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(-) Description

Title :  PLASMID COUPLING PROTEIN TRWB IN COMPLEX WITH THE NON-HYDROLISABLE ATP-ANALOGUE ADPNP.
 
Authors :  F. X. Gomis-Ruth, G. Moncalian, F. De La Cruz, M. Coll
Date :  28 Aug 01  (Deposition) - 16 May 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A,B,D,E,F,G
Keywords :  Coupling Protein, Type Iv Secretion System Conjugative Coupling Protein From Plasmid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. X. Gomis-Ruth, G. Moncalian, R. Perez-Luque, A. Gonzalez, E. Cabezon, F. De La Cruz, M. Coll
The Bacterial Conjugation Protein Trwb Resembles Ring Helicases And F1-Atpase
Nature V. 409 637 2001
PubMed-ID: 11214325  |  Reference-DOI: 10.1038/35054586
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CONJUGAL TRANSFER PROTEIN TRWB
    Chains: A, B, D, E, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: CYTOSOLIC FRAGMENT, RESIDUES 71-507
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Other Details: COMPLEX WITH ADPNP.
    Synonym: ATPASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 7)

Asymmetric/Biological Unit (2, 7)
No.NameCountTypeFull Name
1ANP6Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2CL1Ligand/IonCHLORIDE ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:132 , GLY A:133 , GLY A:135 , LYS A:136 , SER A:137 , VAL A:138 , ILE A:492 , ARG B:124 , ARG B:375BINDING SITE FOR RESIDUE ANP A 701
2AC2SOFTWARETHR B:132 , GLY B:133 , GLY B:135 , LYS B:136 , SER B:137 , VAL B:138 , ILE B:492 , GLN B:494 , ARG D:124 , ARG D:375BINDING SITE FOR RESIDUE ANP B 701
3AC3SOFTWARETHR D:132 , GLY D:133 , GLY D:135 , LYS D:136 , SER D:137 , VAL D:138 , ILE D:492 , GLN D:494 , ARG E:124 , ARG E:375BINDING SITE FOR RESIDUE ANP D 701
4AC4SOFTWARETHR E:132 , GLY E:133 , GLY E:135 , LYS E:136 , SER E:137 , VAL E:138 , ILE E:492 , GLN E:494 , ARG F:375BINDING SITE FOR RESIDUE ANP E 701
5AC5SOFTWARETHR F:132 , GLY F:133 , GLY F:135 , LYS F:136 , SER F:137 , VAL F:138 , ILE F:492 , GLN F:494 , ARG G:124 , ARG G:375BINDING SITE FOR RESIDUE ANP F 701
6AC6SOFTWAREARG A:124 , ARG A:375 , THR G:132 , GLY G:133 , GLY G:135 , LYS G:136 , SER G:137 , VAL G:138 , ILE G:492BINDING SITE FOR RESIDUE ANP G 701

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1GL7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1GL7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1GL7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1GL7)

(-) Exons   (0, 0)

(no "Exon" information available for 1GL7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:411
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:427
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       
         Q04230_ECOLX    78 EFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
               SCOP domains d1gl7a_ A: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1gl7A01 A:78-184,A:298-503 P-loop containing nucleotide triphosphate hydrolases                            1gl7A02 A:185-297  [code=1.10.8.80, no name defined]                                                             1gl7A01 A:78-184,A:298-503 P-loop containing nucleotide triphosphate hydrolases                                                                                                                               - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhh..........eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeee..----------------.eeeee..hhhhhhh....eeeee......eeeee............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 A  78 EFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD----------------ERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437|        -       457       467       477       487       497       
                                                                                                                                                                                                                                                                                                                                                                                                  438              455                                                 


Chain B from PDB  Type:PROTEIN  Length:417
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:431
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503 
         Q04230_ECOLX    74 VGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
               SCOP domains d1gl7b_ B: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 1gl7B01 B:74-184,B:298-503 P-loop containing nucleotide triphosphate hydrolases                                1gl7B02 B:185-297  [code=1.10.8.80, no name defined]                                                             1gl7B01 B:74-184,B:298-503 P-loop containing nucleotide triphosphate hydrolases                                                                                                                               - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee....hhhhhhhhhh......ee..ee.hhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeeee..--------------.eeeeee..hhhhhhh....eeeee......eeeee............... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 B  74 VGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR--------------LERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433     |   -         -|      463       473       483       493       503 
                                                                                                                                                                                                                                                                                                                                                                                                       439            454                                                  


