Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)

(-) Description

Title :  MALK
 
Authors :  K. Diederichs, J. Diez, G. Greller, C. Mueller, J. Breed, C. Schnell, C. Vonrhein, W. Boos, W. Welte
Date :  18 Oct 00  (Deposition) - 06 Dec 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  1,2
Biol. Unit 1:  1,2  (1x)
Biol. Unit 2:  1 (2x),2 (2x)
Biol. Unit 3:  1 (1x),2 (1x)
Keywords :  Atpase, Active Transport, Maltose Uptake And Regulation, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Diederichs, J. Diez, G. Greller, C. Muller, J. Breed, C. Schnell, C. Vonrhein, W. Boos, W. Welte
Crystal Structure Of Malk, The Atpase Subunit Of The Trehalose/Maltose Abc Transporter Of The Archaeon Thermococcus Litoralis.
Embo J. V. 19 5951 2000
PubMed-ID: 11080142  |  Reference-DOI: 10.1093/EMBOJ/19.22.5951
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MALTOSE TRANSPORT PROTEIN MALK
    Chains: 1, 2
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PGG200
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: MALK
    Organism Scientific: THERMOCOCCUS LITORALIS
    Organism Taxid: 2265
    Synonym: MALK

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : 12
Biological Unit 1 (1x): 12
Biological Unit 2 (2x): 1 (2x)2 (2x)
Biological Unit 3 (1x): 1 (1x)2 (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 57)

Asymmetric Unit (6, 57)
No.NameCountTypeFull Name
1CL10Ligand/IonCHLORIDE ION
2DIO3Ligand/Ion1,4-DIETHYLENE DIOXIDE
3MG11Ligand/IonMAGNESIUM ION
4NA28Ligand/IonSODIUM ION
5NH43Ligand/IonAMMONIUM ION
6POP2Ligand/IonPYROPHOSPHATE 2-
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DIO3Ligand/Ion1,4-DIETHYLENE DIOXIDE
3MG-1Ligand/IonMAGNESIUM ION
4NA-1Ligand/IonSODIUM ION
5NH43Ligand/IonAMMONIUM ION
6POP2Ligand/IonPYROPHOSPHATE 2-
Biological Unit 2 (3, 10)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DIO6Ligand/Ion1,4-DIETHYLENE DIOXIDE
3MG-1Ligand/IonMAGNESIUM ION
4NA-1Ligand/IonSODIUM ION
5NH42Ligand/IonAMMONIUM ION
6POP2Ligand/IonPYROPHOSPHATE 2-
Biological Unit 3 (3, 5)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DIO3Ligand/Ion1,4-DIETHYLENE DIOXIDE
3MG-1Ligand/IonMAGNESIUM ION
4NA-1Ligand/IonSODIUM ION
5NH41Ligand/IonAMMONIUM ION
6POP1Ligand/IonPYROPHOSPHATE 2-

(-) Sites  (57, 57)

