1GSZ - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF A SQUALENE CYCLASE IN COMPLEX WITH THE POTENTIAL ANTICHOLESTEREMIC DRUG RO48-8071

Authors :   A. Lenhart, W. A. Weihofen, A. E. W. Pleschke, G. E. Schulz

Date :   09 Jan 02 (Deposition) - 16 Jan 03 (Release) - 20 Nov 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A (1x),B (1x)
Biol. Unit 2: A (1x),B (1x)
Biol. Unit 3: C  (2x)

Keywords :   Isomerase, Cholesterol Biosynthesis, Inhibitor Oxidosqualene Cyclase, Monotopic Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Lenhart, W. A. Weihofen, A. E. W. Pleschke, G. E. Schulz
Crystal Structure Of A Squalene Cyclase In Complex With The Potential Anticholesteremic Drug Ro48-8071
Chem. Biol. V. 9 639 2002
PubMed-ID: 12031670 | Reference-DOI: 10.1016/S1074-5521(02)00138-2
(for further references see the PDB file header)

Molecule 1 - SQUALENE--HOPENE CYCLASE
	Chains	:	A, B, C
	EC Number	:	5.4.99.17
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI K-12
	Expression System Plasmid	:	PKK223-3
	Expression System Taxid	:	83333
	Expression System Variant	:	JM105
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	ALICYCLOBACILLUS ACIDOCALDARIUS
	Organism Taxid	:	405212
	Other Details	:	THERMOSTABLE, ACIDOPHILIC

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A (1x)	B (1x)
Biological Unit 2 (1x)	:	A (1x)	B (1x)
Biological Unit 3 (2x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 6)

No.	Name	Count	Type	Full Name
1	C8E	3	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2	R71	3	Ligand/Ion	[4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4-BROMOPHENYL)METHANONE

Biological Unit 1 (2, 2)

No.	Name	Count	Type	Full Name
1	C8E	1	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2	R71	1	Ligand/Ion	[4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4-BROMOPHENYL)METHANONE

Biological Unit 2 (2, 2)

No.	Name	Count	Type	Full Name
1	C8E	1	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2	R71	1	Ligand/Ion	[4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4-BROMOPHENYL)METHANONE

Biological Unit 3 (2, 4)

No.	Name	Count	Type	Full Name
1	C8E	2	Ligand/Ion	(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
2	R71	2	Ligand/Ion	[4-({6-[ALLYL(METHYL)AMINO]HEXYL}OXY)-2-FLUOROPHENYL](4-BROMOPHENYL)METHANONE

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:251 , PRO A:348 , GLY A:349 , ASP A:350 , VAL A:353 , ARG B:238 , ILE B:242	BINDING SITE FOR RESIDUE C8E A1629
2	AC2	SOFTWARE	PHE A:129 , TRP A:169 , THR A:173 , ILE A:261 , PRO A:263 , TRP A:312 , PHE A:365 , ASP A:376 , TRP A:489 , PHE A:601 , PHE A:605 , TYR A:609	BINDING SITE FOR RESIDUE R71 A1630
3	AC3	SOFTWARE	ARG A:183 , ARG A:238 , ILE A:242 , ARG B:251 , GLY B:349 , ASP B:350 , VAL B:353 , TYR B:371	BINDING SITE FOR RESIDUE C8E B1629
4	AC4	SOFTWARE	PHE B:129 , TRP B:169 , ALA B:170 , THR B:173 , ILE B:261 , PRO B:263 , TRP B:312 , ASP B:374 , ASP B:376 , PHE B:437 , TRP B:489 , PHE B:601 , PHE B:605 , TYR B:609 , HOH B:2057 , HOH B:2061	BINDING SITE FOR RESIDUE R71 B1630
5	AC5	SOFTWARE	ARG C:238 , ILE C:242 , ARG C:251 , PRO C:348 , GLY C:349 , ASP C:350 , TYR C:371	BINDING SITE FOR RESIDUE C8E C1629
6	AC6	SOFTWARE	PHE C:129 , TRP C:169 , ALA C:170 , THR C:173 , ILE C:261 , PRO C:263 , TRP C:312 , PHE C:365 , ASP C:374 , ASP C:376 , ASP C:377 , TYR C:420 , PHE C:437 , TRP C:489 , PHE C:601 , PHE C:605 , TYR C:609 , HOH C:2081	BINDING SITE FOR RESIDUE R71 C1630

(no "SS Bond" information available for 1GSZ)

Asymmetric Unit

No.	Residues
1	Val A:491	-	Asn A:492
2	Val B:491	-	Asn B:492
3	Val C:491	-	Asn C:492

(no "SAP(SNP)/Variant" information available for 1GSZ)

Asymmetric Unit (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TERPENE_SYNTHASES	PS01074	Terpene synthases signature.	SQHC_ALIAD	482-496	3	A:482-496 B:482-496 C:482-496

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TERPENE_SYNTHASES	PS01074	Terpene synthases signature.	SQHC_ALIAD	482-496	2	A:482-496 B:482-496 -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TERPENE_SYNTHASES	PS01074	Terpene synthases signature.	SQHC_ALIAD	482-496	2	A:482-496 B:482-496 -

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TERPENE_SYNTHASES	PS01074	Terpene synthases signature.	SQHC_ALIAD	482-496	2	- - C:482-496

(no "Exon" information available for 1GSZ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:620
 aligned with SQHC_ALIAD | P33247 from UniProtKB/Swiss-Prot  Length:631