Chain D from PDB  Type:PROTEIN  Length:417
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:431
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504 
         Q04230_ECOLX    75 GQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1gl7d_ D: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 1gl7D01 D:75-184,D:298-504 P-loop containing nucleotide triphosphate hydrolases                               1gl7D02 D:185-297  [code=1.10.8.80, no name defined]                                                             1gl7D01 D:75-184,D:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee..eehhhhhhhhhh.....eee..eeehhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhh..........eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeeee..--------------.eeeeee..hhhhhhh....eeeee......eeeee................ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 D  75 GQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR--------------LERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434    |    -       454       464       474       484       494       504 
                                                                                                                                                                                                                                                                                                                                                                                                      439            454                                                   


Chain E from PDB  Type:PROTEIN  Length:414
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:429
                                    85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495         
         Q04230_ECOLX    76 QGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
               SCOP domains d1gl7e_ E: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1gl7E01 E:76-184,E:298-503 P-loop containing nucleotide triphosphate hydrolases                              1gl7E02 E:185-297  [code=1.10.8.80, no name defined]                                                             1gl7E01 E:76-184,E:298-503 P-loop containing nucleotide triphosphate hydrolases                                                                                                                               - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeeee.---------------.eeeeee..hhhhhhh....eeeee......eeeee............... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 E  76 QGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD---------------LERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE 504
                                    85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435  |      -       455       465       475       485       495         
                                                                                                                                                                                                                                                                                                                                                                                                    438             454                                                  


Chain F from PDB  Type:PROTEIN  Length:413
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:430
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506
         Q04230_ECOLX    77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
               SCOP domains d1gl7f_ F: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1gl7F01 F:77-184,F:298-505 P-loop containing nucleotide triphosphate hydrolases                             1gl7F02 F:185-297  [code=1.10.8.80, no name defined]                                                             1gl7F01 F:77-184,F:298-505 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                 - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..eeehhhhhhhhh......ee..ee.hhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeee.-----------------.eeeee..hhhhhhh....eeeee......eeeee................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 F  77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVER-----------------ERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436|        -       456       466       476       486       496       506
                                                                                                                                                                                                                                                                                                                                                                                                  437               455                                                   


Chain G from PDB  Type:PROTEIN  Length:412
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:428
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        
         Q04230_ECOLX    78 EFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1gl7g_ G: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 1gl7G01 G:78-184,G:298-504 P-loop containing nucleotide triphosphate hydrolases                            1gl7G02 G:185-297  [code=1.10.8.80, no name defined]                                                             1gl7G01 G:78-184,G:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee....hhhhhhhhhh.....eee..eeehhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhhhh..........eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhheeeee..----------------.eeeee..hhhhhhh....eeeee.......eeee................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gl7 G  78 EFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD----------------ERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437|        -       457       467       477       487       497        
                                                                                                                                                                                                                                                                                                                                                                                                  438              455
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
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 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: P-loop containing nucleotide triphosphate hydrolases (1378)
(-)
Escherichia coli. Organism_taxid: 562. (35)
1a1gl7G01G:78-184,G:298-504
1b1gl7F01F:77-184,F:298-505
1c1gl7D01D:75-184,D:298-504
1d1gl7A01A:78-184,A:298-503
1e1gl7E01E:76-184,E:298-503
1f1gl7B01B:74-184,B:298-503
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GL7)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,D,E,F,G   (Q04230_ECOLX | Q04230)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  1gl7
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  Q04230_ECOLX | Q04230
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q04230_ECOLX | Q04230: 1e9r 1e9s 1gki 1gl6

(-) Related Entries Specified in the PDB File

1e9r BACTERIAL CONJUGATIVE COUPLING PROTEIN TRWBDELTAN70. TRIGONAL FORM IN COMPLEX WITH SULPHATE.
1e9s BACTERIAL CONJUGATIVE COUPLING PROTEIN TRWBDELTAN70. UNBOUND MONOCLINIC FORM.
1gki PLASMID COUPLING PROTEIN TRWB IN COMPLEX WITH ADP AND MG2+.
1gl6 PLASMID COUPLING PROTEIN TRWB IN COMPLEX WITH THE NON-HYDROLYSABLE GTP ANALOGUE GDPNP