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(-) Description

Title :  BACTERIAL CONJUGATIVE COUPLING PROTEIN TRWBDELTAN70. TRIGONAL FORM IN COMPLEX WITH SULPHATE.
 
Authors :  F. X. Gomis-Rueth, G. Moncalian, E. Cabezon, F. De La Cruz, M. Coll
Date :  26 Oct 00  (Deposition) - 06 Feb 01  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B,D,E,F,G
Keywords :  Coupling Protein, Bacterial Conjugation, F1-Atpase-Like Quaternary Structure, Ring Helicases (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. X. Gomis-Rueth, G. Moncalian, R. Perez-Luque, A. Gonzalez, E. Cabezon, F. De La Cruz, M. Coll
The Bacterial Conjugation Protein Trwb Resembles Ring Helicases And F1-Atpase
Nature V. 409 637 2001
PubMed-ID: 11214325  |  Reference-DOI: 10.1038/35054586

(-) Compounds

Molecule 1 - CONJUGAL TRANSFER PROTEIN TRWB
    Chains: A, B, D, E, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: TRANSMEMBRANE-ANCHOR-EXCISED PROTEIN
    Gene: TRWB
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Plasmid: R388

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 15)

Asymmetric/Biological Unit (1, 15)
No.NameCountTypeFull Name
1SO415Ligand/IonSULFATE ION

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREALA A:131 , THR A:132 , GLY A:133 , THR A:134 , GLY A:135 , LYS A:136 , SER A:137 , HOH A:2200BINDING SITE FOR RESIDUE SO4 A 601
02AC2SOFTWAREGLN A:198 , ARG A:207 , HOH A:2201BINDING SITE FOR RESIDUE SO4 A 602
03AC3SOFTWAREALA B:131 , GLY B:133 , THR B:134 , GLY B:135 , LYS B:136 , SER B:137 , HOH B:2024BINDING SITE FOR RESIDUE SO4 B 601
04AC4SOFTWARESER B:95 , LYS B:98 , ARG B:101 , HOH B:2173 , TRP D:245BINDING SITE FOR RESIDUE SO4 B 602
05AC5SOFTWAREALA D:131 , THR D:132 , GLY D:133 , THR D:134 , GLY D:135 , LYS D:136 , SER D:137BINDING SITE FOR RESIDUE SO4 D 601
06AC6SOFTWARESER D:95 , ARG D:101 , HOH D:2145BINDING SITE FOR RESIDUE SO4 D 602
07AC7SOFTWAREARG D:169 , ASP D:170 , ARG D:498 , HOH D:2146BINDING SITE FOR RESIDUE SO4 D 603
08AC8SOFTWAREGLN D:198 , ARG D:207 , HOH D:2147 , HOH D:2148BINDING SITE FOR RESIDUE SO4 D 604
09AC9SOFTWAREALA E:131 , GLY E:133 , THR E:134 , GLY E:135 , LYS E:136 , SER E:137 , HOH E:2016BINDING SITE FOR RESIDUE SO4 E 601
10BC1SOFTWARESER E:95 , GLY E:97 , ARG E:101BINDING SITE FOR RESIDUE SO4 E 602
11BC2SOFTWAREALA F:131 , THR F:132 , GLY F:133 , THR F:134 , GLY F:135 , LYS F:136 , SER F:137BINDING SITE FOR RESIDUE SO4 F 601
12BC3SOFTWAREARG F:169 , ASP F:170 , ARG F:498BINDING SITE FOR RESIDUE SO4 F 602
13BC4SOFTWAREGLN F:198 , ARG F:207BINDING SITE FOR RESIDUE SO4 F 603
14BC5SOFTWAREALA G:131 , THR G:132 , GLY G:133 , THR G:134 , GLY G:135 , LYS G:136 , SER G:137BINDING SITE FOR RESIDUE SO4 G 601
15BC6SOFTWARESER G:95 , ARG G:101 , HOH G:2184BINDING SITE FOR RESIDUE SO4 G 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1E9R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1E9R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1E9R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1E9R)

(-) Exons   (0, 0)

(no "Exon" information available for 1E9R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:420
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:433
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503   
         Q04230_ECOLX    74 VGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
               SCOP domains d1e9ra_ A: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 1e9rA01 A:74-184,A:298-506 P-loop containing nucleotide triphosphate hydrolases                                1e9rA02 A:185-297  [code=1.10.8.80, no name defined]                                                             1e9rA01 A:74-184,A:298-506 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                   CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeeee....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhheeeeeee.-------------.eeeeeee..hhhhhhh....eeeee......eeeee................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1e9r A  74 VGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433     |   -       453       463       473       483       493       503   
                                                                                                                                                                                                                                                                                                                                                                                                       439           453                                                     


