1AC0 - JenaLib

NMR Structure (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	BGC A:2 , GLC A:7 , TRP A:590	BINDING SITE FOR RESIDUE GLC A 1
02	AC2	SOFTWARE	GLC A:1 , GLC A:3 , TRP A:543 , GLU A:544 , THR A:545 , TRP A:590	BINDING SITE FOR RESIDUE BGC A 2
03	AC3	SOFTWARE	BGC A:2 , GLC A:4 , TRP A:543 , GLU A:544	BINDING SITE FOR RESIDUE GLC A 3
04	AC4	SOFTWARE	GLC A:3 , BGC A:5	BINDING SITE FOR RESIDUE GLC A 4
05	AC5	SOFTWARE	GLC A:4 , GLO A:6 , SER A:536 , TRP A:543	BINDING SITE FOR RESIDUE BGC A 5
06	AC6	SOFTWARE	BGC A:5 , GLC A:7 , TRP A:543	BINDING SITE FOR RESIDUE GLO A 6
07	AC7	SOFTWARE	GLC A:1 , GLO A:6	BINDING SITE FOR RESIDUE GLC A 7
08	AC8	SOFTWARE	TYR A:556 , THR A:557 , SER A:558 , PRO A:561 , LEU A:562 , GLC A:618B , GLC A:623B	BINDING SITE FOR RESIDUE GLC A 617B
09	AC9	SOFTWARE	GLC A:617B , GLC A:619B , GLC A:620B , GLC A:623B	BINDING SITE FOR RESIDUE GLC A 618B
10	BC1	SOFTWARE	GLC A:618B , GLC A:620B , GLC A:621B , GLC A:622B	BINDING SITE FOR RESIDUE GLC A 619B
11	BC2	SOFTWARE	TYR A:527 , SER A:558 , GLC A:618B , GLC A:619B , GLC A:621B	BINDING SITE FOR RESIDUE GLC A 620B
12	BC3	SOFTWARE	GLC A:619B , GLC A:620B , GLC A:622B	BINDING SITE FOR RESIDUE GLC A 621B
13	BC4	SOFTWARE	GLC A:619B , GLC A:621B , GLC A:623B	BINDING SITE FOR RESIDUE GLC A 622B
14	BC5	SOFTWARE	ALA A:523 , TYR A:556 , PRO A:561 , LEU A:562 , GLC A:617B , GLC A:618B , GLC A:622B	BINDING SITE FOR RESIDUE GLC A 623B

SS Bonds (1, 1)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:108
 aligned with AMYG_ASPAW | P69327 from UniProtKB/Swiss-Prot  Length:640

    Alignment length:108
                                   542       552       562       572       582       592       602       612       622       632        
           AMYG_ASPAW   533 CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR 640
               SCOP domains d1ac0a_ A: Glucoamylase, granular starch-binding domain                                                      SCOP domains
               CATH domains 1ac0A00 A:509-616 Immunoglobulins                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeee......eeeeeee........hhh.eeee........eeeeeeeeeee.eeeeeeeeee......eee...............eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) CBM20  PDB: A:509-616 UniProt: 533-640                                                                       PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 1ac0 A 509 CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR 616
                                   518       528       538       548       558       568       578       588       598       608

Chain A from PDB  Type:PROTEIN  Length:108
 aligned with AMYG_ASPNG | P69328 from UniProtKB/Swiss-Prot  Length:640

    Alignment length:108
                                   542       552       562       572       582       592       602       612       622       632        
           AMYG_ASPNG   533 CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR 640
               SCOP domains d1ac0a_ A: Glucoamylase, granular starch-binding domain                                                      SCOP domains
               CATH domains 1ac0A00 A:509-616 Immunoglobulins                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeeeeee......eeeeeee........hhh.eeee........eeeeeeeeeee.eeeeeeeeee......eee...............eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE CBM20  PDB: A:509-616 UniProt: 533-640                                                                       PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 1ac0 A 509 CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR 616
                                   518       528       538       548       558       568       578       588       598       608

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (11, 21)

NMR Structure(hide GO term definitions)

Chain A (AMYG_ASPAW | P69327)

molecular function
	GO:0030246	carbohydrate binding	Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0004339	glucan 1,4-alpha-glucosidase activity	Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:2001070	starch binding	Interacting selectively and non-covalently with starch.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0000272	polysaccharide catabolic process	The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
	GO:0005976	polysaccharide metabolic process	The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

Chain A (AMYG_ASPNG | P69328)

molecular function
	GO:0030246	carbohydrate binding	Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0004339	glucan 1,4-alpha-glucosidase activity	Catalysis of the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:2001070	starch binding	Interacting selectively and non-covalently with starch.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0000272	polysaccharide catabolic process	The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
	GO:0005976	polysaccharide metabolic process	The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
cellular component
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

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	1ac0
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 14)

Sites (14, 14)