Asymmetric Unit (57, 57)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY 1:29 , LYS 1:183 , GLN 1:186 , ASP 1:208 , HOH 1:959BINDING SITE FOR RESIDUE NH4 1 373
02AC2SOFTWAREGLY 2:29 , LYS 2:183 , GLN 2:186 , ASP 2:208BINDING SITE FOR RESIDUE NH4 2 373
03AC3SOFTWAREALA 1:180 , LYS 1:184 , GLU 2:347 , HOH 2:631 , HOH 2:646BINDING SITE FOR RESIDUE NH4 2 374
04AC4SOFTWAREASP 2:293 , TYR 2:295 , ASP 2:356BINDING SITE FOR RESIDUE MG 2 375
05AC5SOFTWAREVAL 1:227 , VAL 1:236 , ALA 1:237 , ILE 1:240 , ARG 1:290BINDING SITE FOR RESIDUE CL 1 374
06AC6SOFTWAREVAL 2:227 , VAL 2:236 , ALA 2:237 , ILE 2:240 , ARG 2:290BINDING SITE FOR RESIDUE CL 2 376
07AC7SOFTWAREALA 1:180 , THR 1:205 , HOH 1:834 , HOH 1:858 , ILE 2:316 , GLU 2:347BINDING SITE FOR RESIDUE NA 2 377
08AC8SOFTWAREGLU 1:318 , ARG 2:179 , HOH 2:516BINDING SITE FOR RESIDUE CL 2 378
09AC9SOFTWARETHR 1:43 , ARG 1:47 , HOH 1:878 , SER 2:89 , LEU 2:92BINDING SITE FOR RESIDUE CL 1 375
10BC1SOFTWAREGLU 1:292 , MG 1:392 , GLY 2:321 , SER 2:322 , SER 2:341BINDING SITE FOR RESIDUE NA 1 376
11BC2SOFTWAREILE 1:316 , VAL 1:317 , GLU 1:347 , ALA 2:180 , THR 2:205 , HOH 2:516 , HOH 2:520BINDING SITE FOR RESIDUE NA 1 377
12BC3SOFTWAREGLU 2:292 , ASP 2:293 , LYS 2:359 , NA 2:388BINDING SITE FOR RESIDUE MG 2 379
13BC4SOFTWAREGLU 1:292 , ASP 1:293 , LYS 1:359 , NA 1:385BINDING SITE FOR RESIDUE MG 1 378
14BC5SOFTWARESER 2:38 , GLY 2:39 , HOH 2:545BINDING SITE FOR RESIDUE NA 2 380
15BC6SOFTWARELYS 1:11 , GLU 1:53 , HOH 1:841BINDING SITE FOR RESIDUE NA 1 379
16BC7SOFTWARETHR 2:17 , ARG 2:20 , ARG 2:215BINDING SITE FOR RESIDUE CL 2 381
17BC8SOFTWAREGLU 1:30 , HOH 1:970BINDING SITE FOR RESIDUE NA 1 380
18BC9SOFTWAREASP 2:229 , HOH 2:645BINDING SITE FOR RESIDUE NA 2 382
19CC1SOFTWAREASN 1:319 , ARG 1:324 , HOH 1:891 , MET 2:204 , PRO 2:224 , ASP 2:225BINDING SITE FOR RESIDUE NA 2 383
20CC2SOFTWAREARG 1:121 , HOH 1:874BINDING SITE FOR RESIDUE CL 1 381
21CC3SOFTWAREGLU 2:315BINDING SITE FOR RESIDUE NA 2 384
22CC4SOFTWARELYS 1:183 , THR 1:205 , HOH 1:858 , GLU 2:347 , HOH 2:525BINDING SITE FOR RESIDUE MG 2 385
23CC5SOFTWAREGLU 1:347 , HOH 1:863 , LYS 2:183 , THR 2:205 , HOH 2:520BINDING SITE FOR RESIDUE NA 1 382
24CC6SOFTWAREASP 1:296 , MET 1:298 , HOH 1:1017BINDING SITE FOR RESIDUE NA 1 383
25CC7SOFTWARELYS 1:79 , ASP 1:80 , LYS 2:11 , PHE 2:13 , GLU 2:53BINDING SITE FOR RESIDUE MG 2 386
26CC8SOFTWAREARG 1:324 , HOH 1:925 , HOH 1:978 , ASP 2:225 , NA 2:394BINDING SITE FOR RESIDUE MG 2 387
