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(-) Description

Title :  ASP128ALA VARIANT OF MOAC PROTEIN FROM E. COLI
 
Authors :  H. Schindelin, M. T. W. Liu, M. M. Wuebbens, K. V. Rajagopalan
Date :  09 Mar 00  (Deposition) - 20 Sep 00  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (6x)
Keywords :  Moac, Molybdenum Cofactor (Moco), Moco Biosynthesis, Moco Deficiency, Translation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. M. Wuebbens, M. T. Liu, K. Rajagopalan, H. Schindelin
Insights Into Molybdenum Cofactor Deficiency Provided By Th Crystal Structure Of The Molybdenum Cofactor Biosynthesis Protein Moac.
Structure Fold. Des. V. 8 709 2000
PubMed-ID: 10903949  |  Reference-DOI: 10.1016/S0969-2126(00)00157-X

(-) Compounds

Molecule 1 - MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Cellular Location: CYTOSOL
    Expression System Plasmid: PET 15B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1TLA1Ligand/IonL(+)-TARTARIC ACID
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1TLA6Ligand/IonL(+)-TARTARIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:75 , CYS A:76 , HIS A:77 , THR A:109 , LYS A:131 , HOH A:202 , HOH A:204BINDING SITE FOR RESIDUE TLA A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1EKS)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Asp A:46 -Gly A:47
2Gly A:140 -Pro A:141

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1EKS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1EKS)

(-) Exons   (0, 0)

(no "Exon" information available for 1EKS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:140
 aligned with MOAC_ECOLI | P0A738 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:142
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154  
           MOAC_ECOLI    15 MVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFK 156
               SCOP domains d1eksa_ A: Molybdenum cofactor biosynthesis protein C, MoaC                                                                                    SCOP domains
               CATH domains 1eksA00 A:15-156  [code=3.30.70.640, no name defined]                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeeeeeeee.hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.........eeeeeeeeehhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhh......ee...eeeee.--...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1eks A  15 MVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYAMCKAVQKDMVIGPVRLLAKS--KSGDFK 156
                                    24        34        44        54        64        74        84        94       104       114       124       134       144   |  |154  
                                                                                                                                                               148  |     
                                                                                                                                                                  151
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1EKS)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (MOAC_ECOLI | P0A738)
molecular function
    GO:0061597    obsolete cyclic pyranopterin monophosphate synthase activity    OBSOLETE Catalysis of the reaction GTP = cyclic pyranopterin phosphate + diphosphate.
biological process
    GO:0006777    Mo-molybdopterin cofactor biosynthetic process    The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.
    GO:0032324    molybdopterin cofactor biosynthetic process    The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.

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  1eks
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MOAC_ECOLI | P0A738: 1ekr 4pya 4pyd

(-) Related Entries Specified in the PDB File

1ekr MOAC