NON-CATALYTIC PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET22B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Fragment: CARBOHYDRATE BINDING MODULE FAMILY 29 RESIDUES 335-478
    Organism Scientific: PIROMYCES EQUI
    Organism Taxid: 99929
    Synonym: NCP1

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1BMA6Ligand/IonBETA-D-MANNOSE
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1BMA12Ligand/IonBETA-D-MANNOSE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:118 , PRO A:119 , ARG A:124 , BMA A:1144 , HOH A:2109 , HOH A:2189BINDING SITE FOR RESIDUE BMA A1143
2AC2SOFTWAREGLU A:70 , LYS A:74 , GLN A:116 , ALA A:118 , BMA A:1143 , BMA A:1145 , HOH A:2169BINDING SITE FOR RESIDUE BMA A1144
3AC3SOFTWARETRP A:26 , GLN A:116 , BMA A:1144 , BMA A:1146 , HOH A:2191 , HOH A:2192 , HOH A:2193 , HOH A:2194BINDING SITE FOR RESIDUE BMA A1145
4AC4SOFTWARETRP A:26 , GLU A:78 , ARG A:112 , BMA A:1145 , BMA A:1147 , HOH A:2119 , HOH A:2192 , HOH A:2195 , HOH A:2196BINDING SITE FOR RESIDUE BMA A1146
5AC5SOFTWARETRP A:24 , ARG A:112 , BMA A:1146 , BMA A:1148 , HOH A:2119 , HOH A:2198 , HOH A:2199BINDING SITE FOR RESIDUE BMA A1147
6AC6SOFTWARETRP A:24 , SER A:92 , BMA A:1147 , HOH A:2200BINDING SITE FOR RESIDUE BMA A1148

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1GWL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1GWL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1GWL)

(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:141
 aligned with Q9C171_PIREQ | Q9C171 from UniProtKB/TrEMBL  Length:478

    Alignment length:141
                                   344       354       364       374       384       394       404       414       424       434       444       454       464       474 
         Q9C171_PIREQ   335 NVRATYTVIFKNASGLPNGYDNWGWGCTLSYYGGAMIINPQEGKYGAVSLKRNSGSFRGGSLRFDMKNEGKVKILVENSEADEKFEVETISPSDEYVTYILDVDFDLPFDRIDFQDAPGNGDRIWIKNLVHSTGSADDFVD 475
               SCOP domains d1gwla_ A: Non-catalytic protein 1, Ncp1                                                                                                      SCOP domains
               CATH domains 1gwlA00 A:2-142  [code=2.60.120.360, no name defined]                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee.........eee....eeeeee..eeeeee......eeeeee........eeeeeeee...eeeeeee....eeeeeeee..eeeeeeeeee........eeeeee.......eeeeeeeee..hhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gwl A   2 NVRATYTVIFKNASGLPNGYDNWGWGCTLSYYGGAMIINPQEGKYGAVSLKRNSGSFRGGSLRFDMKNEGKVKILVENSEADEKFEVETISPSDEYVTYILDVDFDLPFDRIDFQDAPGNGDRIWIKNLVHSTGSADDFVD 142
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GWL)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1GWL)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9C171_PIREQ | Q9C171: 1gwk 1gwm 1oh3 1w8t 1w8u 1w8w 1w8z 1w90 1w9f 1wcu

(-) Related Entries Specified in the PDB File

1gwk CARBOHYDRATE BINDING MODULE FAMILY29
1gwm CARBOHYDRATE BINDING MODULE FAMILY29 COMPLEXED WITH GLUCOHEXAOSE