27CC9SOFTWAREGLN 1:59 , ASP 1:69 , GLU 1:71 , LYS 1:72BINDING SITE FOR RESIDUE MG 1 384
28DC1SOFTWAREASP 1:229 , LYS 1:359 , MG 1:378 , HOH 1:975BINDING SITE FOR RESIDUE NA 1 385
29DC2SOFTWAREGLU 1:181 , HOH 1:850BINDING SITE FOR RESIDUE NA 1 386
30DC3SOFTWAREASP 1:225 , HOH 1:918BINDING SITE FOR RESIDUE NA 1 387
31DC4SOFTWAREASP 1:225 , ARG 2:324 , SER 2:341BINDING SITE FOR RESIDUE NA 1 388
32DC5SOFTWAREASP 2:229 , MG 2:379 , NA 2:424 , HOH 2:639BINDING SITE FOR RESIDUE NA 2 388
33DC6SOFTWAREARG 1:209 , GLU 1:226 , HOH 1:922BINDING SITE FOR RESIDUE NA 1 389
34DC7SOFTWARETHR 2:43 , ASP 2:164BINDING SITE FOR RESIDUE MG 2 389
35DC8SOFTWAREGLU 2:181 , LYS 2:184BINDING SITE FOR RESIDUE NA 2 390
36DC9SOFTWAREHOH 1:928 , ASP 2:80BINDING SITE FOR RESIDUE NA 2 391
37EC1SOFTWAREGLU 2:30 , ARG 2:209BINDING SITE FOR RESIDUE NA 2 392
38EC2SOFTWAREASP 1:229 , HOH 1:1016BINDING SITE FOR RESIDUE NA 1 390
39EC3SOFTWARESER 2:223 , GLU 2:226BINDING SITE FOR RESIDUE MG 2 393
40EC4SOFTWAREARG 1:324 , SER 1:341 , ASP 2:225 , MG 2:387 , HOH 2:648BINDING SITE FOR RESIDUE NA 2 394
41EC5SOFTWAREARG 2:20 , ARG 2:215BINDING SITE FOR RESIDUE CL 2 395
42EC6SOFTWAREARG 1:344BINDING SITE FOR RESIDUE CL 1 391
43EC7SOFTWAREASP 1:229 , NA 1:376BINDING SITE FOR RESIDUE MG 1 392
44EC8SOFTWARESER 1:341 , GLU 1:342 , HOH 1:847 , HOH 2:544 , HOH 2:651BINDING SITE FOR RESIDUE MG 1 393
45EC9SOFTWAREALA 1:297 , ASP 1:352 , ARG 2:303BINDING SITE FOR RESIDUE CL 2 396
46FC1SOFTWAREGLU 1:131 , ARG 2:147BINDING SITE FOR RESIDUE NA 1 394
47FC2SOFTWAREASP 2:356 , LYS 2:359BINDING SITE FOR RESIDUE NA 2 397
48FC3SOFTWAREGLU 1:347 , ALA 2:180 , LYS 2:184BINDING SITE FOR RESIDUE NA 1 414
49FC4SOFTWAREASP 1:82 , ARG 1:156 , LYS 1:157BINDING SITE FOR RESIDUE NA 1 422
50FC5SOFTWAREASP 2:229 , NA 2:388 , HOH 2:544BINDING SITE FOR RESIDUE NA 2 424
51FC6SOFTWAREARG 2:121 , HOH 2:565BINDING SITE FOR RESIDUE CL 2 430
52FC7SOFTWAREGLU 2:54 , HOH 2:684BINDING SITE FOR RESIDUE NA 2 439
53FC8SOFTWARETYR 1:93 , PRO 2:37 , SER 2:38 , GLY 2:39 , CYS 2:40 , GLY 2:41 , LYS 2:42 , THR 2:43 , THR 2:44 , HOH 2:680BINDING SITE FOR RESIDUE POP 2 500
54FC9SOFTWAREPRO 1:37 , SER 1:38 , GLY 1:39 , CYS 1:40 , GLY 1:41 , LYS 1:42 , THR 1:43 , THR 1:44 , HOH 1:836 , TYR 2:93 , HIS 2:95BINDING SITE FOR RESIDUE POP 1 501
55GC1SOFTWARETRP 1:10 , ARG 1:57 , TRP 2:10 , ARG 2:57BINDING SITE FOR RESIDUE DIO 1 830
56GC2SOFTWAREGLY 1:14 , DIO 1:832 , SER 2:56BINDING SITE FOR RESIDUE DIO 1 831
57GC3SOFTWARESER 1:56 , DIO 1:831 , GLY 2:14 , HOH 2:510BINDING SITE FOR RESIDUE DIO 1 832

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1G29)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser 1:242 -Pro 1:243
2Ser 2:242 -Pro 2:243

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1G29)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TRANSPORTER_1PS00211 ABC transporters family signature.MALK_THELN140-154
 		  21:140-154
2:140-154
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TRANSPORTER_1PS00211 ABC transporters family signature.MALK_THELN140-154
 		  21:140-154
2:140-154
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TRANSPORTER_1PS00211 ABC transporters family signature.MALK_THELN140-154
 		  41:140-154
2:140-154
Biological Unit 3 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ABC_TRANSPORTER_1PS00211 ABC transporters family signature.MALK_THELN140-154
 		  21:140-154
2:140-154

(-) Exons   (0, 0)

(no "Exon" information available for 1G29)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 1 from PDB  Type:PROTEIN  Length:372
 aligned with MALK_THELN | Q9YGA6 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:372
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370  
           MALK_THELN     1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKIHIFDKTTGKAIF 372
               SCOP domains d1g2912 1:1-240 Maltose transport protein MalK, N-terminal domain                                                                                                                                                                               d1g2913 1:241-301                                            d1g2914 1:302-372 Maltose transport protein MalK, C-terminal domain     SCOP domains
               CATH domains 1g29101 1:1-244 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                1g29103 1:245-292,1:356-372                     -----------------1g29102 1:310-354                            -1g29103           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeeee..eeeeeeeeeeee...eeeee.....hhhhhhhhhhh.....eeeeee..eeeeehhhhee.hhhhh.eeee..........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh..hhhhhhhh.....eeeeeee....eee....eee.hhhhhhhhhhh.....eeeeeehhh.eee............eeeeeeeeeee....eeeeeee..eeeeeee..........eeeeee.hhhheeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1g29 1   1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVRLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKIHIFDKTTGKAIF 372
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370  


Chain 2 from PDB  Type:PROTEIN  Length:372
 aligned with MALK_THELN | Q9YGA6 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:372
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370  
           MALK_THELN     1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVHLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKIHIFDKTTGKAIF 372
               SCOP domains d1g2922 2:1-240 Maltose transport protein MalK, N-terminal domain                                                                                                                                                                               d1g2923 2:241-301                                            d1g2924 2:302-372 Maltose transport protein MalK, C-terminal domain     SCOP domains
               CATH domains 1g29201 2:1-244 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                1g29203 2:245-292,2:356-372                     -----------------1g29202 2:310-354                            -1g29203           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeee..eeeeeeeeeee....eeeee.....hhhhhhhhhhh.....eeeeee..eeeeehhhhee.hhhhh.eee.hhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhh.eeeeee..eeeeeehhhhhhhh..hhhhhhhh.....eeeeeee....eee....eee.hhhhhhhhhhh.....eeeeeehhh.eee............eeeeeeeeeee....eeeeeee..eeeeeee..........eeeeee.hhhheeee.....eee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------ABC_TRANSPORTER-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1g29 2   1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVRLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKIHIFDKTTGKAIF 372
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1G29)

(-) Gene Ontology  (15, 15)

Asymmetric Unit(hide GO term definitions)
Chain 1,2   (MALK_THELN | Q9YGA6)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016887    ATPase activity    Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016820    hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances    Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
    GO:0015423    maltose-transporting ATPase activity    Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005215    transporter activity    Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
biological process
    GO:0008643    carbohydrate transport    The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.
    GO:0015768    maltose transport    The directed movement of maltose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the catabolism of glycogen and starch.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0043190    ATP-binding cassette (ABC) transporter complex    A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    DIO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NH4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    POP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
    EC4  [ RasMol ]  +environment [ RasMol ]
    EC5  [ RasMol ]  +environment [ RasMol ]
    EC6  [ RasMol ]  +environment [ RasMol ]
    EC7  [ RasMol ]  +environment [ RasMol ]
    EC8  [ RasMol ]  +environment [ RasMol ]
    EC9  [ RasMol ]  +environment [ RasMol ]
    FC1  [ RasMol ]  +environment [ RasMol ]
    FC2  [ RasMol ]  +environment [ RasMol ]
    FC3  [ RasMol ]  +environment [ RasMol ]
    FC4  [ RasMol ]  +environment [ RasMol ]
    FC5  [ RasMol ]  +environment [ RasMol ]
    FC6  [ RasMol ]  +environment [ RasMol ]
    FC7  [ RasMol ]  +environment [ RasMol ]
    FC8  [ RasMol ]  +environment [ RasMol ]
    FC9  [ RasMol ]  +environment [ RasMol ]
    GC1  [ RasMol ]  +environment [ RasMol ]
    GC2  [ RasMol ]  +environment [ RasMol ]
    GC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ser 1:242 - Pro 1:243   [ RasMol ]  
    Ser 2:242 - Pro 2:243   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1g29
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  MALK_THELN | Q9YGA6
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  MALK_THELN | Q9YGA6
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1G29)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1G29)