1AG9 - JenaLib

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TYR A:59 , GLU A:61 , HOH A:406 , HOH A:407 , ASP B:67 , HOH B:1001	BINDING SITE FOR RESIDUE CA A 200
02	AC2	SOFTWARE	ASP A:67 , HOH A:408 , TYR B:59 , GLU B:61 , HOH B:1002 , HOH B:1003	BINDING SITE FOR RESIDUE CA B 1000
03	AC3	SOFTWARE	BTB B:301 , HOH B:1004 , HOH B:1005	BINDING SITE FOR RESIDUE CA B 300
04	AC4	SOFTWARE	BTB A:351 , HOH A:409 , HOH A:410 , HOH A:411	BINDING SITE FOR RESIDUE CA A 350
05	AC5	SOFTWARE	HOH A:474 , ALA B:62 , HOH B:1053 , HOH B:1073	BINDING SITE FOR RESIDUE CL B 404
06	AC6	SOFTWARE	ALA A:62 , HOH A:422 , HOH A:512 , HOH A:538	BINDING SITE FOR RESIDUE CL A 405
07	AC7	SOFTWARE	GLU A:61 , HOH A:474 , HOH A:512 , ASP B:67 , HOH B:1116 , HOH B:1129	BINDING SITE FOR RESIDUE NA A 400
08	AC8	SOFTWARE	ASP A:67 , HOH A:484 , GLU B:61 , HOH B:1052 , HOH B:1074 , HOH B:1151	BINDING SITE FOR RESIDUE NA A 401
09	AC9	SOFTWARE	ASP B:43 , GLU B:96 , HOH B:1070 , HOH B:1075 , HOH B:1076 , HOH B:1085 , HOH B:1158	BINDING SITE FOR RESIDUE NA B 402
10	BC1	SOFTWARE	ALA B:46 , HOH B:1071 , HOH B:1091 , HOH B:1152 , HOH B:1156 , HOH B:1167	BINDING SITE FOR RESIDUE NA B 403
11	BC2	SOFTWARE	SER A:10 , ASP A:11 , THR A:12 , GLY A:13 , ASN A:14 , THR A:15 , PRO A:55 , THR A:56 , TRP A:57 , TYR A:58 , TYR A:59 , GLY A:60 , CYS A:88 , GLY A:89 , ASP A:90 , TYR A:94 , TYR A:97 , PHE A:98 , CYS A:99 , ASP A:147 , HOH A:440 , HOH A:446	BINDING SITE FOR RESIDUE FMN A 177
12	BC3	SOFTWARE	SER B:10 , ASP B:11 , THR B:12 , GLY B:13 , ASN B:14 , THR B:15 , PRO B:55 , THR B:56 , TRP B:57 , TYR B:58 , TYR B:59 , GLY B:60 , CYS B:88 , GLY B:89 , ASP B:90 , TYR B:94 , TYR B:97 , PHE B:98 , CYS B:99 , ASP B:147 , HOH B:1006 , HOH B:1028	BINDING SITE FOR RESIDUE FMN B 177
13	BC4	SOFTWARE	ARG B:148 , GLU B:151 , CA B:300 , HOH B:1004 , HOH B:1005 , HOH B:1162	BINDING SITE FOR RESIDUE BTB B 301
14	BC5	SOFTWARE	ASN A:17 , GLU A:146 , CA A:350 , HOH A:409 , HOH A:410 , HOH A:411 , HOH A:471 , HOH A:475 , SER B:10 , ASP B:11 , GLY B:13 , GLU B:16 , HOH B:1032 , HOH B:1041	BINDING SITE FOR RESIDUE BTB A 351
15	FMA	UNKNOWN	FMN A:177	FMN BINDING SITE.
16	FMB	UNKNOWN	FMN B:177	FMN BINDING SITE.

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:175
 aligned with FLAV_ECOLI | P61949 from UniProtKB/Swiss-Prot  Length:176

    Alignment length:175
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171     
           FLAV_ECOLI     2 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA 176
               SCOP domains d1ag9a_ A: Flavodoxin                                                                                                                                                           SCOP domains
               CATH domains 1ag9A00 A:2-176  [code=3.40.50.360, no name defined]                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee....hhhhhhhhhhhhh....eeeeehhh..hhhhh...eeeeee.........hhhhhhhhhhhh......eeeeeee...........hhhhhhhhhh.....eee........................eee.....hhhhhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --FLAVODOXIN_LIKE  PDB: A:4-165 UniProt: 4-165                                                                                                                      ----------- PROSITE (1)
                PROSITE (2) ----FLAVODOXIN       ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ag9 A   2 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA 176
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

Chain B from PDB  Type:PROTEIN  Length:175
 aligned with FLAV_ECOLI | P61949 from UniProtKB/Swiss-Prot  Length:176

    Alignment length:175
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171     
           FLAV_ECOLI     2 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA 176
               SCOP domains d1ag9b_ B: Flavodoxin                                                                                                                                                           SCOP domains
               CATH domains 1ag9B00 B:2-176  [code=3.40.50.360, no name defined]                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....hhhhhhhhhhhhh....eeeeehhh..hhhhh...eeeee..........hhhhhhhhhhhh......eeeeeee...........hhhhhhhhhh.....eee........................eee.....hhhhhhhhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) --FLAVODOXIN_LIKE  PDB: B:4-165 UniProt: 4-165                                                                                                                      ----------- PROSITE (1)
                PROSITE (2) ----FLAVODOXIN       ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ag9 B   2 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA 176
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (FLAV_ECOLI | P61949)

molecular function
	GO:0010181	FMN binding	Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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	1ag9
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 14)

Sites (16, 16)