1CTO - JenaLib

Title :   NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGION OF MURINE GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR, MINIMIZED AVERAGE STRUCTURE

Authors :   K. Yamasaki, S. Naito, H. Anaguchi, T. Ohkubo, Y. Ota

Date :   25 Sep 96 (Deposition) - 22 Oct 97 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A

Keywords :   Binding Protein, Cytokine Receptor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Yamasaki, S. Naito, H. Anaguchi, T. Ohkubo, Y. Ota
Solution Structure Of An Extracellular Domain Containing The Wsxws Motif Of The Granulocyte Colony-Stimulating Factor Receptor And Its Interaction With Ligand.
Nat. Struct. Biol. V. 4 498 1997
PubMed-ID: 9187659 | Reference-DOI: 10.1038/NSB0697-498
(for further references see the PDB file header)

Compounds

Molecule 1 - GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMAL-P
	Expression System Taxid	:	562
	Fragment	:	C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGION
	Mutation	:	YES
	Organism Common	:	HOUSE MOUSE
	Organism Scientific	:	MUS MUSCULUS
	Organism Taxid	:	10090
	Other Details	:	EXPRESSED AS A FUSION PROTEIN WITH MALTOSE BINDING PROTEIN

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (2, 2)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:109
 aligned with CSF3R_MOUSE | P40223 from UniProtKB/Swiss-Prot  Length:837

    Alignment length:123
                                   220       230       240       250       260       270       280       290       300       310       320       330   
          CSF3R_MOUSE   211 GSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTMK 333
               SCOP domains d1c              toa_ A: Granulocyte colony-stimulating factor (GC-SF) receptor                                             SCOP domains
               CATH domains 1ct              oA00 A:1-109 Immunoglobulins                                                                               CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...--------------....eeee.............eeeeeee...........eeeeeee......eeeee........eeee......eeeeeeee...............eeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE FN3  PDB: -          ----FN3  PDB: A:12-107 UniProt: 236-331                                                             -- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 1cto A   1 GSS--------------LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTMK 109
                              |      -       | 6        16        26        36        46        56        66        76        86        96       106   
                              3              4

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

NMR Structure(hide GO term definitions)

Chain A (CSF3R_MOUSE | P40223)

molecular function
	GO:0004896	cytokine receptor activity	Combining with a cytokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0097186	amelogenesis	The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0019221	cytokine-mediated signaling pathway	A series of molecular signals initiated by the binding of a cytokine to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.
	GO:0030593	neutrophil chemotaxis	The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
	GO:0045637	regulation of myeloid cell differentiation	Any process that modulates the frequency, rate or extent of myeloid cell differentiation.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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