Chain B from PDB  Type:PROTEIN  Length:422
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:434
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501    
         Q04230_ECOLX    72 NSVGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1e9rb_ B: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains --1e9rB01 B:74-184,B:298-504 P-loop containing nucleotide triphosphate hydrolases                                1e9rB02 B:185-297  [code=1.10.8.80, no name defined]                                                             1e9rB01 B:74-184,B:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeee.....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhh...eeee......hhhhhhhhhhhhheeeeeee..------------.eeeeeee..hhhhhhh....eeeee......eeeee................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1e9r B  72 NSVGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRY------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431        |-         - |     461       471       481       491       501    
                                                                                                                                                                                                                                                                                                                                                                                                          440          453                                                    


Chain D from PDB  Type:PROTEIN  Length:415
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:429
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496         
         Q04230_ECOLX    77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1e9rd_ D: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1e9rD01 D:77-184,D:298-504 P-loop containing nucleotide triphosphate hydrolases                             1e9rD02 D:185-297  [code=1.10.8.80, no name defined]                                                             1e9rD01 D:77-184,D:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeeee....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhheeeeee.--------------..eeeeee..hhhhhhh....eeeee......eeeee................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1e9r D  77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD--------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436 |       -      |456       466       476       486       496         
                                                                                                                                                                                                                                                                                                                                                                                                   438            453                                                    


Chain E from PDB  Type:PROTEIN  Length:419
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:432
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504  
         Q04230_ECOLX    75 GQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
               SCOP domains d1e9re_ E: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1e9rE01 E:75-184,E:298-505 P-loop containing nucleotide triphosphate hydrolases                               1e9rE02 E:185-297  [code=1.10.8.80, no name defined]                                                             1e9rE01 E:75-184,E:298-505 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                 - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........eeeee..eehhhhhhhhhh......ee..ee.hhhhhhh.eeeee....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhheeeeeee.-------------.eeeeeee..hhhhhhh....eeeee......eeeee................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1e9r E  75 GQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT 506
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434    |    -       454       464       474       484       494       504  
                                                                                                                                                                                                                                                                                                                                                                                                      439           453                                                     


Chain F from PDB  Type:PROTEIN  Length:416
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:429
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496         
         Q04230_ECOLX    77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1e9rf_ F: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1e9rF01 F:77-184,F:298-504 P-loop containing nucleotide triphosphate hydrolases                             1e9rF02 F:185-297  [code=1.10.8.80, no name defined]                                                             1e9rF01 F:77-184,F:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..eehhhhhhhhhh......ee..ee....hhhh.eeeee....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhheeeeeee.-------------.eeeeeee..hhhhhhh....eeeee......eeeee................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1e9r F  77 GEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436  |      -      |456       466       476       486       496         
                                                                                                                                                                                                                                                                                                                                                                                                    439           453                                                    


Chain G from PDB  Type:PROTEIN  Length:417
 aligned with Q04230_ECOLX | Q04230 from UniProtKB/TrEMBL  Length:507

    Alignment length:430
                                    85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505
         Q04230_ECOLX    76 QGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDRYSKNTGKHHSTGRALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
               SCOP domains d1e9rg_ G: Bacterial conjugative coupling protein TrwB                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains 1e9rG01 G:76-184,G:298-504 P-loop containing nucleotide triphosphate hydrolases                              1e9rG02 G:185-297  [code=1.10.8.80, no name defined]                                                             1e9rG01 G:76-184,G:298-504 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                - CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eehhhhhhhhhh......ee..ee....hhhh.eeeee....hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhh....eee..........hhhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhh..hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh....hhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhheeeeeee.-------------.eeeeeee..hhhhhhh....eeeee......eeeee................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1e9r G  76 QGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEG 505
                                    85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435   |     -       455       465       475       485       495       505
                                                                                                                                                                                                                                                                                                                                                                                                     439           453
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 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: P-loop containing nucleotide triphosphate hydrolases (1378)
(-)
Escherichia coli. Organism_taxid: 562. (54)
1a1e9rD01D:77-184,D:298-504
1b1e9rF01F:77-184,F:298-504
1c1e9rG01G:76-184,G:298-504
1d1e9rE01E:75-184,E:298-505
1e1e9rB01B:74-184,B:298-504
1f1e9rA01A:74-184,A:298-506
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1E9R)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,D,E,F,G   (Q04230_ECOLX | Q04230)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  1e9r
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  Q04230_ECOLX | Q04230
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q04230_ECOLX | Q04230: 1e9s 1gki 1gl6 1gl7

(-) Related Entries Specified in the PDB File

1e9s BACTERIAL CONJUGATIVE COUPLING PROTEIN TRWBDELTAN70. UNBOUND MONOCLINIC FORM.