    Alignment length:620
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629
           SQHC_ALIAD    10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
               SCOP domains d1gsza1 A:10-36,A:308-628  d1gsza2 A:37-307 Squalene-hopene cyclase                                                                                                                                                                                                                                       d1gsza1 A:10-36,A:308-628 Squalene-hopene cyclase                                                                                                                                                                                                                                                                                - SCOP domains
               CATH domains 1gszA01 A:10-35,A:308-628 1gszA02 A:36-307  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                            1gszA01 A:10-35,A:308-628  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                                                                    - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhh...........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhh...............hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh....hhhhhhhhhhh...eee.....eee....hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.....hhhhh...................hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh..................hhhhh............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..........hhhhhhhhhhh.....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............eeee...eeeee.hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TERPENE_SYNTHAS------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gsz A  10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629

Chain B from PDB  Type:PROTEIN  Length:620
 aligned with SQHC_ALIAD | P33247 from UniProtKB/Swiss-Prot  Length:631

    Alignment length:620
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629
           SQHC_ALIAD    10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
               SCOP domains d1gszb1 B:10-36,B:308-628  d1gszb2 B:37-307 Squalene-hopene cyclase                                                                                                                                                                                                                                       d1gszb1 B:10-36,B:308-628 Squalene-hopene cyclase                                                                                                                                                                                                                                                                                - SCOP domains
               CATH domains 1gszB01 B:10-35,B:308-628 1gszB02 B:36-307  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                            1gszB01 B:10-35,B:308-628  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                                                                    - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhh...........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhh...............hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh....hhhhhhhhhhhhhheee.....eee....hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh....hhhhhh...................hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh................hhhhh............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..........hhhhhhhhhhh.....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............eeee...eeeee.hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TERPENE_SYNTHAS------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gsz B  10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629

Chain C from PDB  Type:PROTEIN  Length:620
 aligned with SQHC_ALIAD | P33247 from UniProtKB/Swiss-Prot  Length:631

    Alignment length:620
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629
           SQHC_ALIAD    10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
               SCOP domains d1gszc1 C:10-36,C:308-628  d1gszc2 C:37-307 Squalene-hopene cyclase                                                                                                                                                                                                                                       d1gszc1 C:10-36,C:308-628 Squalene-hopene cyclase                                                                                                                                                                                                                                                                                - SCOP domains
               CATH domains 1gszC01 C:10-35,C:308-628 1gszC02 C:36-307  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                            1gszC01 C:10-35,C:308-628  [code=1.50.10.20, no name defined]                                                                                                                                                                                                                                                                    - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.........ee..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhh...hhhhhhh...........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhh...............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh....hhhhhhhhhhhhh.eeee...eeee....hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh....hhhhhh...................hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh................hhhhh............hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..........hhhhhhhhhhh.....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh............eeee...eeeee.hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TERPENE_SYNTHAS------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gsz C  10 AYARTLDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMTQHPAFIKGWEGLELYGVELDYGGWMFQASISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVTAHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIE 629
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: alpha/alpha toroid (324)

Superfamily: Terpenoid cyclases/Protein prenyltransferases (151)

Family: Terpene synthases (18)

Protein domain: Squalene-hopene cyclase (16)

Alicyclobacillus acidocaldarius [TaxId: 405212] (16)

1a	d1gsza1	A:10-36,A:308-628
1b	d1gsza2	A:37-307
1c	d1gszb1	B:10-36,B:308-628
1d	d1gszb2	B:37-307
1e	d1gszc1	C:10-36,C:308-628
1f	d1gszc2	C:37-307

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Alpha (13335)

Architecture: Alpha/alpha barrel (251)

Topology: Glycosyltransferase (233)

Homologous Superfamily: [code=1.50.10.20, no name defined] (105)

Alicyclobacillus acidocaldarius. Organism_taxid: 405212. (1)

1a	1gszA01	A:10-35,A:308-628
1b	1gszB01	B:10-35,B:308-628
1c	1gszC01	C:10-35,C:308-628
1d	1gszA02	A:36-307
1e	1gszB02	B:36-307
1f	1gszC02	C:36-307

(no "Pfam Domain" information available for 1GSZ)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (SQHC_ALIAD | P33247)

molecular function
	GO:0016866	intramolecular transferase activity	Catalysis of the transfer of a functional group from one position to another within a single molecule.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0051007	squalene-hopene cyclase activity	Catalysis of the reaction: squalene = hop-22(29)-ene.
biological process
	GO:0019746	hopanoid biosynthetic process	The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.
cellular component
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Asymmetric Unit
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		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Val A:491 - Asn A:492	[ RasMol ]
		Val B:491 - Asn B:492	[ RasMol ]
		Val C:491 - Asn C:492	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1gsz
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		Orientation in Membranes	:	OPM
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		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
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	SQHC_ALIAD \| P33247
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	5.4.99.17
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	SQHC_ALIAD \| P33247
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1sqc	SQUALENE-HOPENE-CYCLASE FROM ALICYCLOBACILLUS ACIDOCALDARIUS
2sqc	SQUALENE-HOPENE CYCLASE FROM ALICYCLOBACILLUS ACIDOCALDARIUS
3sqc	SQUALENE-HOPENE CYCLASE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 6)

Sites (6, 6)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 3)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 6)

CATH Domains (1, 6)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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Still Images

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Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File