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(-) Description

Title :  TYROSINE PHENOL-LYASE FROM ERWINIA HERBICOLA
 
Authors :  B. Mikami, Y. Yamamoto, T. Katayama, H. Suzuki
Date :  18 Feb 00  (Deposition) - 09 Dec 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Lyase, Tyrosine Degradation, Pyridoxal 5'-Phosphate Dependent (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mikami, Y. Yamamoto, T. Katayama, H. Suzuki, H. Kumagai
The Structure Of Tyrosine Phenol-Lyase From Erwinia Herbicola
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TYROSINE PHENOL-LYASE
    Chains: A, B, C, D
    EC Number: 4.1.99.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PUC18
    Expression System Strain: JM101
    Expression System Taxid: 562
    Expression System Variant: TNA DEFICIENT
    Expression System Vector Type: PLASMID
    Organism Scientific: PANTOEA AGGLOMERANS PV. GYPSOPHILAE
    Organism Taxid: 48984
    Other Details: PYRIDOXAL 5'-PHOSPHATE LINK TO A 257, B 257, C 257 AND D 257
    Other Details - Source: RECOMBINANT GENE
    Strain: PV. GYPSOPHILAE
    Variant: AJ2985

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1PLP4Ligand/IonPYRIDOXAL-5'-PHOSPHATE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:98 , GLY A:99 , ARG A:100 , GLU A:103 , PHE A:123 , ASP A:214 , THR A:216 , ARG A:217 , SER A:254 , LYS A:257 , HOH A:543 , HOH A:682BINDING SITE FOR RESIDUE PLP A 1000
2AC2SOFTWAREGLN B:98 , GLY B:99 , ARG B:100 , GLU B:103 , PHE B:123 , ASP B:214 , THR B:216 , ARG B:217 , SER B:254 , LYS B:257 , HOH B:554BINDING SITE FOR RESIDUE PLP B 1000
3AC3SOFTWAREGLN C:98 , GLY C:99 , ARG C:100 , GLU C:103 , PHE C:123 , ASP C:214 , THR C:216 , ARG C:217 , SER C:254 , LYS C:257 , HOH C:767 , HOH C:811BINDING SITE FOR RESIDUE PLP C 1000
4AC4SOFTWAREGLN D:98 , GLY D:99 , ARG D:100 , GLU D:103 , PHE D:123 , ASP D:214 , THR D:216 , ARG D:217 , SER D:254 , LYS D:257 , HOH D:920BINDING SITE FOR RESIDUE PLP D 1000

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1C7G)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Val A:182 -Thr A:183
2Glu A:338 -Pro A:339
3Val B:182 -Thr B:183
4Glu B:338 -Pro B:339
5Val C:182 -Thr C:183
6Glu C:338 -Pro C:339
7Val D:182 -Thr D:183
8Glu D:338 -Pro D:339

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (4, 16)

Asymmetric/Biological Unit (4, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_TPL_ENTAG_001 *D157NTPL_ENTAG  ---  ---A/B/C/DD157N
2UniProtVAR_TPL_ENTAG_002 *F212YTPL_ENTAG  ---  ---A/B/C/DF212Y
3UniProtVAR_TPL_ENTAG_003 *R397STPL_ENTAG  ---  ---A/B/C/DR397S
4UniProtVAR_TPL_ENTAG_004 *V420ITPL_ENTAG  ---  ---A/B/C/DV420I
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 4)

Asymmetric/Biological Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BETA_ELIM_LYASEPS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site.TPL_ENTAG247-265
 
 
 		  4A:247-265
B:247-265
C:247-265
D:247-265

(-) Exons   (0, 0)

(no "Exon" information available for 1C7G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:456
 aligned with TPL_ENTAG | P31011 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      
            TPL_ENTAG     1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
               SCOP domains d1c7ga_ A: Tyrosine phenol-lyase                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -1c7gA01 A:2-57,A:311-453                                1c7gA02 A:58-310 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                         1c7gA01 A:2-57,A:311-453 Aspartate Aminotransferase, domain 1                                                                                  --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................hhhhhhhhhh....hhh..hhh...............hhhhhhhh.........hhhhhhhhhhhhh....eeeee..hhhhhhhhhhhh....eeeee....hhhhhhhhh..eeeee...hhhh.............hhhhhhhhhhh.hhheeeeeee............hhhhhhhhhhhhhh...eeee...hhhhhhhhhhh........hhhhhhhhhhh..eeeee..........eeeee..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...........eeeeehhhh.....hhh.hhhhhhhhhhhhh....eee.hhhh...............eeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee.....hhhh.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------Y----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------I------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1c7g A   1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      


Chain B from PDB  Type:PROTEIN  Length:456
 aligned with TPL_ENTAG | P31011 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      
            TPL_ENTAG     1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
               SCOP domains d1c7gb_ B: Tyrosine phenol-lyase                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -1c7gB01 B:2-57,B:311-453                                1c7gB02 B:58-310 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                         1c7gB01 B:2-57,B:311-453 Aspartate Aminotransferase, domain 1                                                                                  --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................hhhhhhhhhh....hhh..hhh...............hhhhhhhh.........hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeee....hhhhhhhhhh.eeeee...hhhh.............hhhhhhhhhhh.hhheeeeeee............hhhhhhhhhhhhhh..eeeeehhhhhhhhhhhhhh........hhhhhhhhhhh..eeeee..........eeeee..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...........eeeeehhhh.....hhh.hhhhhhhhhhhhh....eee.hhhh...............eeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee.....hhhh.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------Y----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------I------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1c7g B   1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      


Chain C from PDB  Type:PROTEIN  Length:456
 aligned with TPL_ENTAG | P31011 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      
            TPL_ENTAG     1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
               SCOP domains d1c7gc_ C: Tyrosine phenol-lyase                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -1c7gC01 C:2-57,C:311-453                                1c7gC02 C:58-310 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                         1c7gC01 C:2-57,C:311-453 Aspartate Aminotransferase, domain 1                                                                                  --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................hhhhhhhhhh....hhh..hhh...............hhhhhhhh.........hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeee....hhhhhhhhh..eeeee...hhhh.............hhhhhhhhhhh.hhheeeeeee...hhh......hhhhhhhhhhhhhh...eeee...hhhhhhhhhhh........hhhhhhhhhhh..eeeee..........eeeee..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...........eeeeehhhh.....hhh.hhhhhhhhhhhhh....eee.hhhh...............eeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee.....hhhh.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------Y----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------I------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1c7g C   1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      


Chain D from PDB  Type:PROTEIN  Length:456
 aligned with TPL_ENTAG | P31011 from UniProtKB/Swiss-Prot  Length:456

    Alignment length:456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450      
            TPL_ENTAG     1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
               SCOP domains d1c7gd_ D: Tyrosine phenol-lyase                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains -1c7gD01 D:2-57,D:311-453                                1c7gD02 D:58-310 Type I PLP-dependent aspartate aminotransferase-like (Major domain)                                                                                                                                                                         1c7gD01 D:2-57,D:311-453 Aspartate Aminotransferase, domain 1                                                                                  --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................hhhhhhhhhh....hhh..hhh...............hhhhhhhhh........hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeee....hhhhhhhhh..eeeee...hhhh.............hhhhhhhhhhh.hhheeeeeee............hhhhhhhhhhhhh....eeee...hhhhhhhhhhh........hhhhhhhhhhh..eeeee..........eeeee..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...........eeeeehhhh.....hhh.hhhhhhhhhhhhh....eee.hhhh...............eeeee.......hhhhhhhhhhhhhhhhhhhh...eeeee.....hhhh.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------N------------------------------------------------------Y----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------I------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------BETA_ELIM_LYASE    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1c7g D   1 MNYPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKEDIRGLTFVYEPKQLRFFTARFDFI 456
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1C7G)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (TPL_ENTAG | P31011)
molecular function
    GO:0016830    carbon-carbon lyase activity    Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0050371    tyrosine phenol-lyase activity    Catalysis of the reaction: L-tyrosine + H(2)O = NH(4)(+) + phenol + pyruvate.
biological process
    GO:0009072    aromatic amino acid family metabolic process    The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
    GO:0006520    cellular amino acid metabolic process    The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
    GO:0006570    tyrosine metabolic process    The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1c7g
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  4.1.99.2
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1C7G)

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