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1AG9
Asym. Unit
Info
Asym.Unit (73 KB)
Biol.Unit 1 (68 KB)
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(1)
Title
:
FLAVODOXINS THAT ARE REQUIRED FOR ENZYME ACTIVATION: THE STRUCTURE OF OXIDIZED FLAVODOXIN FROM ESCHERICHIA COLI AT 1.8 ANGSTROMS RESOLUTION.
Authors
:
D. M. Hoover, M. L. Ludwig
Date
:
04 Apr 97 (Deposition) - 24 Dec 97 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Electron Transport, Reductive Activation, Flavodoxin, Escherichia Coli
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. M. Hoover, M. L. Ludwig
A Flavodoxin That Is Required For Enzyme Activation: The Structure Of Oxidized Flavodoxin From Escherichia Coli At 1. 8 A Resolution.
Protein Sci. V. 6 2525 1997
(for further references see the
PDB file header
)
[
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Hetero Components
(5, 14)
Info
All Hetero Components
1a: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-... (BTBa)
1b: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-... (BTBb)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: FLAVIN MONONUCLEOTIDE (FMNa)
4b: FLAVIN MONONUCLEOTIDE (FMNb)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BTB
2
Ligand/Ion
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
2
CA
4
Ligand/Ion
CALCIUM ION
3
CL
2
Ligand/Ion
CHLORIDE ION
4
FMN
2
Ligand/Ion
FLAVIN MONONUCLEOTIDE
5
NA
4
Ligand/Ion
SODIUM ION
[
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]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: FMA (UNKNOWN)
16: FMB (UNKNOWN)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:59 , GLU A:61 , HOH A:406 , HOH A:407 , ASP B:67 , HOH B:1001
BINDING SITE FOR RESIDUE CA A 200
02
AC2
SOFTWARE
ASP A:67 , HOH A:408 , TYR B:59 , GLU B:61 , HOH B:1002 , HOH B:1003
BINDING SITE FOR RESIDUE CA B 1000
03
AC3
SOFTWARE
BTB B:301 , HOH B:1004 , HOH B:1005
BINDING SITE FOR RESIDUE CA B 300
04
AC4
SOFTWARE
BTB A:351 , HOH A:409 , HOH A:410 , HOH A:411
BINDING SITE FOR RESIDUE CA A 350
05
AC5
SOFTWARE
HOH A:474 , ALA B:62 , HOH B:1053 , HOH B:1073
BINDING SITE FOR RESIDUE CL B 404
06
AC6
SOFTWARE
ALA A:62 , HOH A:422 , HOH A:512 , HOH A:538
BINDING SITE FOR RESIDUE CL A 405
07
AC7
SOFTWARE
GLU A:61 , HOH A:474 , HOH A:512 , ASP B:67 , HOH B:1116 , HOH B:1129
BINDING SITE FOR RESIDUE NA A 400
08
AC8
SOFTWARE
ASP A:67 , HOH A:484 , GLU B:61 , HOH B:1052 , HOH B:1074 , HOH B:1151
BINDING SITE FOR RESIDUE NA A 401
09
AC9
SOFTWARE
ASP B:43 , GLU B:96 , HOH B:1070 , HOH B:1075 , HOH B:1076 , HOH B:1085 , HOH B:1158
BINDING SITE FOR RESIDUE NA B 402
10
BC1
SOFTWARE
ALA B:46 , HOH B:1071 , HOH B:1091 , HOH B:1152 , HOH B:1156 , HOH B:1167
BINDING SITE FOR RESIDUE NA B 403
11
BC2
SOFTWARE
SER A:10 , ASP A:11 , THR A:12 , GLY A:13 , ASN A:14 , THR A:15 , PRO A:55 , THR A:56 , TRP A:57 , TYR A:58 , TYR A:59 , GLY A:60 , CYS A:88 , GLY A:89 , ASP A:90 , TYR A:94 , TYR A:97 , PHE A:98 , CYS A:99 , ASP A:147 , HOH A:440 , HOH A:446
BINDING SITE FOR RESIDUE FMN A 177
12
BC3
SOFTWARE
SER B:10 , ASP B:11 , THR B:12 , GLY B:13 , ASN B:14 , THR B:15 , PRO B:55 , THR B:56 , TRP B:57 , TYR B:58 , TYR B:59 , GLY B:60 , CYS B:88 , GLY B:89 , ASP B:90 , TYR B:94 , TYR B:97 , PHE B:98 , CYS B:99 , ASP B:147 , HOH B:1006 , HOH B:1028
BINDING SITE FOR RESIDUE FMN B 177
13
BC4
SOFTWARE
ARG B:148 , GLU B:151 , CA B:300 , HOH B:1004 , HOH B:1005 , HOH B:1162
BINDING SITE FOR RESIDUE BTB B 301
14
BC5
SOFTWARE
ASN A:17 , GLU A:146 , CA A:350 , HOH A:409 , HOH A:410 , HOH A:411 , HOH A:471 , HOH A:475 , SER B:10 , ASP B:11 , GLY B:13 , GLU B:16 , HOH B:1032 , HOH B:1041
BINDING SITE FOR RESIDUE BTB A 351
15
FMA
UNKNOWN
FMN A:177
FMN BINDING SITE.
16
FMB
UNKNOWN
FMN B:177
FMN BINDING SITE.
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: FLAVODOXIN_LIKE (A:4-165,B:4-165)
2: FLAVODOXIN (A:6-22,B:6-22)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FLAVODOXIN_LIKE
PS50902
Flavodoxin-like domain profile.
FLAV_ECOLI
4-165
2
A:4-165
B:4-165
2
FLAVODOXIN
PS00201
Flavodoxin signature.
FLAV_ECOLI
6-22
2
A:6-22
B:6-22
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1ag9a_ (A:)
1b: SCOP_d1ag9b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Flavoproteins
(208)
Family
:
Flavodoxin-related
(81)
Protein domain
:
Flavodoxin
(65)
Escherichia coli [TaxId: 562]
(2)
1a
d1ag9a_
A:
1b
d1ag9b_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1ag9A00 (A:2-176)
1b: CATH_1ag9B00 (B:2-176)
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Organisms
(
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.360, no name defined]
(150)
Escherichia coli. Organism_taxid: 562. Strain: dhalpha.
(2)
1a
1ag9A00
A:2-176
1b
1ag9B00
B:2-176
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Pfam Domains
(0, 0)
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all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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