Chain A from PDB Type:PROTEIN Length:437
aligned with SYG_THET8 | P56206 from UniProtKB/Swiss-Prot Length:506
Alignment length:505
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501
SYG_THET8 2 PASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVGPVEDEASLAYLRPETAQGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPEELAHYAKATVDILYRFPHGLEELEGIANRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 506
SCOP domains d1atia2 A:1-394 Glycyl-tRNA synthetase (GlyRS) d1atia1 A:395-505 Glycyl-tRNA synthetase (GlyRS), C-terminal domain SCOP domains
CATH domains 1atiA01 A:1-374 Bira Bifunctional Protein; Domain 2 ------------------1atiA02 A:393-505 [code=3.40.50.800, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhh...eee..hhh......eee.hhhhhhhhhhhhhhhhhh......eeee....eee..hhhh..hhhh.eeee...--------------------------------------------------------------------....eeee..eeee......hhheeee....hhhhhhhhhhhhhhh.....eeeeeeeeee........hhh...eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh....hhheeeee...........eeeeeeeee..eeeeeeeeee...hhhhhh....................................eeeeeeeehhhhhhhhhhhheeeee.....eeeee...hhh....eeeee.....hhhhhhhhhhhhhhhhh....eeee....hhhhhhhhhh....eeeee.hhhh............eeeeee.....eeeeehhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ati A 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDN--------------------------------------------------------------------WTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 505
10 20 30 40 50 60 70 80 90 - - - - - - 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
90 159
Chain B from PDB Type:PROTEIN Length:436
aligned with SYG_THET8 | P56206 from UniProtKB/Swiss-Prot Length:506
Alignment length:505
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501
SYG_THET8 2 PASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFKTYVGPVEDEASLAYLRPETAQGIFVNFKNVLDATSRKLPFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPEELAHYAKATVDILYRFPHGLEELEGIANRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 506
SCOP domains d1atib2 B:1-394 Glycyl-tRNA synthetase (GlyRS) d1atib1 B:395-505 Glycyl-tRNA synthetase (GlyRS), C-terminal domain SCOP domains
CATH domains 1atiB01 B:1-374 Bira Bifunctional Protein; Domain 2 ------------------1atiB02 B:393-504 [code=3.40.50.800, no name defined] - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhh...eee..hhh......eee.hhhhhhhhhhhhhhhhhh......eeee....eeehhhhhh..hhhhh......---------------------------------------------------------------------...........eee......hhheeee....hhhhhhhhhhhhhhh.....eeeeeeeeee........hhh...eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh....hhheeeee...........eeeeeeeee..eeeeeeeeee...hhhhhh....................................eeeeeeeehhhhhhhhhhhheeeee.....eeeee...hhh....eeeee.....hhhhhhhhhhhhhhhhh....eeee....hhhhhhhhhh....eeeee.hhhh............eeeeee.....eeeeehhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ati B 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVD---------------------------------------------------------------------WTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRERLRW 505
10 20 30 40 50 60 70 80 |- - - - - - - 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500
89 159
Chain C from PDB Type:PROTEIN Length:37
SCOP domains ------------------------------------- SCOP domains
CATH domains ------------------------------------- CATH domains
Pfam domains ------------------------------------- Pfam domains
Sec.struct. author ..........hhhhhhhhh....hhhhhh........ Sec.struct. author
SAPs(SNPs) ------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------- PROSITE
Transcript ------------------------------------- Transcript
1ati C 91 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx 130
|||||||103|||||||113|||||||123|||||||
91-UNK||103-UNK||112-UNK||121-UNK||130-UNK
92-UNK||104-UNK||113-UNK||122-UNK|||
93-UNK||105-UNK||114-UNK||123-UNK||
94-UNK| 106-UNK| 115-UNK| 124-UNK|
95-UNK 107-UNK 116-UNK 125-UNK
96-UNK 108-UNK 117-UNK 126-UNK
97-UNK 109-UNK 118-UNK 127-UNK
98-UNK 110-UNK 119-UNK 128-UNK
99-UNK 111-UNK 120-UNK 129-UNK
Chain D from PDB Type:PROTEIN Length:16
SCOP domains ---------------- SCOP domains
CATH domains ---------------- CATH domains
Pfam domains ---------------- Pfam domains
Sec.struct. author ...hhh..hhhhhh.. Sec.struct. author
SAPs(SNPs) ---------------- SAPs(SNPs)
PROSITE ---------------- PROSITE
Transcript ---------------- Transcript
1ati D 99 xxxxxxxxxxxxxxxx 114
|||||||108||||||
||||||107-UNK|||
99-UNK||108-UNK||
100-UNK||109-UNK|
101-UNK| 110-UNK
102-UNK 111-UNK
103-UNK 112-UNK
104-UNK 113-UNK
105-UNK 114-UNK
106-UNK
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |